Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000060g0070 Nicotiana tabacum HOM05D023962 ORTHO05D000006 4.5e-73 277.7 130 100.0
Nitab4.5_0002317g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000006 4.9e-19 98.2 120 44.2
Nitab4.5_0000098g0170 Nicotiana tabacum HOM05D023962 ORTHO05D000006 2.1e-17 92.8 54 79.6
Nitab4.5_0000344g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.9e-16 88.6 48 83.3
Nitab4.5_0000538g0170 Nicotiana tabacum HOM05D021330 ORTHO05D000006 1.6e-14 83.2 85 45.9
Nitab4.5_0000097g0160 Nicotiana tabacum HOM05D021330 ORTHO05D000006 6.4e-11 71.2 105 38.1
Nitab4.5_0000044g0450 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.4e-11 70.9 114 35.1
Nitab4.5_0005341g0010 Nicotiana tabacum HOM05D023962 ORTHO05D000006 1.1e-10 70.5 83 50.6
Nitab4.5_0000400g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.9e-10 69.7 85 42.4
Nitab4.5_0001175g0190 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.2e-10 68.9 58 53.4
Nitab4.5_0000985g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 4.2e-10 68.6 127 32.3
Sopen09g011430 Solanum pennellii HOM05D000003 ORTHO05D000004 5.4e-10 68.2 82 34.1
Nitab4.5_0004062g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.6e-09 66.6 58 50.0
Nitab4.5_0013534g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.6e-09 66.6 71 43.7
CAN.G276.7 Capsicum annuum HOM05D000024 ORTHO05D000006 7.8e-09 64.3 53 50.9
Nitab4.5_0000064g0120 Nicotiana tabacum HOM05D041081 ORTHO05D000006 1.7e-08 63.2 55 43.6
Nitab4.5_0000992g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.7e-08 63.2 58 50.0
Peaxi162Scf00030g10015 Petunia axillaris HOM05D000040 ORTHO05D000759 1.7e-08 63.2 85 38.8
Sopen00g009000 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-08 63.2 144 23.6
CAN.G135.63 Capsicum annuum HOM05D000003 ORTHO05D000006 2.3e-08 62.8 49 46.9
Nitab4.5_0002008g0080 Nicotiana tabacum HOM05D010714 ORTHO05D000006 3.0e-08 62.4 52 51.9
Sopen00g010970 Solanum pennellii HOM05D000003 ORTHO05D000006 3.0e-08 62.4 119 27.7
Nitab4.5_0000113g0230 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.9e-08 62.0 57 50.9
Psat0s1357g0040 Pisum sativum HOM05D000003 ORTHO05D000006 3.9e-08 62.0 47 48.9
Psat2g089560 Pisum sativum HOM05D000003 ORTHO05D000004 3.9e-08 62.0 47 48.9
Psat2g100080 Pisum sativum HOM05D000003 ORTHO05D000006 3.9e-08 62.0 47 48.9
Psat4g187720 Pisum sativum HOM05D000003 ORTHO05D000006 3.9e-08 62.0 47 48.9
Psat5g282240 Pisum sativum HOM05D000003 ORTHO05D000004 3.9e-08 62.0 47 48.9
Sopen12g011700 Solanum pennellii HOM05D000003 ORTHO05D000004 8.7e-08 60.8 119 28.6
Sopen12g013630 Solanum pennellii HOM05D000003 ORTHO05D000004 8.7e-08 60.8 119 29.4
CAN.G421.3 Capsicum annuum HOM05D000024 ORTHO05D000006 1.1e-07 60.5 111 29.7
Sopen00g004530 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-07 60.1 119 28.6
Nitab4.5_0000268g0110 Nicotiana tabacum HOM05D010714 ORTHO05D000006 1.9e-07 59.7 46 54.3
Sopen00g009450 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-07 59.7 119 27.7
Nitab4.5_0000197g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.3e-07 58.9 70 40.0
Psat0s234g0040 Pisum sativum HOM05D000003 ORTHO05D000006 3.3e-07 58.9 92 32.6
Sopen00g004290 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-07 58.9 89 29.2
EL10Ac1g02039 Beta vulgaris HOM05D000024 ORTHO05D000006 4.3e-07 58.5 74 40.5
Nitab4.5_0000393g0030 Nicotiana tabacum HOM05D021330 ORTHO05D012449 4.3e-07 58.5 119 32.8
Sopen00g008000 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-07 58.5 119 26.9
Sopen00g010500 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-07 58.5 119 26.1
Nitab4.5_0001007g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.6e-07 58.2 74 36.5
Nitab4.5_0001280g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 5.6e-07 58.2 80 35.0
CANSAT80G1651 Cannabis sativa HOM05D000003 ORTHO05D000006 7.3e-07 57.8 105 30.5
Nitab4.5_0000752g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000283 7.3e-07 57.8 120 26.7
Nitab4.5_0001603g0110 Nicotiana tabacum HOM05D000213 ORTHO05D000985 9.6e-07 57.4 69 44.9
Nitab4.5_0001920g0080 Nicotiana tabacum HOM05D010714 ORTHO05D000006 9.6e-07 57.4 55 45.5
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-07 57.4 119 26.1
CAN.G79.73 Capsicum annuum HOM05D000003 ORTHO05D000006 1.3e-06 57.0 46 50.0
MBI11_g29955_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.3e-06 57.0 58 44.8
Peaxi162Scf00169g00172 Petunia axillaris HOM05D000003 ORTHO05D000006 1.3e-06 57.0 84 33.3
Sopen00g004600 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-06 57.0 74 39.2
TPR.G35752 Trifolium pratense HOM05D000003 ORTHO05D010993 1.3e-06 57.0 49 46.9
Aqoxy3G01612 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-06 56.6 50 42.0
Aqoxy3G02413 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-06 56.6 50 42.0
CAN.G321.6 Capsicum annuum HOM05D000003 ORTHO05D000006 1.6e-06 56.6 49 46.9
MBI15_g36476_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.6e-06 56.6 99 29.3
Nitab4.5_0001154g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.6e-06 56.6 63 38.1
Nitab4.5_0004986g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.6e-06 56.6 54 44.4
Sopen00g004670 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-06 56.6 119 26.9
CANSAT80G0617 Cannabis sativa HOM05D000003 ORTHO05D000007 2.1e-06 56.2 96 32.3
Sopen00g004730 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-06 56.2 119 26.9
Sopen00g005560 Solanum pennellii HOM05D000003 ORTHO05D000006 2.1e-06 56.2 47 44.7
TPR.G1529 Trifolium pratense HOM05D000003 ORTHO05D000004 2.1e-06 56.2 49 44.9
CANSAT01G0207 Cannabis sativa HOM05D000003 ORTHO05D000006 2.8e-06 55.8 99 35.4
CANSAT53G0001 Cannabis sativa HOM05D000003 ORTHO05D000006 2.8e-06 55.8 74 35.1
TPR.G13276 Trifolium pratense HOM05D000003 ORTHO05D000004 2.8e-06 55.8 49 42.9
Aqoxy3G01797 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.6e-06 55.5 58 41.4
Nitab4.5_0006483g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.6e-06 55.5 49 40.8
Sopen00g006870 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-06 55.5 74 39.2
Sopen00g007950 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-06 55.5 86 29.1
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-06 55.5 119 28.6
Aqoxy4G01227 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.8e-06 55.1 74 29.7
EL10Ac4g09271 Beta vulgaris HOM05D000003 ORTHO05D000006 4.8e-06 55.1 49 46.9
Nitab4.5_0000175g0270 Nicotiana tabacum HOM05D010714 ORTHO05D000006 4.8e-06 55.1 47 44.7
PSO782G4601 Papaver somniferum HOM05D000003 ORTHO05D000006 4.8e-06 55.1 77 31.2
TPR.G8630 Trifolium pratense HOM05D000003 ORTHO05D000004 4.8e-06 55.1 52 44.2
Aqoxy6G01435 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 6.2e-06 54.7 48 45.8
CANSAT54G1864 Cannabis sativa HOM05D000003 ORTHO05D000004 6.2e-06 54.7 61 39.3
Sopen00g009820 Solanum pennellii HOM05D000003 ORTHO05D000004 6.2e-06 54.7 72 34.7
Sopen05g013420 Solanum pennellii HOM05D000003 ORTHO05D000004 6.2e-06 54.7 59 35.6
TPR.G31613 Trifolium pratense HOM05D000003 ORTHO05D000007 6.2e-06 54.7 49 46.9
CANSAT56G0142 Cannabis sativa HOM05D000003 ORTHO05D000007 8.1e-06 54.3 61 37.7
CANSAT80G2328 Cannabis sativa HOM05D000003 ORTHO05D000004 8.1e-06 54.3 49 40.8
MBI07_g33314_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 8.1e-06 54.3 70 38.6
Sopen00g007130 Solanum pennellii HOM05D000003 ORTHO05D000004 8.1e-06 54.3 61 36.1
Sopen00g011710 Solanum pennellii HOM05D000003 ORTHO05D000007 8.1e-06 54.3 60 35.0
Sopen12g026830 Solanum pennellii HOM05D000003 ORTHO05D000007 8.1e-06 54.3 74 29.7


User provided reference genes

Program Settings