Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 6.3e-100 367.5 189 100.0
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 1.5e-85 319.7 190 86.8
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 1.3e-81 306.6 187 82.4
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 2.9e-81 305.4 189 81.5
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 3.8e-81 305.1 186 80.6
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 6.6e-81 304.3 186 80.6
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 4.7e-79 298.1 186 78.0
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 8.9e-78 293.9 211 73.5
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 1.0e-70 270.4 200 71.5
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 5.2e-70 268.1 184 73.4
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 6.8e-70 267.7 177 74.6
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 8.9e-70 267.3 202 69.3
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 8.3e-68 260.8 185 70.8
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 9.2e-67 257.3 191 69.1
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 6.0e-66 254.6 196 66.8
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 7.8e-66 254.2 197 66.5
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 7.8e-66 254.2 196 67.3
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 1.0e-65 253.8 200 68.0
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 1.0e-65 253.8 199 66.8
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 3.0e-65 252.3 174 75.3
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 5.0e-65 251.5 196 69.9
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 1.9e-64 249.6 188 69.7
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 2.5e-64 249.2 176 69.3
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 4.3e-64 248.4 171 71.3
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 7.3e-64 247.7 193 67.4
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 1.2e-63 246.9 183 67.8
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 1.6e-63 246.5 196 66.8
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 2.1e-63 246.1 180 70.0
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 2.8e-63 245.7 176 69.3
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 3.6e-63 245.4 180 69.4
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.4e-62 243.4 190 63.7
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 1.8e-62 243.0 196 63.8
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 2.3e-62 242.7 176 72.2
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 3.1e-62 242.3 176 72.2
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 4.0e-62 241.9 176 71.0
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 1.5e-61 240.0 173 70.5
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 2.6e-61 239.2 244 56.6
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 7.5e-61 237.7 176 73.3
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 7.5e-61 237.7 195 65.6
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 7.5e-61 237.7 182 65.4
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 9.8e-61 237.3 189 66.7
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 1.7e-60 236.5 190 63.7
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 2.2e-60 236.1 218 59.6
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 3.7e-60 235.3 200 62.5
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 3.7e-60 235.3 193 64.8
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 6.4e-60 234.6 189 65.6
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 8.3e-60 234.2 195 62.6
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 8.3e-60 234.2 195 62.6
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 1.1e-59 233.8 187 63.6
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.4e-59 233.4 193 64.8
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 1.4e-59 233.4 156 76.3
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 1.9e-59 233.0 198 64.1
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 1.9e-59 233.0 178 68.0
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 2.4e-59 232.6 175 68.6
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 2.4e-59 232.6 179 65.9
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 7.0e-59 231.1 187 64.2
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 9.2e-59 230.7 199 60.8
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 2.1e-58 229.6 187 65.2
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 7.8e-58 227.6 178 65.7
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 3.0e-57 225.7 173 66.5
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 3.3e-56 222.2 163 65.6
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 4.3e-56 221.9 192 59.9
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 3.1e-54 215.7 173 63.6
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 4.0e-54 215.3 163 64.4
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 5.2e-54 214.9 204 57.8
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 5.2e-54 214.9 187 64.2
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 6.8e-54 214.5 191 58.1
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 1.5e-53 213.4 179 62.6
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 2.6e-53 212.6 185 61.1
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 5.8e-53 211.5 181 63.0
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 5.8e-53 211.5 162 63.6
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 4.9e-52 208.4 195 57.4
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 8.3e-52 207.6 196 56.6
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 1.4e-51 206.8 191 59.7
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 1.9e-51 206.5 184 60.9
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 5.4e-51 204.9 116 86.2
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 4.6e-50 201.8 183 57.9
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 1.3e-49 200.3 189 58.7
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 2.3e-49 199.5 185 58.9
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 1.9e-48 196.4 190 55.8
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 6.2e-47 191.4 193 55.4
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 1.8e-46 189.9 170 59.4
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 2.4e-46 189.5 170 58.8
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 5.2e-46 188.3 164 61.6
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 2.0e-45 186.4 167 60.5
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 2.0e-45 186.4 191 51.8
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 4.4e-45 185.3 167 59.9
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 2.9e-44 182.6 168 60.1
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 1.9e-43 179.9 168 58.3
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 2.4e-43 179.5 168 59.5
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 2.4e-43 179.5 168 59.5
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 4.2e-43 178.7 170 58.2
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 5.4e-43 178.3 168 58.3
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 5.4e-43 178.3 168 58.3
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 1.6e-42 176.8 156 59.6
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 2.1e-42 176.4 170 57.6
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 2.7e-42 176.0 170 57.6
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 2.7e-42 176.0 170 58.8
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 7.8e-42 174.5 173 53.8
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 1.0e-41 174.1 170 57.1
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 6.6e-41 171.4 171 57.3
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 1.5e-40 170.2 171 56.7
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 4.3e-40 168.7 168 53.6
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 2.4e-38 162.9 159 53.5
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 4.9e-36 155.2 170 52.9
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 1.6e-34 150.2 168 53.0
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 5.1e-33 145.2 127 63.0
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 2.8e-31 139.4 85 81.2
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 1.8e-30 136.7 182 41.8
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 2.4e-27 126.3 86 72.1
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 6.9e-22 108.2 169 41.4
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 3.8e-20 102.4 184 37.0
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 4.9e-20 102.1 99 57.6
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 1.1e-16 90.9 189 32.3
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 6.5e-12 75.1 113 36.3
Ca_19566_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 6.3e-07 58.5 44 63.6


User provided reference genes

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