Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 6.5e-120 434.1 224 100.0
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 7.3e-87 324.3 193 89.1
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 8.0e-86 320.9 193 87.0
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.8e-85 319.7 193 87.0
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 5.7e-84 314.7 191 89.0
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 4.6e-81 305.1 192 83.3
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.1e-79 300.4 183 88.5
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 1.2e-65 253.8 192 69.8
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.9e-64 248.8 192 68.8
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 3.9e-64 248.8 192 68.8
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 7.3e-63 244.6 193 66.8
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 3.6e-62 242.3 193 67.4
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 8.1e-62 241.1 193 66.3
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 1.1e-61 240.7 188 67.6
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 2.3e-61 239.6 192 65.6
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 5.2e-61 238.4 192 66.7
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 6.8e-61 238.0 192 64.1
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 1.5e-60 236.9 192 65.6
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 2.0e-60 236.5 194 64.9
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 3.4e-60 235.7 206 63.6
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.3e-59 233.8 192 65.6
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 1.3e-59 233.8 192 66.1
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 2.2e-59 233.0 192 65.6
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 2.2e-59 233.0 191 66.5
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.4e-58 230.3 227 56.4
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 3.2e-58 229.2 192 63.0
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 9.2e-58 227.6 191 64.4
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.2e-57 227.3 190 65.8
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 2.1e-57 226.5 192 62.5
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 3.5e-57 225.7 192 65.6
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 4.6e-57 225.3 189 62.4
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 4.6e-57 225.3 192 63.0
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 1.3e-56 223.8 193 62.2
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 3.0e-56 222.6 192 60.4
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 3.0e-56 222.6 192 61.5
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 3.9e-56 222.2 194 62.4
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 8.6e-56 221.1 192 60.9
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.9e-55 219.9 192 60.9
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.5e-55 219.5 191 60.2
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 2.5e-55 219.5 191 60.2
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 4.3e-55 218.8 191 61.3
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.6e-54 216.9 193 64.2
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 3.6e-54 215.7 197 60.4
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 3.6e-54 215.7 191 60.7
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 1.1e-53 214.2 192 62.5
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.4e-53 213.0 207 56.5
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 6.8e-53 211.5 192 60.4
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 8.9e-53 211.1 184 59.2
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 2.6e-52 209.5 240 52.1
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 3.2e-50 202.6 233 51.1
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 5.4e-50 201.8 187 56.7
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 1.7e-48 196.8 190 54.7
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 6.6e-48 194.9 192 58.3
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 8.7e-48 194.5 188 58.5
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 2.5e-47 193.0 223 53.4
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 2.5e-47 193.0 190 54.2
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 5.6e-47 191.8 198 54.5
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 1.3e-46 190.7 190 57.9
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.1e-46 189.9 221 54.3
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 3.6e-46 189.1 192 55.7
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.8e-45 186.8 167 59.9
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 3.1e-45 186.0 200 55.0
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 2.0e-44 183.3 172 57.0
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 7.6e-44 181.4 156 61.5
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 2.2e-43 179.9 214 52.3
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 1.9e-42 176.8 148 64.2
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 6.0e-41 171.8 148 61.5
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 1.1e-39 167.5 195 46.2
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 4.3e-39 165.6 183 48.1
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.7e-35 153.7 184 42.9
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 1.9e-34 150.2 200 38.0
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 7.9e-33 144.8 212 43.9
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 4.3e-31 139.0 129 60.5
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 9.6e-31 137.9 95 71.6
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.1e-26 124.4 190 42.6
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 2.5e-26 123.2 116 59.5
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 3.5e-25 119.4 108 60.2
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 7.9e-25 118.2 84 65.5
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 8.7e-24 114.8 95 67.4
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 7.6e-20 101.7 95 55.8
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.7e-19 100.5 96 52.1
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 1.1e-18 97.8 93 54.8
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 8.2e-14 81.6 71 57.7
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 1.4e-13 80.9 59 72.9
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 7.7e-12 75.1 190 24.7
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 5.0e-11 72.4 185 25.9
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 8.5e-11 71.6 78 50.0
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 1.5e-07 60.8 71 47.9
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 2.6e-07 60.1 66 53.0
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 8.2e-06 55.1 47 57.4


User provided reference genes

Program Settings