Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 5.3e-94 347.8 194 100.0
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.3e-47 193.7 170 65.3
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 6.8e-41 171.4 211 52.1
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 3.4e-40 169.1 169 59.2
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 4.4e-40 168.7 169 58.6
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 5.8e-40 168.3 169 56.2
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 9.8e-40 167.5 169 58.6
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 2.4e-38 162.9 164 60.4
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.6e-34 150.2 135 58.5
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 1.6e-34 150.2 171 50.9
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 2.1e-34 149.8 135 57.8
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 2.8e-34 149.4 203 46.8
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 1.1e-33 147.5 154 53.2
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.4e-33 147.1 163 52.1
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 1.4e-33 147.1 171 57.9
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 4.0e-33 145.6 172 48.3
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 6.8e-33 144.8 163 50.3
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.2e-32 144.1 148 54.1
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.2e-32 144.1 172 48.3
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 1.5e-32 143.7 156 51.9
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.5e-32 143.7 163 50.9
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 5.8e-32 141.7 156 51.9
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 7.5e-32 141.4 167 49.1
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 2.2e-31 139.8 148 51.4
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 2.2e-31 139.8 158 50.0
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 4.9e-31 138.7 152 52.6
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 6.4e-31 138.3 148 52.0
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 8.3e-31 137.9 151 48.3
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 8.3e-31 137.9 156 51.3
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 8.3e-31 137.9 169 49.7
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 8.3e-31 137.9 123 69.1
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 1.4e-30 137.1 136 51.5
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 1.4e-30 137.1 156 59.0
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 1.9e-30 136.7 122 58.2
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 5.4e-30 135.2 172 47.1
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 9.2e-30 134.4 167 46.7
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.6e-29 133.7 132 52.3
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 2.1e-29 133.3 171 48.5
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 2.1e-29 133.3 168 48.2
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 2.7e-29 132.9 135 51.9
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 4.6e-29 132.1 159 46.5
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 7.8e-29 131.3 122 54.9
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 1.3e-28 130.6 171 57.9
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 1.7e-28 130.2 139 48.9
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 2.3e-28 129.8 122 54.1
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 3.0e-28 129.4 167 55.1
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 3.0e-28 129.4 151 47.7
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 3.9e-28 129.0 122 53.3
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 3.9e-28 129.0 122 53.3
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 6.6e-28 128.3 165 46.1
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 8.6e-28 127.9 169 45.6
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 8.6e-28 127.9 121 55.4
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 8.6e-28 127.9 135 63.7
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 1.1e-27 127.5 130 53.1
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.1e-27 127.5 161 47.8
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.1e-27 127.5 120 55.8
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 1.5e-27 127.1 121 55.4
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.9e-27 126.7 139 48.2
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 2.5e-27 126.3 128 51.6
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.5e-27 126.3 161 47.8
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 2.5e-27 126.3 121 62.0
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 3.3e-27 125.9 164 43.3
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 7.3e-27 124.8 170 45.3
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 7.3e-27 124.8 137 48.2
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 1.2e-26 124.0 122 51.6
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 2.1e-26 123.2 131 48.9
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 4.7e-26 122.1 145 49.0
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.7e-26 122.1 112 56.2
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 6.2e-26 121.7 162 45.1
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 6.2e-26 121.7 152 45.4
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 1.1e-25 120.9 145 51.0
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 1.4e-25 120.6 173 42.8
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.4e-25 120.6 122 50.0
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 2.3e-25 119.8 122 49.2
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 3.1e-25 119.4 122 52.5
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 3.1e-25 119.4 122 50.0
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 4.0e-25 119.0 165 46.1
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 5.2e-25 118.6 118 50.0
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 5.2e-25 118.6 133 46.6
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 5.2e-25 118.6 120 50.0
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 8.9e-25 117.9 122 49.2
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 8.9e-25 117.9 138 43.5
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 1.5e-24 117.1 122 49.2
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 2.6e-24 116.3 159 43.4
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 3.4e-24 115.9 142 46.5
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 3.4e-24 115.9 135 48.9
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 3.4e-24 115.9 122 50.0
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 3.4e-24 115.9 122 50.0
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 4.4e-24 115.5 194 41.8
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 7.6e-24 114.8 122 49.2
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 7.6e-24 114.8 122 49.2
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 9.9e-24 114.4 122 46.7
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.7e-23 113.6 174 44.8
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 2.2e-23 113.2 123 50.4
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 2.9e-23 112.8 122 48.4
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 2.9e-23 112.8 122 48.4
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 3.8e-23 112.5 157 46.5
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 4.9e-23 112.1 122 49.2
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 6.4e-23 111.7 169 42.6
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 1.1e-22 110.9 122 48.4
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 1.1e-22 110.9 168 41.1
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.4e-22 110.5 168 41.1
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.4e-22 110.5 175 42.3
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 1.6e-21 107.1 123 47.2
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 6.0e-21 105.1 135 44.4
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.3e-20 104.0 156 39.7
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 2.3e-20 103.2 195 35.4
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 3.0e-20 102.8 122 47.5
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 3.9e-20 102.4 134 41.8
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 5.1e-20 102.1 110 49.1
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 5.6e-19 98.6 86 52.3
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 6.2e-18 95.1 102 49.0
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.2e-15 86.7 93 59.1
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 8.4e-15 84.7 117 47.9
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 1.9e-14 83.6 160 34.4
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 1.2e-13 80.9 74 54.1
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.2e-13 80.9 79 51.9
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.6e-13 80.5 70 58.6
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 3.5e-13 79.3 122 38.5
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 1.1e-09 67.8 155 43.9
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 7.6e-08 61.6 85 37.6
Nitab4.5_0002582g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.1e-06 57.8 69 53.6


User provided reference genes

Program Settings