Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.6e-71 271.9 134 100.0
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.4e-30 134.4 81 82.7
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.6e-20 103.2 96 53.1
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.7e-19 99.8 99 53.5
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 3.0e-19 99.0 99 52.5
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 3.0e-19 99.0 96 52.1
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 5.1e-19 98.2 106 50.9
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 8.6e-19 97.4 96 52.1
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.5e-18 96.7 90 55.6
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.9e-18 96.3 95 50.5
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 3.3e-18 95.5 96 51.0
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 4.3e-18 95.1 96 52.1
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.6e-18 94.7 98 52.0
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.3e-18 94.4 99 50.5
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.6e-17 92.0 82 61.0
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-16 90.5 95 49.5
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-16 90.5 82 59.8
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-16 90.5 82 59.8
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 1.4e-16 90.1 96 47.9
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-16 89.7 91 51.6
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 1.8e-16 89.7 96 50.0
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 4.0e-16 88.6 93 51.6
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.0e-16 88.6 82 58.5
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 4.0e-16 88.6 96 50.0
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.8e-16 87.8 82 58.5
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.2e-15 87.0 93 46.2
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.6e-15 85.9 76 52.6
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-15 85.9 73 58.9
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 2.6e-15 85.9 85 51.8
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 3.4e-15 85.5 104 46.2
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-15 85.5 82 54.9
CAN.G67.13 Capsicum annuum HOM05D003617 ORTHO05D010478 7.6e-15 84.3 93 48.4
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 9.9e-15 84.0 96 45.8
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 1.3e-14 83.6 96 46.9
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 1.7e-14 83.2 93 48.4
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 1.7e-14 83.2 95 47.4
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.7e-14 83.2 96 46.9
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.9e-14 82.4 85 48.2
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 2.9e-14 82.4 98 43.9
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.7e-14 82.0 69 59.4
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.7e-14 82.0 69 59.4
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.7e-14 82.0 78 57.7
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-13 80.1 69 56.5
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-13 80.1 95 46.3
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.4e-13 80.1 96 43.8
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.4e-13 79.3 75 54.7
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.4e-13 79.3 96 45.8
Nitab4.5_0000419g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-13 79.0 69 58.0
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.2e-13 79.0 96 47.9
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 7.1e-13 77.8 92 44.6
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 7.1e-13 77.8 96 43.8
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.2e-13 77.4 78 56.4
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-12 77.0 73 54.8
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 2.7e-12 75.9 88 45.5
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.5e-12 75.5 106 43.4
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.7e-11 73.2 78 55.1
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 3.0e-11 72.4 83 49.4
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.0e-11 72.4 82 51.2
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 5.1e-11 71.6 61 54.1
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-10 70.5 83 45.8
Nitab4.5_0000078g0230 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-10 70.5 94 44.7
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-10 70.5 84 42.9
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 2.5e-10 69.3 61 52.5
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 3.3e-10 68.9 87 43.7
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.3e-10 68.9 67 52.2
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.3e-10 68.6 77 51.9
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.3e-10 68.6 71 54.9
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-10 68.2 66 54.5
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 9.6e-10 67.4 96 42.7
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 1.6e-09 66.6 82 46.3
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 3.6e-09 65.5 78 46.2
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.1e-09 64.3 73 43.8
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 8.1e-09 64.3 69 47.8
Nitab4.5_0004591g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-08 63.5 80 46.2
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.1e-08 62.4 58 51.7
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.0e-08 62.0 55 54.5
Nitab4.5_0000280g0160 Nicotiana tabacum HOM05D018533 ORTHO05D282992 3.4e-07 58.9 57 56.1
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.4e-07 58.5 79 39.2
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.6e-07 57.8 52 51.9
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-06 56.6 56 46.4
Nitab4.5_0000045g0140 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.2e-06 56.2 67 46.3
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.9e-06 55.8 70 42.9
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 4.9e-06 55.1 37 70.3
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 6.4e-06 54.7 96 36.5


User provided reference genes

Program Settings