Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 5.3e-91 337.8 186 100.0
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.3e-84 316.6 186 93.0
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 3.2e-72 275.4 187 77.5
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 5.1e-70 268.1 190 83.7
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 3.6e-55 218.8 190 72.1
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 2.4e-51 206.1 187 63.6
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 2.0e-50 203.0 187 62.6
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 1.9e-48 196.4 190 58.9
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 2.1e-47 193.0 190 57.9
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 2.7e-47 192.6 184 59.8
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 2.3e-46 189.5 191 59.2
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 7.4e-45 184.5 190 55.3
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 2.2e-44 183.0 190 54.7
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 1.1e-43 180.6 200 55.5
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 1.2e-42 177.2 188 54.3
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 1.0e-41 174.1 192 54.2
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 5.0e-41 171.8 195 53.3
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 1.5e-40 170.2 192 51.0
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.5e-40 170.2 190 52.6
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.9e-40 169.9 186 53.8
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 1.9e-40 169.9 194 53.1
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 3.2e-40 169.1 186 57.0
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 7.2e-40 167.9 194 49.5
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 1.2e-39 167.2 189 56.6
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 3.6e-39 165.6 181 49.7
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 6.1e-39 164.9 189 50.8
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 1.0e-38 164.1 184 54.3
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 5.2e-38 161.8 186 53.2
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 8.8e-38 161.0 186 58.1
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 1.2e-37 160.6 190 54.7
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 1.5e-37 160.2 166 56.0
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 5.7e-37 158.3 188 48.9
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 7.5e-37 157.9 192 55.7
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.3e-36 157.1 187 54.0
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 4.8e-36 155.2 120 66.7
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 4.8e-36 155.2 187 53.5
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 1.4e-35 153.7 187 54.5
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.8e-35 153.3 186 53.2
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 3.1e-35 152.5 190 56.8
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 4.1e-35 152.1 189 54.5
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 9.1e-35 151.0 185 53.0
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.6e-34 150.2 190 52.1
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 3.5e-34 149.1 189 54.0
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 7.7e-34 147.9 190 55.3
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 1.3e-33 147.1 184 51.1
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 3.8e-33 145.6 139 56.8
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 8.5e-33 144.4 199 44.2
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 1.1e-32 144.1 194 49.0
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.5e-32 143.7 126 60.3
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 4.2e-32 142.1 191 48.7
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 4.2e-32 142.1 192 52.6
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 9.4e-32 141.0 123 63.4
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.2e-31 140.6 181 51.9
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 6.1e-31 138.3 186 49.5
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 1.8e-30 136.7 184 52.2
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 3.0e-30 136.0 191 55.0
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 5.2e-30 135.2 150 52.7
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 5.2e-30 135.2 150 52.7
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 5.2e-30 135.2 190 47.9
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 6.8e-30 134.8 184 51.6
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 6.8e-30 134.8 164 54.3
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 1.2e-29 134.0 164 56.1
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 2.0e-29 133.3 189 42.3
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 2.0e-29 133.3 191 50.3
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 4.4e-29 132.1 164 55.5
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 2.2e-28 129.8 166 54.2
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 8.3e-28 127.9 192 51.0
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 1.4e-27 127.1 133 59.4
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 1.4e-27 127.1 186 48.9
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 5.4e-27 125.2 191 46.1
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 5.4e-27 125.2 172 48.8
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 1.2e-26 124.0 189 49.7
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 1.6e-26 123.6 138 58.7
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 1.6e-26 123.6 189 50.3
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 2.0e-26 123.2 195 49.7
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 5.9e-26 121.7 192 51.0
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 7.7e-26 121.3 188 51.1
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 1.0e-25 120.9 148 58.1
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 1.3e-25 120.6 179 48.6
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 1.7e-25 120.2 196 48.5
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 2.3e-25 119.8 194 50.0
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 5.0e-25 118.6 151 51.7
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 6.6e-25 118.2 183 49.2
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 1.5e-24 117.1 190 45.8
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 1.9e-24 116.7 184 47.8
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 3.3e-24 115.9 170 48.8
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 7.2e-24 114.8 196 47.4
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 1.2e-23 114.0 190 44.2
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 1.2e-23 114.0 186 47.3
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 1.6e-23 113.6 123 53.7
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 2.8e-23 112.8 126 51.6
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 4.7e-23 112.1 171 50.3
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 6.1e-23 111.7 137 57.7
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 8.0e-23 111.3 177 43.5
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 1.4e-22 110.5 128 50.8
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 1.5e-21 107.1 131 56.5
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 5.7e-21 105.1 186 46.2
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 2.2e-20 103.2 138 52.9
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 5.4e-19 98.6 118 55.1
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 7.0e-19 98.2 158 47.5
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 3.3e-16 89.4 102 56.9
BraA10t43560Z Brassica rapa HOM05D007139 ORTHO05D009171 1.1e-11 74.3 51 74.5
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.0e-09 67.8 100 43.0
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 2.1e-07 60.1 196 34.7
CBR_g22376 Chara braunii HOM05D007139 ORTHO05D009171 3.1e-06 56.2 127 40.9
AagrBONN_evm.TU.Sc2ySwM_344.2913 Anthoceros agrestis HOM05D007139 ORTHO05D009171 4.0e-06 55.8 102 44.1
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 8.9e-06 54.7 77 54.5


User provided reference genes

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