Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000053g0200 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.5e-146 521.5 252 100.0
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.7e-76 290.0 300 54.3
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.2e-43 179.5 303 39.3
Nitab4.5_0000157g0100 Nicotiana tabacum HOM05D000007 ORTHO05D007252 8.8e-41 171.4 266 39.8
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 7.8e-29 131.7 180 41.1
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 7.8e-29 131.7 180 41.1
Nitab4.5_0003898g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.3e-28 131.0 150 46.7
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 2.3e-28 130.2 296 29.7
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 1.1e-27 127.9 293 31.4
Nitab4.5_0000157g0110 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.5e-27 127.5 255 36.9
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 1.9e-27 127.1 181 38.7
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 1.0e-25 121.3 293 31.1
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 1.8e-25 120.6 146 45.9
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 5.2e-25 119.0 293 30.4
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 3.2e-22 109.8 184 37.5
Nitab4.5_0001504g0060 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.9e-19 100.5 124 44.4
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.7e-18 95.9 266 30.1
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.2e-17 92.4 290 30.0
Oeu028485.1 Olea europaea HOM05D000007 ORTHO05D007252 1.2e-16 91.3 147 36.1
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.5e-16 88.6 295 27.8
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 1.7e-15 87.4 282 28.0
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.7e-15 87.4 249 27.7
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 8.3e-15 85.1 298 25.8
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 1.4e-14 84.3 296 27.4
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.1e-14 82.8 285 28.8
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.2e-14 81.6 277 27.4
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.1e-13 80.5 282 27.7
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 2.7e-13 80.1 302 27.2
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 3.5e-13 79.7 291 26.1
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-13 79.7 282 27.7
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-13 79.7 294 28.6
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 4.6e-13 79.3 228 27.6
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-12 77.8 291 27.5
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 3.0e-12 76.6 289 25.6
Lj4A650T22 Lonicera japonica HOM05D013022 ORTHO05D007252 5.1e-12 75.9 325 22.8
Lj4A649T29 Lonicera japonica HOM05D013022 ORTHO05D007252 8.6e-12 75.1 221 26.7
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 1.5e-11 74.3 111 38.7
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.5e-11 74.3 283 27.6
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.9e-11 73.9 293 24.9
Lj4A648G14 Lonicera japonica HOM05D013022 ORTHO05D007252 2.5e-11 73.6 221 25.8
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.2e-10 71.2 285 26.3
Nitab4.5_0007469g0030 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.2e-10 71.2 89 48.3
MBI15_g31025_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 1.6e-10 70.9 234 27.4
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.6e-10 70.9 286 26.9
Nitab4.5_0007469g0020 Nicotiana tabacum HOM05D000007 ORTHO05D007252 4.7e-10 69.3 150 35.3
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.7e-10 69.3 284 28.9
TAR371G0740 Trochodendron aralioides HOM05D000007 ORTHO05D000017 8.1e-10 68.6 184 29.3
Oeu056889.1 Olea europaea HOM05D000007 ORTHO05D007252 1.1e-09 68.2 288 23.6
SGA_v2.0_scaffold13G06731 Striga asiatica HOM05D000007 ORTHO05D007252 2.3e-09 67.0 282 24.5
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 8.9e-09 65.1 293 23.2
CAN.G1209.3 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-08 64.7 230 24.8
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.5e-08 64.3 295 26.4
Dinv44144 Davidia involucrata HOM05D000007 ORTHO05D000039 4.4e-08 62.8 242 22.3
CAN.G1076.9 Capsicum annuum HOM05D009844 ORTHO05D007252 9.9e-08 61.6 190 26.8
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 9.9e-08 61.6 242 28.9
Oeu026989.1 Olea europaea HOM05D000007 ORTHO05D007252 9.9e-08 61.6 312 22.8
Sopen09g036270 Solanum pennellii HOM05D009844 ORTHO05D007252 9.9e-08 61.6 299 24.1
Nn1g09856 Nelumbo nucifera HOM05D006664 ORTHO05D009007 1.3e-07 61.2 174 29.3
FAN09G0290 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.2e-07 60.5 146 28.1
Sopen09g035440 Solanum pennellii HOM05D009844 ORTHO05D007252 2.2e-07 60.5 186 24.7
Peaxi162Scf00783g00335 Petunia axillaris HOM05D009844 ORTHO05D007252 3.7e-07 59.7 310 24.5
Dinv02623 Davidia involucrata HOM05D000007 ORTHO05D007252 4.9e-07 59.3 208 26.4
Peaxi162Scf00185g00820 Petunia axillaris HOM05D009844 ORTHO05D007252 4.9e-07 59.3 209 26.8
Solyc09g092540.1 Solanum lycopersicum HOM05D009844 ORTHO05D007252 4.9e-07 59.3 186 24.7
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 8.3e-07 58.5 68 41.2
PSO017G6823 Papaver somniferum HOM05D000007 ORTHO05D000017 8.3e-07 58.5 84 32.1
Solyc09g098350.4 Solanum lycopersicum HOM05D009844 ORTHO05D007252 1.1e-06 58.2 299 23.7
Eucgr.I00068 Eucalyptus grandis HOM05D000007 ORTHO05D000039 1.4e-06 57.8 129 31.0
PGSC0003DMG400036554 Solanum tuberosum HOM05D009844 ORTHO05D007252 1.4e-06 57.8 187 25.1
FvH4_3g15810 Fragaria vesca HOM05D000007 ORTHO05D000017 1.9e-06 57.4 197 27.9
FAN11G2222 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.9e-06 57.4 197 27.9
Nitab4.5_0000697g0050 Nicotiana tabacum HOM05D009844 ORTHO05D007252 1.9e-06 57.4 153 30.7
Nitab4.5_0005219g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.9e-06 57.4 145 33.1
Oeu039143.1 Olea europaea HOM05D000007 ORTHO05D007252 1.9e-06 57.4 293 22.2
EL10Ac2g04216 Beta vulgaris HOM05D031416 ORTHO05D007252 2.4e-06 57.0 182 26.4
Oeu051380.1 Olea europaea HOM05D000007 ORTHO05D007252 2.4e-06 57.0 297 23.6
Rhsim03G0071600 Rhododendron simsii HOM05D019855 ORTHO05D018548 2.4e-06 57.0 205 23.9
CAN.G650.16 Capsicum annuum HOM05D000007 ORTHO05D000039 3.2e-06 56.6 115 34.8
Dinv16550 Davidia involucrata HOM05D000171 ORTHO05D000101 3.2e-06 56.6 67 43.3
Dinv16552 Davidia involucrata HOM05D000171 ORTHO05D000101 3.2e-06 56.6 68 41.2
FAN21G0181 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.1e-06 56.2 197 27.4
FAN25G2691 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.1e-06 56.2 197 27.9
Medtr4g023130 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-06 56.2 113 31.0
Oeu031249.1 Olea europaea HOM05D000007 ORTHO05D000039 7.1e-06 55.5 55 49.1
Psat3g146480 Pisum sativum HOM05D000007 ORTHO05D000017 7.1e-06 55.5 78 38.5
FAN09G2242 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.2e-06 55.1 114 31.6
HanXRQChr05g0137821 Helianthus annuus HOM05D000171 ORTHO05D009073 9.2e-06 55.1 169 26.6
PGSC0003DMG400021626 Solanum tuberosum HOM05D009844 ORTHO05D007252 9.2e-06 55.1 191 26.7


User provided reference genes

Program Settings