Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000047g0240 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.3e-39 165.2 93 100.0
Nitab4.5_0000047g0220 Nicotiana tabacum HOM05D004638 ORTHO05D005443 6.6e-18 94.0 70 77.1
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 2.8e-16 88.6 80 65.0
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 4.0e-15 84.7 71 70.4
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 4.0e-15 84.7 71 70.4
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 4.4e-14 81.3 86 55.8
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 7.6e-14 80.5 80 57.5
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 1.7e-13 79.3 70 64.3
Nitab4.5_0000047g0210 Nicotiana tabacum HOM05D004638 ORTHO05D005443 4.9e-13 77.8 46 91.3
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 5.4e-12 74.3 80 56.2
Nitab4.5_0000047g0230 Nicotiana tabacum HOM05D004638 ORTHO05D005443 9.3e-12 73.6 43 90.7
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 9.3e-12 73.6 84 54.8
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 2.7e-11 72.0 68 61.8
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 1.0e-10 70.1 69 59.4
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 2.3e-10 68.9 89 48.3
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 2.3e-10 68.9 89 48.3
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 5.1e-10 67.8 62 64.5
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 5.1e-10 67.8 62 64.5
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 1.1e-09 66.6 72 52.8
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 1.9e-09 65.9 64 60.9
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 1.3e-08 63.2 86 47.7
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 1.6e-08 62.8 71 53.5
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 3.6e-08 61.6 87 46.0
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 4.8e-08 61.2 72 48.6
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 4.8e-08 61.2 71 50.7
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 8.1e-08 60.5 72 48.6
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 1.4e-07 59.7 87 46.0
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 3.1e-07 58.5 84 50.0
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 5.3e-07 57.8 87 44.8
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 5.3e-07 57.8 87 42.5
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 5.3e-07 57.8 87 47.1
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 5.3e-07 57.8 79 48.1
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.2e-06 56.6 81 44.4
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 1.5e-06 56.2 74 52.7
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 1.5e-06 56.2 81 45.7
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.5e-06 56.2 81 45.7
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 1.5e-06 56.2 84 40.5
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 2.0e-06 55.8 87 44.8
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 2.0e-06 55.8 86 39.5
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 2.6e-06 55.5 71 47.9
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 2.6e-06 55.5 83 43.4
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 4.4e-06 54.7 87 44.8
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 4.4e-06 54.7 87 42.5
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 4.4e-06 54.7 87 42.5
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 4.4e-06 54.7 87 42.5
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 4.4e-06 54.7 87 42.5
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 5.8e-06 54.3 87 43.7
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 5.8e-06 54.3 87 43.7
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 7.6e-06 53.9 87 44.8
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 7.6e-06 53.9 87 42.5
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 7.6e-06 53.9 87 42.5
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 7.6e-06 53.9 87 42.5
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 7.6e-06 53.9 87 42.5
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 9.9e-06 53.5 88 40.9
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 9.9e-06 53.5 80 45.0


User provided reference genes

Program Settings