Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.4e-171 604.4 333 100.0
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-88 328.9 282 67.4
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-87 327.0 282 66.0
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.3e-87 324.7 282 70.9
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-82 310.5 284 68.7
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-67 260.4 239 64.4
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.8e-64 248.8 236 61.0
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.4e-63 245.4 237 61.6
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-62 244.6 252 60.7
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.0e-62 241.9 173 76.3
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.0e-61 238.8 228 61.0
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.3e-59 231.9 244 63.9
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.5e-59 231.5 227 59.0
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.4e-55 218.8 214 69.6
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-54 217.6 339 44.2
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-53 214.2 279 52.3
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.6e-53 212.6 226 57.1
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-52 210.7 182 65.9
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-52 209.5 182 65.9
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.6e-51 205.7 166 70.5
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.5e-51 204.9 281 45.9
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.8e-50 203.4 357 41.5
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-49 201.1 232 55.2
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-49 199.9 179 63.7
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-49 199.9 182 61.5
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.0e-49 199.5 214 58.9
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.2e-49 199.1 182 63.7
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.9e-49 198.4 228 53.1
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.9e-49 198.4 162 69.1
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.4e-47 192.2 268 53.7
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-46 191.4 228 60.1
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.2e-46 188.3 169 63.9
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.0e-45 185.7 243 49.4
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.7e-44 184.1 179 58.1
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.3e-43 179.9 226 51.3
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-42 177.6 163 62.6
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 8.1e-42 175.3 314 39.5
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-41 174.1 224 50.4
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 1.2e-40 171.4 168 57.7
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-40 171.0 175 55.4
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-39 167.2 170 56.5
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 1.1e-38 164.9 201 48.8
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 1.9e-38 164.1 201 49.3
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-37 161.4 166 54.8
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.6e-37 159.5 215 50.7
Nitab4.5_0009477g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-34 149.8 150 71.3
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 1.1e-33 148.3 280 36.8
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-33 147.9 279 36.2
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-33 147.9 282 36.5
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.6e-32 142.1 81 87.7
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 3.8e-31 139.8 200 43.5
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.9e-31 139.4 158 52.5
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.4e-31 139.0 140 55.0
Nitab4.5_0000040g0570 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.4e-30 136.0 83 90.4
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.7e-29 133.7 77 88.3
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 4.6e-29 132.9 186 44.1
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.9e-29 132.1 139 54.7
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.9e-29 132.1 149 53.0
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-28 130.6 145 51.0
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 8.7e-28 128.6 197 40.6
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.9e-27 127.5 140 52.9
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.6e-27 125.9 134 54.5
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 9.6e-27 125.2 140 53.6
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 1.8e-25 120.9 183 39.9
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.0e-25 118.6 104 59.6
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.4e-22 111.3 398 26.9
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.1e-22 109.0 124 53.2
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-21 108.2 60 90.0
Nitab4.5_0000573g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-20 105.1 132 50.0
Nitab4.5_0002701g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-20 105.1 116 50.9
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 1.9e-19 100.9 144 45.1
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.4e-19 99.0 53 90.6
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.3e-18 98.2 179 36.9
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.7e-18 96.7 105 54.3
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.2e-18 95.9 159 41.5
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-17 94.7 81 60.5
Nitab4.5_0000109g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-17 92.8 51 88.2
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.0e-17 92.0 52 88.5
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-16 91.3 52 82.7
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 1.5e-16 91.3 225 31.1
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 1.5e-16 91.3 107 49.5
Solyc01g066890.2 Solanum lycopersicum HOM05D003617 ORTHO05D007165 2.6e-16 90.5 185 34.6
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.4e-16 90.1 139 39.6
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.8e-16 89.4 273 33.3
CAN.G1451.2 Capsicum annuum HOM05D003617 ORTHO05D007165 2.2e-15 87.4 232 30.6
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-15 87.4 72 63.9
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 2.2e-15 87.4 214 33.6
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 2.9e-15 87.0 116 46.6
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.8e-15 86.7 154 36.4
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-14 84.7 86 54.7
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 5.5e-14 82.8 96 52.1
PGSC0003DMG400046986 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-13 81.6 163 35.0
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-12 78.2 178 35.4
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-12 77.8 142 40.8
Nitab4.5_0004591g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-12 77.4 48 79.2
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 6.7e-12 75.9 88 47.7
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.5e-11 73.9 87 47.1
Nitab4.5_0006852g0060 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.4e-11 72.4 45 75.6
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-09 68.6 34 85.3
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.1e-09 68.6 350 25.1
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-09 68.2 91 45.1
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 1.8e-09 67.8 177 28.8
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-09 66.2 113 38.9
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.9e-09 65.9 89 46.1
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.0e-09 65.5 36 75.0
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.0e-09 65.5 89 46.1
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.5e-08 64.7 31 87.1
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.6e-08 63.9 95 41.1
PGSC0003DMG400035401 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.6e-08 63.9 83 43.4
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 3.4e-08 63.5 94 42.6
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-08 63.2 110 39.1
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.8e-08 62.8 32 84.4
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.6e-08 62.4 93 44.1
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-07 62.0 106 40.6
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.0e-07 59.7 34 73.5
PGSC0003DMG400034694 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.0e-07 59.7 89 38.2
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.5e-07 59.3 93 39.8
CAN.G810.1 Capsicum annuum HOM05D003617 ORTHO05D007165 1.1e-06 58.5 109 35.8
CAN.G495.5 Capsicum annuum HOM05D003617 ORTHO05D007165 1.4e-06 58.2 69 42.0
Peaxi162Scf00190g00514 Petunia axillaris HOM05D003617 ORTHO05D007165 2.5e-06 57.4 169 29.0
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.2e-06 56.6 34 73.5


User provided reference genes

Program Settings