Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 9.6e-124 446.8 221 100.0
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 5.6e-116 421.0 223 94.6
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 2.1e-115 419.1 223 94.2
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 3.6e-115 418.3 223 93.7
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 6.2e-115 417.5 223 94.2
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 7.6e-113 410.6 222 93.2
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.3e-107 393.3 221 91.0
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 4.9e-104 381.3 223 84.3
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 1.0e-101 373.6 223 82.1
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 1.8e-101 372.9 221 81.0
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 6.2e-99 364.4 214 83.6
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 1.4e-98 363.2 222 80.2
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 2.4e-98 362.5 224 79.0
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 4.0e-98 361.7 225 80.0
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 6.9e-98 360.9 217 80.6
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 1.5e-97 359.8 214 80.4
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 3.4e-97 358.6 216 81.5
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 4.5e-97 358.2 224 77.2
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 1.0e-96 357.1 216 81.0
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.7e-96 356.3 216 82.4
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 2.9e-96 355.5 215 80.9
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 6.5e-96 354.4 216 81.5
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 1.1e-95 353.6 216 79.2
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 1.9e-95 352.8 230 77.0
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 2.5e-95 352.4 213 82.2
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 3.2e-95 352.1 215 78.6
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 7.1e-95 350.9 226 77.0
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 9.3e-95 350.5 216 78.7
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 1.2e-94 350.1 223 74.9
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 1.6e-94 349.7 216 80.1
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 2.1e-94 349.4 216 80.1
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 2.1e-94 349.4 216 78.2
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 2.7e-94 349.0 228 77.2
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 2.7e-94 349.0 228 77.2
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 3.5e-94 348.6 220 76.4
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 3.5e-94 348.6 215 79.5
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 6.0e-94 347.8 217 80.2
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 7.9e-94 347.4 223 74.4
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.0e-93 347.1 216 79.6
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.0e-93 347.1 216 78.7
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 1.0e-93 347.1 216 79.2
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 1.0e-93 347.1 216 77.3
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.3e-93 345.9 217 77.4
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 2.3e-93 345.9 215 77.2
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 5.1e-93 344.7 216 79.6
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 5.1e-93 344.7 215 80.0
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 5.1e-93 344.7 216 78.7
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 8.7e-93 344.0 216 77.8
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 1.1e-92 343.6 216 77.3
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.9e-92 342.8 216 77.3
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.5e-92 342.4 211 78.2
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.5e-92 342.4 220 76.4
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 3.3e-92 342.0 216 78.2
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 3.3e-92 342.0 228 75.0
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 9.6e-92 340.5 218 76.6
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 1.3e-91 340.1 218 75.2
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 1.3e-91 340.1 218 75.7
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 4.8e-91 338.2 220 74.5
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 1.1e-90 337.0 216 77.8
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 3.1e-90 335.5 216 76.4
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 5.3e-90 334.7 223 72.6
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 9.0e-90 334.0 220 73.2
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 9.0e-90 334.0 203 81.8
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.2e-89 333.6 218 73.9
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 1.5e-89 333.2 216 76.9
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 2.0e-89 332.8 216 77.3
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 3.4e-89 332.0 212 75.5
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 3.4e-89 332.0 218 77.5
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 3.4e-89 332.0 214 77.6
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 5.9e-89 331.3 217 76.0
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 5.9e-89 331.3 215 75.8
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.0e-88 330.5 214 75.7
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.0e-88 330.5 214 77.1
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.7e-88 329.7 215 74.9
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 2.2e-88 329.3 215 75.8
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 6.5e-88 327.8 216 75.0
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 8.4e-88 327.4 214 75.2
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 8.4e-88 327.4 214 75.2
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 1.1e-87 327.0 214 74.3
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 1.4e-87 326.6 214 74.8
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.4e-87 326.6 215 77.7
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.9e-87 326.2 216 75.9
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 2.5e-87 325.9 216 75.5
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 3.2e-87 325.5 214 74.8
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 3.2e-87 325.5 214 74.8
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 3.0e-85 318.9 217 72.8
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 6.7e-85 317.8 221 69.7
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 2.2e-83 312.8 202 77.7
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.2e-81 307.0 199 74.9
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 7.7e-81 304.3 219 68.0
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 1.6e-78 296.6 218 71.1
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 6.1e-78 294.7 218 68.3
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 6.1e-78 294.7 205 68.3
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 5.7e-76 288.1 219 65.3
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 5.7e-76 288.1 213 67.1
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 9.7e-76 287.3 218 67.4
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 1.2e-73 280.4 194 73.2
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 4.5e-73 278.5 211 67.8
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 1.7e-72 276.6 185 70.3
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 3.2e-71 272.3 224 60.3
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 4.7e-70 268.5 189 72.5
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 8.8e-69 264.2 193 68.9
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 5.7e-68 261.5 193 66.3
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 4.5e-65 251.9 147 81.6
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 2.9e-64 249.2 151 77.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 1.9e-63 246.5 151 80.1
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.5e-63 246.1 262 53.1
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.6e-62 243.4 149 79.2
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 1.0e-56 224.2 148 73.6
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 4.4e-52 208.8 178 56.2
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 1.6e-46 190.3 190 48.9
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.8e-45 186.8 102 86.3
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 1.0e-37 161.0 213 46.5
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 5.4e-26 122.1 94 61.7
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 2.0e-25 120.2 66 84.8
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 7.8e-25 118.2 86 66.3
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 3.9e-24 115.9 88 64.8
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 3.3e-23 112.8 84 61.9
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 8.1e-22 108.2 67 71.6
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 2.3e-16 90.1 147 40.8
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 1.4e-13 80.9 66 57.6
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 5.6e-07 58.9 41 58.5
MELO3C013239.2 Cucumis melo HOM05D000031 ORTHO05D000030 4.7e-06 55.8 32 71.9


User provided reference genes

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