Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 2.4e-59 232.3 143 100.0
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 5.2e-54 214.5 143 83.9
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 9.8e-45 183.7 150 80.7
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 8.3e-44 180.6 150 79.3
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 2.4e-43 179.1 150 78.7
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 2.0e-42 176.0 143 82.5
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 4.2e-40 168.3 148 74.3
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 3.3e-24 115.5 152 62.5
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 8.0e-23 110.9 149 62.4
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 1.8e-22 109.8 150 48.7
CAN.G959.26 Capsicum annuum HOM05D005060 ORTHO05D005975 3.1e-22 109.0 144 59.7
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 5.2e-22 108.2 149 60.4
Nitab4.5_0001270g0130 Nicotiana tabacum HOM05D005060 ORTHO05D005975 5.8e-21 104.8 123 68.3
Sopen10g028770 Solanum pennellii HOM05D005060 ORTHO05D005975 2.9e-20 102.4 147 61.2
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 3.7e-20 102.1 145 60.0
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 4.9e-20 101.7 149 58.4
PGSC0003DMG400007184 Solanum tuberosum HOM05D005060 ORTHO05D005975 4.9e-20 101.7 117 67.5
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 8.3e-20 100.9 148 50.7
Solyc10g077090.2 Solanum lycopersicum HOM05D005060 ORTHO05D005975 9.2e-19 97.4 147 60.5
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 2.7e-18 95.9 145 44.8
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 2.7e-18 95.9 153 53.6
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 7.8e-18 94.4 145 56.6
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 3.9e-17 92.0 133 49.6
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 3.9e-17 92.0 126 45.2
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 5.0e-17 91.7 141 44.0
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 5.0e-17 91.7 153 53.6
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 6.6e-17 91.3 143 54.5
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 1.9e-16 89.7 118 57.6
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 4.3e-16 88.6 147 51.7
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 4.3e-16 88.6 114 51.8
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.1e-15 86.3 132 45.5
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 2.1e-15 86.3 137 51.8
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 2.8e-15 85.9 142 51.4
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 4.7e-15 85.1 147 41.5
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 6.2e-15 84.7 111 47.7
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 1.1e-14 84.0 120 51.7
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 1.4e-14 83.6 145 53.8
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 1.8e-14 83.2 148 43.2
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 5.2e-14 81.6 135 55.6
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 5.2e-14 81.6 135 55.6
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 6.8e-14 81.3 122 57.4
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 1.2e-13 80.5 118 53.4
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 1.5e-13 80.1 147 43.5
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 2.0e-13 79.7 146 52.1
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 2.0e-13 79.7 147 42.9
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 4.4e-13 78.6 154 46.8
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 5.8e-13 78.2 147 50.3
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 7.5e-13 77.8 147 50.3
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 1.3e-12 77.0 143 46.9
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 2.9e-12 75.9 146 43.2
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 6.4e-12 74.7 156 39.1
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 6.4e-12 74.7 117 54.7
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 1.4e-11 73.6 93 66.7
Nitab4.5_0002042g0050 Nicotiana tabacum HOM05D005060 ORTHO05D005975 2.4e-11 72.8 61 63.9
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 4.1e-11 72.0 116 50.0
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 5.4e-11 71.6 111 44.1
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 5.4e-11 71.6 118 44.1
Hund24512 Selenicereus undatus HOM05D005060 ORTHO05D005975 5.4e-11 71.6 146 54.1
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 9.2e-11 70.9 153 50.3
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 1.6e-10 70.1 143 43.4
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 2.1e-10 69.7 144 41.7
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 3.5e-10 68.9 145 40.7
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 4.6e-10 68.6 147 40.8
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 1.3e-09 67.0 147 39.5
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 1.3e-09 67.0 149 40.3
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 1.3e-09 67.0 146 41.8
AT3G56910 Arabidopsis thaliana HOM05D005060 ORTHO05D005975 1.7e-09 66.6 153 40.5
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 3.0e-09 65.9 151 44.4
EL10Ac3g07347 Beta vulgaris HOM05D005060 ORTHO05D005975 3.9e-09 65.5 121 47.1
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 3.9e-09 65.5 149 38.3
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 5.1e-09 65.1 78 73.1
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 8.6e-09 64.3 159 37.1
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 1.1e-08 63.9 130 41.5
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 1.1e-08 63.9 145 38.6
AUR62020993 Chenopodium quinoa HOM05D005060 ORTHO05D005975 1.5e-08 63.5 120 53.3
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 1.5e-08 63.5 148 38.5
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.9e-08 63.2 130 40.8
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 1.9e-08 63.2 147 38.8
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 3.3e-08 62.4 142 49.3
CDE04G0407 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 3.3e-08 62.4 69 79.7
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 3.3e-08 62.4 108 42.6
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 3.3e-08 62.4 151 42.4
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 4.3e-08 62.0 143 38.5
SGA_v2.0_scaffold104G30067 Striga asiatica HOM05D005060 ORTHO05D005975 4.3e-08 62.0 76 46.1
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 5.6e-08 61.6 137 38.7
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 7.3e-08 61.2 92 44.6
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 7.3e-08 61.2 152 47.4
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 7.3e-08 61.2 141 46.1
CANSAT78G0005 Cannabis sativa HOM05D005060 ORTHO05D005975 9.5e-08 60.8 154 46.8
TWI74G0567 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.2e-07 60.5 158 44.3
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 1.6e-07 60.1 150 48.0
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 1.6e-07 60.1 144 38.9
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 1.6e-07 60.1 144 38.9
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.1e-07 59.7 151 43.0
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 3.6e-07 58.9 91 49.5
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 3.6e-07 58.9 91 49.5
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 3.6e-07 58.9 91 49.5
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 3.6e-07 58.9 152 37.5
CARHR167060 Cardamine hirsuta HOM05D005060 ORTHO05D005975 4.7e-07 58.5 152 38.8
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 4.7e-07 58.5 95 55.8
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 6.2e-07 58.2 151 35.1
Duzib093G0151 Durio zibethinus HOM05D005060 ORTHO05D005975 8.1e-07 57.8 144 38.2
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 1.1e-06 57.4 129 48.1
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 1.1e-06 57.4 147 49.0
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 1.8e-06 56.6 146 38.4
QL07p014517 Quercus lobata HOM05D005060 ORTHO05D005975 3.1e-06 55.8 120 35.0
arahy.Tifrunner.gnm1.ann1.U3TF2Z Arachis hypogaea HOM05D005060 ORTHO05D005975 4.0e-06 55.5 62 56.5
A09p49780 Brassica napus HOM05D005060 ORTHO05D005975 8.9e-06 54.3 146 37.0
BraA09t40431Z Brassica rapa HOM05D005060 ORTHO05D005975 8.9e-06 54.3 146 37.0


User provided reference genes

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