Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 4.1e-136 488.0 242 100.0
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 3.0e-131 471.9 242 97.5
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 2.6e-114 415.6 242 84.7
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 7.5e-114 414.1 243 85.2
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 2.2e-113 412.5 243 84.8
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 2.7e-111 405.6 243 83.5
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 7.3e-93 344.4 252 70.6
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 3.2e-88 328.9 242 69.4
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 2.1e-87 326.2 245 66.9
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 3.5e-87 325.5 246 68.3
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 8.7e-86 320.9 245 68.2
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 8.7e-86 320.9 244 68.4
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 8.7e-86 320.9 244 66.4
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.9e-85 319.7 247 67.6
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 9.6e-85 317.4 257 65.8
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 9.6e-85 317.4 236 68.2
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 9.6e-85 317.4 236 68.2
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 1.6e-84 316.6 251 64.5
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 2.8e-84 315.8 245 65.3
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 4.8e-84 315.1 216 73.1
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 8.1e-84 314.3 248 65.3
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 8.1e-84 314.3 242 66.1
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 8.1e-84 314.3 244 64.3
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.8e-83 313.2 242 65.3
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 4.0e-83 312.0 242 67.8
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 5.3e-83 311.6 242 64.9
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 1.2e-82 310.5 246 65.4
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 7.6e-82 307.8 237 67.5
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 2.9e-81 305.8 244 66.0
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.1e-80 303.9 242 62.4
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 7.1e-80 301.2 236 64.8
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 7.1e-80 301.2 241 66.8
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 9.3e-80 300.8 240 65.4
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 2.7e-79 299.3 247 64.4
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.5e-79 298.9 253 61.7
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 1.3e-78 297.0 241 64.7
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 2.3e-78 296.2 245 62.4
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 2.3e-78 296.2 257 61.9
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 3.0e-78 295.8 248 63.3
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 3.0e-78 295.8 203 71.9
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 6.6e-78 294.7 289 56.1
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 6.6e-78 294.7 242 63.2
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 6.6e-78 294.7 242 63.6
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 3.3e-77 292.4 221 64.7
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 3.3e-77 292.4 224 65.6
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 4.3e-77 292.0 236 64.0
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 5.6e-77 291.6 168 81.0
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 5.6e-77 291.6 221 67.4
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.6e-76 290.0 242 61.6
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 2.1e-76 289.7 260 59.6
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 2.1e-76 289.7 219 65.8
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 4.8e-76 288.5 218 67.0
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 6.2e-76 288.1 220 66.4
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 8.1e-76 287.7 248 62.9
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 8.1e-76 287.7 248 62.9
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.1e-75 287.3 245 60.0
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.4e-75 287.0 205 69.3
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 2.4e-75 286.2 217 66.8
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 1.2e-74 283.9 210 68.1
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.5e-74 283.5 236 63.1
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 1.5e-74 283.5 222 64.9
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 2.0e-74 283.1 182 73.1
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 4.5e-74 282.0 251 60.2
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 4.5e-74 282.0 173 77.5
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 7.6e-74 281.2 236 62.7
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 7.6e-74 281.2 236 62.7
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 9.9e-74 280.8 244 61.1
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 1.7e-73 280.0 175 74.3
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 2.2e-73 279.6 239 59.8
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 2.9e-73 279.3 198 70.2
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.8e-73 278.9 209 65.6
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 3.8e-73 278.9 209 65.6
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 3.8e-73 278.9 246 61.4
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 4.9e-73 278.5 198 69.2
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 4.9e-73 278.5 231 61.9
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 6.4e-73 278.1 236 62.3
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 6.4e-73 278.1 236 62.3
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 6.4e-73 278.1 239 61.5
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.1e-72 277.3 273 55.7
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 1.9e-72 276.6 242 60.7
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 1.9e-72 276.6 242 60.7
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 1.9e-72 276.6 206 67.5
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.9e-72 276.6 209 66.5
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 2.4e-72 276.2 237 60.8
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 2.4e-72 276.2 164 78.7
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 7.1e-72 274.6 207 66.7
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 7.1e-72 274.6 244 62.3
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 9.3e-72 274.2 160 76.9
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 9.3e-72 274.2 197 69.0
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 1.2e-71 273.9 182 69.8
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.7e-71 272.7 248 58.1
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 2.7e-71 272.7 269 55.8
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 3.5e-71 272.3 247 59.1
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 1.8e-70 270.0 212 64.2
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 8.1e-68 261.2 269 53.2
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 1.0e-65 254.2 169 72.8
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 3.9e-62 242.3 165 72.7
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.1e-61 240.7 193 66.3
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 4.3e-61 238.8 163 70.6
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 5.3e-59 231.9 206 56.3
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 4.5e-58 228.8 208 58.2
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 2.1e-55 219.9 222 53.2
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 2.7e-55 219.5 194 57.2
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 1.5e-53 213.8 189 56.1
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 7.4e-53 211.5 130 77.7
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 4.1e-51 205.7 110 86.4
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 1.9e-48 196.8 131 70.2
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.5e-45 187.2 132 67.4
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 7.4e-45 184.9 147 63.9
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 2.6e-42 176.4 150 62.0
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.0e-38 164.5 153 58.2
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 3.7e-36 156.0 90 78.9
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.5e-32 144.1 112 62.5
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 7.0e-27 125.2 91 64.8
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 3.5e-26 122.9 170 41.2
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.5e-24 117.5 114 58.8
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 4.0e-22 109.4 54 92.6
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 1.7e-17 94.0 99 47.5
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 2.5e-16 90.1 50 80.0
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 1.8e-14 84.0 56 69.6
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 1.6e-10 70.9 38 73.7
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 2.5e-08 63.5 71 46.5
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 2.1e-07 60.5 31 87.1


User provided reference genes

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