Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000046g0220 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.5e-75 285.8 196 100.0
Nitab4.5_0004440g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.0e-25 117.9 62 87.1
Nitab4.5_0000149g0180 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-22 110.5 93 63.4
Nitab4.5_0001203g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.6e-18 97.1 54 81.5
Nitab4.5_0003930g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.9e-17 91.7 51 80.4
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.5e-15 84.7 62 58.1
Nitab4.5_0001370g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-14 84.3 46 76.1
Nitab4.5_0005772g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.2e-14 81.6 64 57.8
Nitab4.5_0008946g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.2e-14 81.6 64 57.8
Nitab4.5_0002244g0090 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.9e-13 78.2 46 71.7
Nitab4.5_0005741g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.0e-12 77.8 64 56.2
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.0e-12 77.8 62 54.8
Nitab4.5_0004033g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-12 77.4 46 71.7
Nitab4.5_0013592g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.3e-12 76.6 62 56.5
Nitab4.5_0000086g0290 Nicotiana tabacum HOM05D000077 ORTHO05D000552 6.7e-12 75.1 45 68.9
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.7e-12 75.1 60 56.7
Nitab4.5_0015192g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.7e-12 75.1 49 65.3
Nitab4.5_0001580g0080 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.5e-11 73.9 61 55.7
Nitab4.5_0005808g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.3e-11 72.4 49 61.2
Nitab4.5_0007743g0080 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.8e-10 69.7 37 81.1
Nitab4.5_0013705g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.8e-10 69.7 61 55.7
Nitab4.5_0000082g0450 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.2e-10 68.2 39 71.8
Nitab4.5_0004970g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.2e-10 68.2 52 55.8
Nitab4.5_0003518g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-09 67.8 60 53.3
Nitab4.5_0001839g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.4e-09 67.4 59 54.2
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.8e-09 67.0 58 51.7
Nitab4.5_0008054g0030 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.8e-09 67.0 62 54.8
Nitab4.5_0010408g0040 Nicotiana tabacum HOM05D004040 ORTHO05D000309 5.3e-09 65.5 37 73.0
Peaxi162Scf00009g02216 Petunia axillaris HOM05D004040 ORTHO05D306572 1.5e-08 63.9 68 45.6
Peaxi162Scf00090g00816 Petunia axillaris HOM05D004040 ORTHO05D000309 4.5e-08 62.4 58 46.6
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 4.5e-08 62.4 58 48.3
Nitab4.5_0006105g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.0e-07 61.2 62 48.4
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.0e-07 61.2 49 57.1
Peaxi162Scf00215g00316 Petunia axillaris HOM05D004040 ORTHO05D000309 1.3e-07 60.8 45 51.1
Nitab4.5_0010359g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.7e-07 60.5 49 51.0
Peaxi162Scf00052g00714 Petunia axillaris HOM05D004040 ORTHO05D000309 1.7e-07 60.5 58 46.6
Peaxi162Scf00092g00218 Petunia axillaris HOM05D004040 ORTHO05D000309 1.7e-07 60.5 66 39.4
Peaxi162Scf00100g00811 Petunia axillaris HOM05D004040 ORTHO05D000309 1.7e-07 60.5 58 46.6
Peaxi162Scf00897g00038 Petunia axillaris HOM05D004040 ORTHO05D000309 1.7e-07 60.5 58 46.6
Nitab4.5_0003332g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.2e-07 60.1 41 58.5
Peaxi162Scf01215g00003 Petunia axillaris HOM05D004040 ORTHO05D000309 2.2e-07 60.1 58 46.6
Nitab4.5_0006425g0070 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.9e-07 59.7 58 43.1
Nitab4.5_0029284g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.9e-07 59.7 62 50.0
Nitab4.5_0001942g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 3.8e-07 59.3 59 39.0
CAN.G137.62 Capsicum annuum HOM05D000541 ORTHO05D000137 6.5e-07 58.5 56 44.6
Nitab4.5_0009037g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.5e-07 58.2 41 56.1
Nitab4.5_0000319g0130 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.1e-06 57.8 61 37.7
CAN.G98.15 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-06 57.0 60 48.3
Nitab4.5_0003328g0050 Nicotiana tabacum HOM05D004040 ORTHO05D284233 1.9e-06 57.0 54 51.9
Nitab4.5_0008345g0030 Nicotiana tabacum HOM05D018136 ORTHO05D000309 2.5e-06 56.6 34 79.4
Solyc05g017863.1 Solanum lycopersicum HOM05D004040 ORTHO05D000309 3.2e-06 56.2 41 53.7
Nitab4.5_0003187g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.2e-06 55.8 62 43.5
Nitab4.5_0005728g0080 Nicotiana tabacum HOM05D004040 ORTHO05D000309 4.2e-06 55.8 59 39.0
Peaxi162Scf00050g02421 Petunia axillaris HOM05D004040 ORTHO05D000309 5.5e-06 55.5 59 40.7
Peaxi162Scf00099g01610 Petunia axillaris HOM05D004040 ORTHO05D000309 5.5e-06 55.5 59 40.7
Peaxi162Scf00100g00020 Petunia axillaris HOM05D004040 ORTHO05D000309 5.5e-06 55.5 59 40.7
Nitab4.5_0000615g0150 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.4e-06 54.7 58 46.6
Nitab4.5_0022073g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 9.4e-06 54.7 41 51.2


User provided reference genes

Program Settings