Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000050g0130 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.7e-75 285.8 134 100.0
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 4.4e-47 191.4 130 72.3
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 4.1e-29 131.7 142 48.6
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 2.4e-21 105.9 131 42.7
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 2.4e-21 105.9 126 41.3
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 4.1e-21 105.1 127 40.2
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 6.0e-20 101.3 121 44.6
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 7.8e-20 100.9 125 44.8
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 7.8e-20 100.9 125 44.8
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 3.0e-19 99.0 127 37.0
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 3.9e-19 98.6 127 37.8
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 3.9e-19 98.6 133 42.1
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 6.6e-19 97.8 119 39.5
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 6.6e-19 97.8 125 43.2
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 6.6e-19 97.8 125 43.2
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 8.6e-19 97.4 121 38.8
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 1.1e-18 97.1 123 39.0
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 1.5e-18 96.7 127 39.4
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-18 96.7 127 38.6
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-18 96.7 127 39.4
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-18 96.7 127 39.4
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 1.9e-18 96.3 122 42.6
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 3.3e-18 95.5 127 37.8
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 4.3e-18 95.1 130 39.2
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 1.6e-17 93.2 126 37.3
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.6e-17 93.2 116 41.4
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 1.6e-17 93.2 123 41.5
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 1.6e-17 93.2 128 38.3
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 2.1e-17 92.8 127 40.2
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 2.8e-17 92.4 115 40.0
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 3.6e-17 92.0 128 35.9
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 3.6e-17 92.0 80 53.8
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 4.7e-17 91.7 122 41.0
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 8.1e-17 90.9 129 38.0
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.4e-16 90.1 117 40.2
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.4e-16 90.1 75 58.7
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 1.4e-16 90.1 126 34.1
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.4e-16 90.1 121 40.5
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 1.4e-16 90.1 118 41.5
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 1.8e-16 89.7 126 38.9
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 2.3e-16 89.4 128 37.5
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 4.0e-16 88.6 126 37.3
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.0e-16 88.6 126 37.3
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 4.0e-16 88.6 130 38.5
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 5.2e-16 88.2 132 37.9
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 6.8e-16 87.8 131 36.6
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 6.8e-16 87.8 131 36.6
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 1.2e-15 87.0 128 36.7
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.2e-15 87.0 77 49.4
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.0e-15 86.3 132 37.1
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 2.6e-15 85.9 131 37.4
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 2.6e-15 85.9 125 38.4
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 3.4e-15 85.5 127 37.0
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 4.4e-15 85.1 76 51.3
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 4.4e-15 85.1 131 36.6
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 7.6e-15 84.3 118 38.1
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 9.9e-15 84.0 117 38.5
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 1.3e-14 83.6 127 33.9
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 1.7e-14 83.2 133 35.3
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 1.7e-14 83.2 126 32.5
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 1.7e-14 83.2 130 33.8
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 2.2e-14 82.8 125 36.0
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.2e-14 82.8 115 41.7
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 2.2e-14 82.8 122 37.7
Peaxi162Scf00104g00047 Petunia axillaris HOM05D000462 ORTHO05D005846 2.2e-14 82.8 85 45.9
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 2.9e-14 82.4 119 37.0
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.4e-13 80.1 116 37.9
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.4e-13 80.1 116 37.9
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 1.9e-13 79.7 133 33.1
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 1.9e-13 79.7 126 31.0
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 2.4e-13 79.3 127 33.1
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.4e-13 79.3 115 41.7
ECA240G2690 Erigeron canadensis HOM05D000462 ORTHO05D005846 7.1e-13 77.8 131 34.4
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 7.1e-13 77.8 117 36.8
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 9.2e-13 77.4 119 35.3
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 9.2e-13 77.4 113 36.3
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 9.2e-13 77.4 123 33.3
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 1.6e-12 76.6 133 35.3
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 1.6e-12 76.6 125 33.6
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 2.1e-12 76.3 119 35.3
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.7e-12 75.9 129 34.1
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 3.5e-12 75.5 79 48.1
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 3.5e-12 75.5 74 45.9
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 3.5e-12 75.5 126 38.1
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 3.5e-12 75.5 114 35.1
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 4.6e-12 75.1 123 36.6
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 6.0e-12 74.7 132 34.8
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 6.0e-12 74.7 117 35.9
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 7.8e-12 74.3 126 37.3
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 1.0e-11 73.9 79 46.8
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.0e-11 73.9 115 37.4
unitig_750.g28427 Utricularia gibba HOM05D000462 ORTHO05D005846 1.0e-11 73.9 128 37.5
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 1.3e-11 73.6 131 34.4
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 1.3e-11 73.6 132 34.8
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 1.3e-11 73.6 124 32.3
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 1.3e-11 73.6 131 32.1
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 1.7e-11 73.2 124 36.3
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 3.9e-11 72.0 128 35.2
FAN10G1699 Fragaria x ananassa HOM05D000462 ORTHO05D005846 3.9e-11 72.0 74 48.6
Oeu039097.1 Olea europaea HOM05D000462 ORTHO05D005846 3.9e-11 72.0 130 30.8
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 8.6e-11 70.9 101 35.6
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 8.6e-11 70.9 120 33.3
Peaxi162Scf01016g00003 Petunia axillaris HOM05D000462 ORTHO05D005846 1.5e-10 70.1 78 44.9
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 2.5e-10 69.3 141 32.6
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 2.5e-10 69.3 128 32.8
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 3.3e-10 68.9 78 44.9
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 3.3e-10 68.9 125 37.6
HanXRQChr01g0021801 Helianthus annuus HOM05D000462 ORTHO05D005846 4.3e-10 68.6 78 41.0
HanXRQChr13g0411631 Helianthus annuus HOM05D000462 ORTHO05D005846 4.3e-10 68.6 135 31.9
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 4.3e-10 68.6 128 33.6
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 5.6e-10 68.2 74 44.6
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 5.6e-10 68.2 126 31.0
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 7.3e-10 67.8 69 49.3
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 7.3e-10 67.8 63 52.4
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 1.2e-09 67.0 126 33.3
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 1.6e-09 66.6 115 34.8
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.6e-09 66.6 78 42.3
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.8e-09 65.9 124 33.9
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 2.8e-09 65.9 107 31.8
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 3.6e-09 65.5 117 34.2
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 4.7e-09 65.1 63 47.6
Solyc01g060370.2 Solanum lycopersicum HOM05D000462 ORTHO05D005846 4.7e-09 65.1 56 53.6
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 1.1e-08 63.9 115 33.9
ECA236G1772 Erigeron canadensis HOM05D000462 ORTHO05D005846 1.4e-08 63.5 79 43.0
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.4e-08 63.5 124 33.1
Nitab4.5_0002937g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 3.1e-08 62.4 73 43.8
Nitab4.5_0000216g0220 Nicotiana tabacum HOM05D010896 ORTHO05D011162 8.9e-08 60.8 73 41.1
Nitab4.5_0006917g0020 Nicotiana tabacum HOM05D010896 ORTHO05D011162 8.9e-08 60.8 72 41.7
Nitab4.5_0015349g0020 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.2e-07 60.5 73 39.7
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.5e-07 60.1 112 33.9
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.5e-07 60.1 112 33.9
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 3.4e-07 58.9 87 37.9
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 3.4e-07 58.9 50 56.0
Nitab4.5_0006031g0060 Nicotiana tabacum HOM05D010896 ORTHO05D011162 4.4e-07 58.5 58 39.7
Nitab4.5_0000090g0060 Nicotiana tabacum HOM05D000395 ORTHO05D000088 5.8e-07 58.2 84 41.7
Os06g0112300 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 5.8e-07 58.2 81 39.5
SalBow4G0706 Salvia bowleyana HOM05D009568 ORTHO05D011026 5.8e-07 58.2 77 36.4
Nitab4.5_0007949g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.7e-06 56.6 66 45.5
Lalb_Chr19g0126241 Lupinus albus HOM05D000395 ORTHO05D000088 4.9e-06 55.1 79 45.6
Aqoxy5G02746 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 6.4e-06 54.7 64 46.9
Nitab4.5_0002126g0050 Nicotiana tabacum HOM05D000395 ORTHO05D000088 6.4e-06 54.7 63 47.6
Nitab4.5_0005799g0040 Nicotiana tabacum HOM05D010896 ORTHO05D011162 6.4e-06 54.7 57 42.1
TWI73G1024 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 6.4e-06 54.7 82 35.4
unitig_749.g14241 Utricularia gibba HOM05D000462 ORTHO05D005846 6.4e-06 54.7 63 44.4
Sed0008220 Sechium edule HOM05D000395 ORTHO05D000088 8.4e-06 54.3 59 42.4
SGA_v2.0_scaffold204G41627 Striga asiatica HOM05D000395 ORTHO05D000088 8.4e-06 54.3 47 46.8


User provided reference genes

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