Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 2.3e-57 225.3 114 100.0
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 7.3e-43 177.2 129 77.5
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 2.7e-21 105.5 119 56.3
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 1.0e-20 103.6 123 56.1
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 6.6e-20 100.9 116 50.9
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.5e-19 99.8 116 50.0
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.9e-14 82.8 121 40.5
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 3.2e-14 82.0 122 45.1
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.2e-14 82.0 121 43.8
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 5.4e-14 81.3 128 44.5
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 2.1e-13 79.3 114 44.7
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.6e-13 78.2 122 41.8
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 4.6e-13 78.2 121 44.6
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 4.6e-13 78.2 117 44.4
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 6.0e-13 77.8 121 43.0
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 6.0e-13 77.8 114 44.7
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 7.9e-13 77.4 114 45.6
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 7.9e-13 77.4 118 40.7
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 7.9e-13 77.4 120 40.0
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 1.0e-12 77.0 109 46.8
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.8e-12 76.3 137 40.1
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 1.8e-12 76.3 127 43.3
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 3.0e-12 75.5 121 42.1
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 3.0e-12 75.5 127 37.8
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.9e-12 75.1 121 43.0
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 3.9e-12 75.1 121 42.1
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 6.7e-12 74.3 128 40.6
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 8.7e-12 73.9 128 45.3
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 1.1e-11 73.6 122 42.6
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 2.5e-11 72.4 122 41.0
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 2.5e-11 72.4 134 40.3
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 2.5e-11 72.4 134 40.3
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 4.3e-11 71.6 121 39.7
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 4.3e-11 71.6 131 40.5
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 5.6e-11 71.2 116 44.8
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 7.4e-11 70.9 122 39.3
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 9.6e-11 70.5 133 40.6
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 9.6e-11 70.5 128 39.8
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 9.6e-11 70.5 115 41.7
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 2.8e-10 68.9 126 38.9
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 2.8e-10 68.9 131 36.6
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.6e-10 68.6 130 38.5
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 4.8e-10 68.2 128 39.8
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 4.8e-10 68.2 125 40.0
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 6.2e-10 67.8 130 38.5
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 8.1e-10 67.4 130 39.2
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 8.1e-10 67.4 145 36.6
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.1e-09 67.0 113 40.7
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.1e-09 67.0 127 37.8
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.1e-09 67.0 127 38.6
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.1e-09 67.0 122 38.5
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.1e-09 67.0 137 36.5
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 1.4e-09 66.6 110 39.1
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 1.8e-09 66.2 122 41.0
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 1.8e-09 66.2 122 41.0
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 1.8e-09 66.2 146 34.9
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.8e-09 66.2 119 41.2
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.8e-09 66.2 126 35.7
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.4e-09 65.9 144 33.3
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.4e-09 65.9 127 38.6
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.4e-09 65.9 130 40.8
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 2.4e-09 65.9 123 38.2
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 3.1e-09 65.5 116 38.8
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 3.1e-09 65.5 116 38.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.1e-09 65.5 107 41.1
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 9.0e-09 63.9 129 38.0
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 9.0e-09 63.9 115 40.9
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.2e-08 63.5 145 35.9
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.2e-08 63.5 146 37.7
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.5e-08 63.2 139 33.8
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.0e-08 62.8 109 40.4
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 2.6e-08 62.4 147 36.7
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.6e-08 62.4 134 36.6
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.4e-08 62.0 125 36.0
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.8e-08 61.2 102 41.2
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 9.9e-08 60.5 123 35.0
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 9.9e-08 60.5 124 37.9
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 1.3e-07 60.1 139 36.0
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.3e-07 60.1 157 36.3
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.7e-07 59.7 119 38.7
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 2.2e-07 59.3 88 40.9
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 3.8e-07 58.5 122 36.9
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.9e-07 58.2 122 36.9
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 6.4e-07 57.8 114 34.2
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.4e-06 56.6 118 37.3
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.9e-06 56.2 142 35.2
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 1.9e-06 56.2 123 35.0
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.4e-06 55.8 122 36.1
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 4.2e-06 55.1 112 35.7
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 5.5e-06 54.7 136 35.3
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 7.1e-06 54.3 129 31.0
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 7.1e-06 54.3 129 31.0


User provided reference genes

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