Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 3.0e-120 435.3 232 100.0
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 5.2e-112 407.9 232 94.8
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 1.0e-83 313.9 234 76.5
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.9e-82 309.7 236 75.8
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 2.2e-78 296.2 236 73.7
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 4.9e-78 295.0 236 74.2
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 8.3e-78 294.3 236 74.6
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.1e-72 277.3 247 68.8
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 2.9e-70 269.2 237 69.6
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 1.4e-61 240.4 231 64.5
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.2e-60 237.3 236 61.0
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 3.3e-58 229.2 222 59.9
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 8.1e-57 224.6 243 56.4
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 2.9e-54 216.1 214 63.1
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 2.4e-53 213.0 243 55.6
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 2.7e-52 209.5 234 54.3
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 3.5e-52 209.1 281 51.2
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 2.8e-49 199.5 231 53.7
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 2.4e-48 196.4 235 53.2
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 2.0e-47 193.4 233 53.6
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 5.8e-47 191.8 231 54.5
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 7.6e-47 191.4 248 52.0
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.2e-46 189.9 236 52.1
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 2.9e-46 189.5 241 50.6
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 5.4e-45 185.3 224 53.1
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 5.4e-45 185.3 224 51.8
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 7.1e-45 184.9 224 52.7
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 7.1e-45 184.9 231 53.7
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 2.7e-44 183.0 213 54.5
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 3.9e-43 179.1 236 50.8
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 5.1e-43 178.7 228 52.6
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 3.3e-42 176.0 228 50.0
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 4.3e-42 175.6 226 49.1
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 2.8e-41 172.9 229 50.7
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 4.8e-41 172.2 215 52.1
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 1.1e-40 171.0 248 46.4
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 4.0e-40 169.1 213 50.2
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.2e-39 167.5 231 49.4
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.3e-38 164.1 280 42.9
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.7e-38 163.7 232 47.0
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 8.4e-38 161.4 189 52.9
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 8.4e-38 161.4 233 48.5
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.1e-37 161.0 241 45.6
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 5.5e-37 158.7 235 45.5
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 7.1e-37 158.3 221 46.6
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.2e-36 157.5 228 47.4
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 3.5e-36 156.0 242 43.0
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 6.0e-36 155.2 233 49.8
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 6.0e-36 155.2 232 49.6
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 7.9e-36 154.8 231 46.8
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 1.3e-35 154.1 233 47.2
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.3e-35 154.1 196 49.5
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 6.7e-35 151.8 229 45.9
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.5e-34 149.8 233 48.1
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.5e-34 149.8 223 45.3
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 3.3e-34 149.4 228 43.9
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.3e-34 149.4 228 43.9
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 4.3e-34 149.1 160 62.5
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 4.3e-34 149.1 242 42.6
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 7.4e-34 148.3 223 45.7
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 1.3e-33 147.5 201 50.2
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.6e-33 147.1 223 44.4
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 1.6e-33 147.1 201 50.2
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 6.2e-33 145.2 222 45.5
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.1e-32 144.4 164 50.6
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.4e-32 144.1 239 47.7
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 3.1e-32 142.9 223 43.5
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 6.9e-32 141.7 227 44.1
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.5e-31 140.6 242 42.6
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.0e-31 140.2 209 46.9
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 4.5e-31 139.0 236 41.1
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.3e-30 137.5 208 46.2
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.7e-30 137.1 221 44.3
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.2e-28 131.0 232 41.8
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.6e-28 130.6 231 42.9
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 6.0e-28 128.6 229 40.6
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.0e-27 127.9 180 48.3
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 2.3e-27 126.7 222 39.6
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 3.9e-27 125.9 226 41.6
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 5.1e-27 125.6 202 43.1
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.5e-26 123.2 222 41.4
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 9.7e-26 121.3 223 41.3
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 3.7e-25 119.4 234 40.2
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 8.2e-25 118.2 229 38.9
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 2.4e-24 116.7 227 38.8
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 3.1e-24 116.3 220 38.2
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 5.3e-24 115.5 229 38.0
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 5.3e-24 115.5 220 38.6
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.2e-23 114.4 220 39.5
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 1.2e-23 114.4 220 39.5
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 3.4e-23 112.8 220 39.1
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 1.3e-22 110.9 226 37.2
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 3.8e-22 109.4 217 39.2
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 8.5e-22 108.2 150 42.7
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 1.1e-21 107.8 221 37.1
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 1.1e-21 107.8 150 42.7
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 1.4e-21 107.5 86 62.8
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 1.4e-21 107.5 251 35.5
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 1.4e-21 107.5 222 41.9
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 3.2e-21 106.3 188 43.1
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 2.7e-20 103.2 164 39.0
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 4.6e-20 102.4 222 41.4
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 1.0e-19 101.3 224 35.3
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 1.4e-19 100.9 231 38.5
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 1.8e-19 100.5 164 39.6
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.8e-19 100.5 226 37.6
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.3e-19 100.1 218 39.0
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 4.3e-18 95.9 223 39.9
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 7.4e-18 95.1 224 37.9
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 7.4e-18 95.1 223 34.1
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 4.8e-17 92.4 94 51.1
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 1.1e-16 91.3 222 39.6
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 4.1e-16 89.4 220 33.6
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 4.1e-16 89.4 222 38.3
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.3e-14 84.3 201 36.8
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 5.0e-14 82.4 185 34.6
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 9.4e-13 78.2 189 34.4
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 2.1e-12 77.0 243 32.9
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 6.1e-12 75.5 61 55.7
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 5.7e-10 68.9 159 36.5
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 7.4e-10 68.6 159 36.5
Sopen01g004270 Solanum pennellii HOM05D005900 ORTHO05D007306 7.4e-10 68.6 107 55.1
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.6e-07 60.1 146 36.3
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 7.7e-07 58.5 43 60.5
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 2.2e-06 57.0 239 31.4
Haze_23070 Corylus avellana HOM05D005900 ORTHO05D007306 6.5e-06 55.5 181 36.5


User provided reference genes

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