Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000062g0600 Nicotiana tabacum HOM05D000851 ORTHO05D003049 5.7e-167 590.9 306 100.0
Nitab4.5_0000916g0120 Nicotiana tabacum HOM05D000851 ORTHO05D003049 2.0e-63 246.9 277 54.2
Nitab4.5_0010274g0010 Nicotiana tabacum HOM05D000851 ORTHO05D003049 5.1e-59 232.3 282 52.5
Peaxi162Scf00723g00421 Petunia axillaris HOM05D000851 ORTHO05D003049 2.8e-49 199.9 307 44.3
Peaxi162Scf00376g00130 Petunia axillaris HOM05D000851 ORTHO05D003049 1.7e-41 174.1 241 44.0
Nitab4.5_0000089g0110 Nicotiana tabacum HOM05D000851 ORTHO05D003049 1.1e-32 144.8 295 37.6
CAN.G699.2 Capsicum annuum HOM05D000851 ORTHO05D003049 1.3e-30 137.9 298 37.9
PGSC0003DMG400029521 Solanum tuberosum HOM05D000851 ORTHO05D003049 1.6e-28 131.0 204 44.6
Sopen04g003000 Solanum pennellii HOM05D000851 ORTHO05D003049 3.1e-24 116.7 289 35.3
Solyc04g007870.3 Solanum lycopersicum HOM05D000851 ORTHO05D003049 9.1e-24 115.2 200 44.0
Cc11_g08230 Coffea canephora HOM05D000851 ORTHO05D003049 5.9e-23 112.5 265 34.0
Actinidia12375 Actinidia chinensis HOM05D000851 ORTHO05D003049 1.5e-21 107.8 236 35.2
Actinidia36645 Actinidia chinensis HOM05D000851 ORTHO05D003049 1.5e-21 107.8 229 34.5
Dinv18616 Davidia involucrata HOM05D000851 ORTHO05D003049 5.5e-21 105.9 303 30.0
Dinv26232 Davidia involucrata HOM05D000851 ORTHO05D003049 5.5e-21 105.9 303 30.0
Hma1.2p1_0330F.1_g127460 Hydrangea macrophylla HOM05D000851 ORTHO05D003049 1.6e-20 104.4 300 31.0
Nitab4.5_0000135g0030 Nicotiana tabacum HOM05D000851 ORTHO05D003049 4.7e-20 102.8 271 35.1
Dinv28048 Davidia involucrata HOM05D000851 ORTHO05D003049 8.8e-19 98.6 299 31.4
CSS0019644 Camellia sinensis var. sinensis HOM05D000851 ORTHO05D003049 1.2e-18 98.2 318 29.9
Lj6A742G69 Lonicera japonica HOM05D000851 ORTHO05D003049 2.0e-18 97.4 270 33.0
CAN.G1241.14 Capsicum annuum HOM05D000851 ORTHO05D003049 4.4e-18 96.3 162 40.7
MSTRG.13607 Avicennia marina HOM05D000851 ORTHO05D003049 1.1e-16 91.7 264 32.6
Migut.E00449 Erythranthe guttata HOM05D000851 ORTHO05D003049 5.4e-16 89.4 221 33.9
Lj3C866T18 Lonicera japonica HOM05D000851 ORTHO05D003049 7.0e-16 89.0 231 30.7
CSS0010645 Camellia sinensis var. sinensis HOM05D000851 ORTHO05D003049 1.6e-15 87.8 349 28.9
vmacro10670 Vaccinium macrocarpon HOM05D000851 ORTHO05D003049 1.6e-15 87.8 311 27.3
Duzib248G0058 Durio zibethinus HOM05D000851 ORTHO05D003049 1.7e-14 84.3 339 27.4
Thecc.02G287900 Theobroma cacao HOM05D000851 ORTHO05D003049 5.0e-14 82.8 268 29.5
SGA_v2.0_scaffold151G36741 Striga asiatica HOM05D000851 ORTHO05D003049 2.5e-13 80.5 254 31.5
Cfa014984 Carpinus fangiana HOM05D000851 ORTHO05D003049 7.2e-13 79.0 105 37.1
CiPaw.05G193600 Carya illinoinensis HOM05D000851 ORTHO05D003049 1.2e-12 78.2 272 26.5
Oeu014043.1 Olea europaea HOM05D000851 ORTHO05D003049 2.1e-12 77.4 245 32.7
SalBow2G0267 Salvia bowleyana HOM05D000851 ORTHO05D003049 2.8e-12 77.0 228 32.0
Potri.008G132200 Populus trichocarpa HOM05D000851 ORTHO05D003049 6.1e-12 75.9 264 27.3
MBI12_g08775_MAGBIO Magnolia biondii HOM05D000851 ORTHO05D003049 1.4e-11 74.7 174 31.6
DCAR_030242 Daucus carota HOM05D000851 ORTHO05D003049 1.8e-11 74.3 246 29.3
Potri.010G109900 Populus trichocarpa HOM05D000851 ORTHO05D003049 2.3e-11 73.9 258 27.9
Haze_10939 Corylus avellana HOM05D000851 ORTHO05D003049 3.0e-11 73.6 153 34.0
Duzib251G0412 Durio zibethinus HOM05D000851 ORTHO05D003049 3.0e-11 73.6 144 34.0
MSTRG.2148 Avicennia marina HOM05D000851 ORTHO05D003049 4.0e-11 73.2 273 29.7
Cpa.g.sc2.234 Carica papaya HOM05D000851 ORTHO05D003049 5.2e-11 72.8 93 43.0
Lsat_1_v5_gn_8_44360 Lactuca sativa HOM05D000851 ORTHO05D003049 1.5e-10 71.2 292 26.7
QL03p033946 Quercus lobata HOM05D000851 ORTHO05D003049 1.5e-10 71.2 159 30.8
COL.COLO4_13096 Corchorus olitorius HOM05D000851 ORTHO05D003049 2.6e-10 70.5 260 27.7
Sabra08G0100800 Salix brachista HOM05D000851 ORTHO05D003049 2.6e-10 70.5 264 27.3
Prupe.1G330400 Prunus persica HOM05D000851 ORTHO05D003049 4.4e-10 69.7 89 41.6
Ciclev10014119m.g Citrus clementina HOM05D000851 ORTHO05D003049 1.3e-09 68.2 134 30.6
Sabra10G0080300 Salix brachista HOM05D000851 ORTHO05D003049 1.7e-09 67.8 260 25.8
TAR371G0372 Trochodendron aralioides HOM05D000851 ORTHO05D003049 2.9e-09 67.0 158 31.6
Duzib268G0392 Durio zibethinus HOM05D000851 ORTHO05D003049 3.7e-09 66.6 89 39.3
Sed0017331 Sechium edule HOM05D000851 ORTHO05D003049 6.3e-09 65.9 168 29.8
ECA233G0179 Erigeron canadensis HOM05D000851 ORTHO05D003049 8.3e-09 65.5 210 27.6
arahy.Tifrunner.gnm1.ann1.GY5DEF Arachis hypogaea HOM05D000851 ORTHO05D003049 1.4e-08 64.7 252 27.8
Gohir.D02G142400 Gossypium hirsutum HOM05D000851 ORTHO05D003049 2.4e-08 63.9 78 39.7
Rhsim09G0093500 Rhododendron simsii HOM05D000851 ORTHO05D003049 2.4e-08 63.9 111 35.1
TAR629G0701 Trochodendron aralioides HOM05D000851 ORTHO05D003049 2.4e-08 63.9 158 31.6
MD13G1021300 Malus domestica HOM05D000851 ORTHO05D003049 3.2e-08 63.5 284 29.6
arahy.Tifrunner.gnm1.ann1.I9FPTI Arachis hypogaea HOM05D000851 ORTHO05D003049 4.1e-08 63.2 250 26.4
Gorai.005G159900 Gossypium raimondii HOM05D000851 ORTHO05D003049 4.1e-08 63.2 78 39.7
Manes.01G118000 Manihot esculenta HOM05D000851 ORTHO05D003049 4.1e-08 63.2 237 26.2
Potri.017G129200 Populus trichocarpa HOM05D000851 ORTHO05D003049 4.1e-08 63.2 50 52.0
Lsat_1_v5_gn_3_55560 Lactuca sativa HOM05D000851 ORTHO05D003049 7.0e-08 62.4 144 28.5
Potri.004G087600 Populus trichocarpa HOM05D000851 ORTHO05D003049 9.2e-08 62.0 149 31.5
HanXRQChr12g0363611 Helianthus annuus HOM05D000851 ORTHO05D003049 1.2e-07 61.6 318 27.7
TWI77G0794 Tripterygium wilfordii HOM05D000851 ORTHO05D003049 1.2e-07 61.6 242 29.8
Haze_14259 Corylus avellana HOM05D000851 ORTHO05D003049 2.0e-07 60.8 192 29.2
Atru.chr11.638 Acer truncatum HOM05D000851 ORTHO05D003049 2.7e-07 60.5 284 25.4
ClCG01G006360 Citrullus lanatus HOM05D000851 ORTHO05D003049 2.7e-07 60.5 242 27.3
Sabra04G0058500 Salix brachista HOM05D000851 ORTHO05D003049 3.5e-07 60.1 50 52.0
VMungo0647G2444 Vigna mungo HOM05D000851 ORTHO05D003049 3.5e-07 60.1 249 27.3
Lj4g0012513 Lotus japonicus HOM05D000851 ORTHO05D003049 4.6e-07 59.7 110 31.8
SGA_v2.0_scaffold59G20696 Striga asiatica HOM05D000851 ORTHO05D003049 4.6e-07 59.7 246 29.3
Cfa007816 Carpinus fangiana HOM05D000851 ORTHO05D003049 7.8e-07 58.9 200 28.0
Manes.15G131400 Manihot esculenta HOM05D000851 ORTHO05D003049 7.8e-07 58.9 77 40.3
Oeu059627.1 Olea europaea HOM05D000851 ORTHO05D003049 7.8e-07 58.9 262 25.6
TAR622G1439 Trochodendron aralioides HOM05D000851 ORTHO05D003049 7.8e-07 58.9 115 33.0
VMungo0251G2314 Vigna mungo HOM05D000851 ORTHO05D003049 1.0e-06 58.5 103 31.1
Gohir.A03G119100 Gossypium hirsutum HOM05D000851 ORTHO05D003049 1.3e-06 58.2 188 29.8
Gohir.A01G150000 Gossypium hirsutum HOM05D000851 ORTHO05D003049 1.7e-06 57.8 113 30.1
LjContig00141g0020815 Lotus japonicus HOM05D000851 ORTHO05D003049 2.3e-06 57.4 251 25.9
FvH4_4g34051 Fragaria vesca HOM05D000851 ORTHO05D003049 3.9e-06 56.6 248 27.4
FAN12G2731 Fragaria x ananassa HOM05D000851 ORTHO05D003049 3.9e-06 56.6 248 27.4
Gorai.002G176500 Gossypium raimondii HOM05D000851 ORTHO05D003049 3.9e-06 56.6 80 36.2
Lalb_Chr07g0187751 Lupinus albus HOM05D000851 ORTHO05D003049 5.0e-06 56.2 329 22.5
Manes.17G080700 Manihot esculenta HOM05D000851 ORTHO05D003049 6.6e-06 55.8 144 29.2
QL93p0100_0473 Quercus lobata HOM05D000851 ORTHO05D003049 6.6e-06 55.8 62 46.8


User provided reference genes

Program Settings