Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000059g0150 Nicotiana tabacum HOM05D000995 ORTHO05D000638 7.9e-91 337.0 164 100.0
Nitab4.5_0000003g0300 Nicotiana tabacum HOM05D000995 ORTHO05D000638 5.4e-31 138.3 168 53.0
Nitab4.5_0000639g0150 Nicotiana tabacum HOM05D000995 ORTHO05D000638 6.6e-21 104.8 96 62.5
CAN.G624.18 Capsicum annuum HOM05D000995 ORTHO05D000638 7.3e-20 101.3 173 39.3
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-19 99.0 176 38.6
Nitab4.5_0000199g0110 Nicotiana tabacum HOM05D000995 ORTHO05D010997 4.7e-19 98.6 176 40.3
PGSC0003DMG400001285 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.1e-18 97.4 187 35.8
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.8e-18 96.7 186 37.1
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.5e-17 93.6 187 35.8
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 1.7e-16 90.1 173 33.5
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.7e-16 90.1 187 34.2
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.2e-16 89.7 185 34.6
Nitab4.5_0000621g0100 Nicotiana tabacum HOM05D003574 ORTHO05D010997 6.4e-16 88.2 163 38.7
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 1.1e-15 87.4 163 38.7
CAN.G322.132 Capsicum annuum HOM05D000995 ORTHO05D000638 1.4e-15 87.0 164 35.4
MSTRG.26045 Avicennia marina HOM05D000995 ORTHO05D000638 3.2e-15 85.9 182 37.4
Nitab4.5_0000032g0300 Nicotiana tabacum HOM05D000995 ORTHO05D010997 5.4e-15 85.1 186 36.0
Nitab4.5_0000378g0120 Nicotiana tabacum HOM05D000995 ORTHO05D010997 1.6e-14 83.6 163 35.6
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 6.0e-14 81.6 59 66.1
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.0e-14 81.6 93 46.2
QL07p006782 Quercus lobata HOM05D000995 ORTHO05D002620 6.6e-13 78.2 175 29.7
Nitab4.5_0010291g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 2.5e-12 76.3 58 60.3
QL02p003670 Quercus lobata HOM05D000995 ORTHO05D001773 3.3e-12 75.9 174 29.3
QL07p017318 Quercus lobata HOM05D000995 ORTHO05D001773 3.3e-12 75.9 174 29.3
QL02p080036 Quercus lobata HOM05D000995 ORTHO05D001773 7.3e-12 74.7 175 29.1
QL05p048948 Quercus lobata HOM05D000995 ORTHO05D001773 7.3e-12 74.7 175 29.1
QL06p019608 Quercus lobata HOM05D000995 ORTHO05D001773 7.3e-12 74.7 175 29.1
QL08p038287 Quercus lobata HOM05D000995 ORTHO05D001773 7.3e-12 74.7 175 29.1
QL93p0181_0012 Quercus lobata HOM05D000995 ORTHO05D001773 7.3e-12 74.7 175 29.1
QL93p0209_0006 Quercus lobata HOM05D000995 ORTHO05D001773 7.3e-12 74.7 175 29.1
Nitab4.5_0000022g0410 Nicotiana tabacum HOM05D000995 ORTHO05D001773 9.6e-12 74.3 58 60.3
Nitab4.5_0010513g0020 Nicotiana tabacum HOM05D000995 ORTHO05D001773 9.6e-12 74.3 53 67.9
PGSC0003DMG400030152 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.6e-11 73.6 60 60.0
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 3.6e-11 72.4 174 32.2
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 3.6e-11 72.4 161 33.5
Nitab4.5_0002941g0050 Nicotiana tabacum HOM05D000995 ORTHO05D000638 8.1e-11 71.2 58 56.9
QL08p015694 Quercus lobata HOM05D000995 ORTHO05D001773 1.1e-10 70.9 175 29.7
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.8e-10 70.1 59 52.5
AUR62035177 Chenopodium quinoa HOM05D004781 ORTHO05D001773 3.1e-10 69.3 111 39.6
Hma1.2p1_0120F.1_g057263 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 6.9e-10 68.2 58 55.2
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 6.9e-10 68.2 58 55.2
Hma1.2p1_0663F.1_g198890 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 6.9e-10 68.2 58 55.2
Hma1.2p1_1193F.1_g265550 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 6.9e-10 68.2 58 55.2
AUR62042503 Chenopodium quinoa HOM05D000995 ORTHO05D001773 1.2e-09 67.4 111 37.8
Hma1.2p1_2783F.1_g328410 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 2.0e-09 66.6 191 33.5
PGSC0003DMG400038482 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.0e-09 66.6 48 60.4
Rhsim05G0112600 Rhododendron simsii HOM05D000995 ORTHO05D001773 4.4e-09 65.5 89 37.1
RhsimUnG0218100 Rhododendron simsii HOM05D000995 ORTHO05D001773 4.4e-09 65.5 58 53.4
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.4e-09 65.5 59 47.5
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 5.8e-09 65.1 46 69.6
Rhsim01G0078000 Rhododendron simsii HOM05D000995 ORTHO05D001773 5.8e-09 65.1 59 54.2
Rhsim01G0099100 Rhododendron simsii HOM05D000995 ORTHO05D001773 5.8e-09 65.1 64 51.6
Rhsim01G0104900 Rhododendron simsii HOM05D000995 ORTHO05D001773 5.8e-09 65.1 64 51.6
Rhsim02G0098200 Rhododendron simsii HOM05D000995 ORTHO05D002620 5.8e-09 65.1 64 51.6
Rhsim05G0140400 Rhododendron simsii HOM05D000995 ORTHO05D001773 5.8e-09 65.1 89 37.1
Rhsim08G0106900 Rhododendron simsii HOM05D000995 ORTHO05D002620 5.8e-09 65.1 64 51.6
Rhsim13G0131600 Rhododendron simsii HOM05D000995 ORTHO05D002620 5.8e-09 65.1 64 51.6
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 5.8e-09 65.1 59 47.5
Hma1.2p1_0446F.1_g154720 Hydrangea macrophylla HOM05D000995 ORTHO05D000638 7.6e-09 64.7 57 52.6
AUR62034805 Chenopodium quinoa HOM05D000995 ORTHO05D001773 1.3e-08 63.9 60 48.3
EL10Ac2g03094 Beta vulgaris HOM05D000995 ORTHO05D000638 1.7e-08 63.5 58 46.6
AUR62026535 Chenopodium quinoa HOM05D000995 ORTHO05D000638 1.7e-08 63.5 111 36.9
AUR62027594 Chenopodium quinoa HOM05D000995 ORTHO05D001773 1.7e-08 63.5 58 51.7
AUR62036388 Chenopodium quinoa HOM05D000995 ORTHO05D000638 1.7e-08 63.5 58 51.7
EL10Ac1g00951 Beta vulgaris HOM05D000995 ORTHO05D001773 2.2e-08 63.2 59 49.2
EL10Ac3g06382 Beta vulgaris HOM05D004781 ORTHO05D001773 2.2e-08 63.2 59 49.2
EL10Ac6g13855 Beta vulgaris HOM05D004781 ORTHO05D001773 2.2e-08 63.2 59 49.2
EL10Ac9g22875 Beta vulgaris HOM05D004781 ORTHO05D001773 2.2e-08 63.2 59 49.2
FAN26G0298 Fragaria x ananassa HOM05D000995 ORTHO05D000638 2.2e-08 63.2 58 48.3
Nitab4.5_0007010g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 2.2e-08 63.2 150 32.0
Nitab4.5_0000378g0130 Nicotiana tabacum HOM05D000995 ORTHO05D010997 2.9e-08 62.8 48 58.3
EL10Ac6g14812 Beta vulgaris HOM05D004781 ORTHO05D001773 3.8e-08 62.4 59 49.2
COL.COLO4_17167 Corchorus olitorius HOM05D016252 ORTHO05D000638 3.8e-08 62.4 70 41.4
MELO3C000447.2 Cucumis melo HOM05D000995 ORTHO05D000638 3.8e-08 62.4 58 48.3
QL05p018402 Quercus lobata HOM05D000995 ORTHO05D001773 3.8e-08 62.4 58 51.7
QL11p006726 Quercus lobata HOM05D000995 ORTHO05D001773 3.8e-08 62.4 55 49.1
Hund29557 Selenicereus undatus HOM05D008217 ORTHO05D010406 3.8e-08 62.4 175 31.4
COL.COLO4_28174 Corchorus olitorius HOM05D016252 ORTHO05D000638 4.9e-08 62.0 70 42.9
PGSC0003DMG400035791 Solanum tuberosum HOM05D000995 ORTHO05D000638 4.9e-08 62.0 59 47.5
ClCG01G016350 Citrullus lanatus HOM05D000995 ORTHO05D001773 6.4e-08 61.6 179 30.2
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 6.4e-08 61.6 56 48.2
Nitab4.5_0021362g0010 Nicotiana tabacum HOM05D003911 ORTHO05D001773 6.4e-08 61.6 47 57.4
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 6.4e-08 61.6 59 45.8
Rhsim05G0147000 Rhododendron simsii HOM05D000995 ORTHO05D001773 8.4e-08 61.2 58 50.0
AUR62015264 Chenopodium quinoa HOM05D000995 ORTHO05D000638 1.1e-07 60.8 58 50.0
Hund21297 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.1e-07 60.8 179 29.6
Hund03430 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.4e-07 60.5 58 48.3
Hund22959 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.4e-07 60.5 58 48.3
Hund24738 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.4e-07 60.5 58 46.6
Hund29701 Selenicereus undatus HOM05D008217 ORTHO05D010406 1.4e-07 60.5 58 48.3
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.4e-07 60.5 59 45.8
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.9e-07 60.1 58 44.8
ClCG02G008620 Citrullus lanatus HOM05D000995 ORTHO05D001773 3.2e-07 59.3 179 29.1
FAN22G1478 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.2e-07 59.3 58 46.6
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 3.2e-07 59.3 59 49.2
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.2e-07 59.3 45 51.1
ClCG01G008830 Citrullus lanatus HOM05D000995 ORTHO05D000638 4.2e-07 58.9 179 30.2
ClCG09G009920 Citrullus lanatus HOM05D000995 ORTHO05D001773 4.2e-07 58.9 179 29.6
MELO3C019586.2 Cucumis melo HOM05D000995 ORTHO05D000638 4.2e-07 58.9 58 46.6
FAN03G0592 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.2e-07 58.9 58 46.6
Nitab4.5_0022154g0010 Nicotiana tabacum HOM05D000995 ORTHO05D000638 4.2e-07 58.9 58 44.8
Hund01653 Selenicereus undatus HOM05D008217 ORTHO05D010406 4.2e-07 58.9 58 46.6
ClCG04G001610 Citrullus lanatus HOM05D000995 ORTHO05D000638 5.4e-07 58.5 58 44.8
ClCG08G000680 Citrullus lanatus HOM05D000995 ORTHO05D001773 5.4e-07 58.5 176 29.0
FAN03G2265 Fragaria x ananassa HOM05D000995 ORTHO05D002620 5.4e-07 58.5 58 46.6
Rhsim09G0065400 Rhododendron simsii HOM05D000995 ORTHO05D000638 5.4e-07 58.5 89 34.8
EL10Ac1g01776 Beta vulgaris HOM05D000995 ORTHO05D001773 7.1e-07 58.2 58 43.1
MELO3C000457.2 Cucumis melo HOM05D000995 ORTHO05D000638 7.1e-07 58.2 176 29.0
MELO3C029552.2 Cucumis melo HOM05D000995 ORTHO05D000638 7.1e-07 58.2 188 29.8
FAN17G0461 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.1e-07 58.2 58 46.6
MELO3C000787.2 Cucumis melo HOM05D000995 ORTHO05D001773 9.3e-07 57.8 186 28.5
MELO3C026674.2 Cucumis melo HOM05D000995 ORTHO05D001773 9.3e-07 57.8 175 29.7
MELO3C033121.2 Cucumis melo HOM05D000995 ORTHO05D000638 9.3e-07 57.8 58 46.6
FAN21G0715 Fragaria x ananassa HOM05D000995 ORTHO05D002620 9.3e-07 57.8 58 46.6
FAN21G3797 Fragaria x ananassa HOM05D000995 ORTHO05D002620 9.3e-07 57.8 58 46.6
FAN25G0906 Fragaria x ananassa HOM05D000995 ORTHO05D002620 9.3e-07 57.8 73 38.4
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 9.3e-07 57.8 59 47.5
ClCG02G008670 Citrullus lanatus HOM05D000995 ORTHO05D001773 1.2e-06 57.4 59 42.4
FvH4_3g22800 Fragaria vesca HOM05D000995 ORTHO05D002620 1.2e-06 57.4 58 46.6
FvH4_4g22273 Fragaria vesca HOM05D000995 ORTHO05D002620 1.2e-06 57.4 58 46.6
FAN21G1141 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.2e-06 57.4 58 46.6
FAN25G0179 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.2e-06 57.4 58 46.6
FAN25G1897 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.2e-06 57.4 58 46.6
FAN28G2204 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.2e-06 57.4 58 46.6
FAN02G1939 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.6e-06 57.0 58 46.6
FAN02G2455 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.6e-06 57.0 58 46.6
FAN03G3450 Fragaria x ananassa HOM05D000995 ORTHO05D002620 1.6e-06 57.0 58 46.6
QL03p037625 Quercus lobata HOM05D000995 ORTHO05D001773 1.6e-06 57.0 53 52.8
Sed0026097 Sechium edule HOM05D000995 ORTHO05D000638 1.6e-06 57.0 58 44.8
PGSC0003DMG400036228 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.6e-06 57.0 56 50.0
ClCG08G001070 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.1e-06 56.6 179 29.1
MELO3C027383.2 Cucumis melo HOM05D000995 ORTHO05D001773 2.1e-06 56.6 58 46.6
FAN07G1874 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.1e-06 56.6 58 41.4
FAN07G2626 Fragaria x ananassa HOM05D000995 ORTHO05D000638 2.1e-06 56.6 58 44.8
FAN22G0912 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.1e-06 56.6 58 46.6
MELO3C014207.2 Cucumis melo HOM05D000995 ORTHO05D000638 2.7e-06 56.2 58 44.8
MELO3C027512.2 Cucumis melo HOM05D000995 ORTHO05D000638 2.7e-06 56.2 58 46.6
FvH4_4g15164 Fragaria vesca HOM05D000995 ORTHO05D002620 2.7e-06 56.2 58 44.8
FAN04G0230 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.7e-06 56.2 58 44.8
FAN16G1582 Fragaria x ananassa HOM05D000995 ORTHO05D002620 2.7e-06 56.2 58 46.6
FAN16G1736 Fragaria x ananassa HOM05D000995 ORTHO05D000638 2.7e-06 56.2 58 44.8
PGSC0003DMG400018021 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.7e-06 56.2 56 48.2
EL10Ac4g08443 Beta vulgaris HOM05D000995 ORTHO05D001773 3.5e-06 55.8 58 39.7
ClCG10G005780 Citrullus lanatus HOM05D000995 ORTHO05D001773 3.5e-06 55.8 58 44.8
MELO3C027458.2 Cucumis melo HOM05D000995 ORTHO05D000638 3.5e-06 55.8 58 46.6
FAN15G3269 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.5e-06 55.8 58 44.8
FAN20G1567 Fragaria x ananassa HOM05D000995 ORTHO05D002620 3.5e-06 55.8 58 44.8
Hund24690 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.5e-06 55.8 58 39.7
Hund26451 Selenicereus undatus HOM05D004781 ORTHO05D001773 3.5e-06 55.8 58 41.4
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 3.5e-06 55.8 57 42.1
CAN.G1525.6 Capsicum annuum HOM05D000995 ORTHO05D007165 4.6e-06 55.5 53 49.1
ClCG01G009740 Citrullus lanatus HOM05D000995 ORTHO05D000638 4.6e-06 55.5 175 29.7
ClCG07G007890 Citrullus lanatus HOM05D000995 ORTHO05D001773 4.6e-06 55.5 58 44.8
ClCG08G006380 Citrullus lanatus HOM05D000995 ORTHO05D001773 4.6e-06 55.5 176 27.3
FvH4_2g15190 Fragaria vesca HOM05D000995 ORTHO05D002620 4.6e-06 55.5 58 44.8
FAN03G1525 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.6e-06 55.5 58 44.8
FAN16G3591 Fragaria x ananassa HOM05D000995 ORTHO05D002620 4.6e-06 55.5 58 43.1
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 4.6e-06 55.5 58 48.3
MELO3C000149.2 Cucumis melo HOM05D000995 ORTHO05D000638 6.0e-06 55.1 175 29.1
FAN13G1226 Fragaria x ananassa HOM05D000995 ORTHO05D002620 6.0e-06 55.1 58 44.8
Hund01802 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund08788 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund10681 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund16293 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund17483 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund23722 Selenicereus undatus HOM05D000995 ORTHO05D000638 6.0e-06 55.1 58 39.7
Hund23885 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund26237 Selenicereus undatus HOM05D007953 ORTHO05D009936 6.0e-06 55.1 58 43.1
Hund29171 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund29540 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund29568 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund29616 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund29617 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund29800 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund29812 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
Hund30412 Selenicereus undatus HOM05D004781 ORTHO05D001773 6.0e-06 55.1 58 39.7
EL10Ac5g11925 Beta vulgaris HOM05D000995 ORTHO05D001773 7.8e-06 54.7 58 39.7
FAN02G2053 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.8e-06 54.7 58 44.8
FAN28G1060 Fragaria x ananassa HOM05D000995 ORTHO05D002620 7.8e-06 54.7 58 44.8
Hund02727 Selenicereus undatus HOM05D007953 ORTHO05D009936 7.8e-06 54.7 58 43.1
Hund03527 Selenicereus undatus HOM05D007953 ORTHO05D009936 7.8e-06 54.7 58 43.1
Hund04316 Selenicereus undatus HOM05D004781 ORTHO05D001773 7.8e-06 54.7 58 39.7
Hund29669 Selenicereus undatus HOM05D007953 ORTHO05D009936 7.8e-06 54.7 58 43.1


User provided reference genes

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