Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 0.0e+00 1265.0 636 100.0
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 0.0e+00 1184.1 682 89.7
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 6.4e-306 1053.5 634 85.0
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 1.5e-302 1042.3 634 84.2
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 1.6e-301 1038.9 634 83.8
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 8.7e-295 1016.5 630 82.2
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 2.1e-240 835.9 607 75.0
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 6.8e-239 830.9 642 67.0
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 2.0e-235 819.3 629 67.2
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 9.5e-233 810.4 634 67.7
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 3.6e-224 781.9 645 62.9
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 6.2e-224 781.2 634 64.4
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 5.2e-223 778.1 598 66.2
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 5.2e-223 778.1 642 64.5
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 2.6e-222 775.8 637 63.3
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 7.5e-222 774.2 627 63.8
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 7.5e-222 774.2 601 67.2
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 1.3e-221 773.5 632 63.4
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 4.1e-220 768.5 644 61.3
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 1.2e-219 766.9 603 65.2
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 6.0e-219 764.6 630 63.0
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 1.0e-218 763.8 633 62.7
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 9.5e-217 757.3 624 62.2
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 4.7e-216 755.0 634 64.7
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 1.4e-215 753.4 627 61.1
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 1.5e-214 750.0 626 62.8
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 4.1e-212 741.9 633 61.1
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 2.7e-211 739.2 644 60.6
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 7.8e-211 737.6 633 61.0
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.3e-210 736.9 629 61.5
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 1.5e-209 733.4 645 60.0
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.9e-209 733.0 633 59.4
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 7.3e-209 731.1 628 60.7
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 9.5e-209 730.7 631 59.6
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 1.2e-208 730.3 628 59.9
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 1.2e-208 730.3 642 58.7
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 2.1e-208 729.6 627 60.9
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 1.8e-207 726.5 633 60.3
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 4.0e-207 725.3 645 57.7
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.6e-206 722.6 633 60.0
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 1.3e-205 720.3 597 62.6
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 1.7e-205 719.9 631 59.4
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 3.7e-205 718.8 635 59.1
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 3.7e-205 718.8 624 60.1
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 4.9e-205 718.4 633 58.8
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 2.4e-204 716.1 626 59.4
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 7.1e-204 714.5 637 57.8
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 9.2e-204 714.1 624 59.9
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 2.7e-203 712.6 634 60.6
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 6.0e-203 711.4 637 59.2
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 6.0e-203 711.4 635 60.0
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 1.0e-202 710.7 625 59.2
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.3e-202 710.3 636 60.4
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 1.7e-202 709.9 553 65.5
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 1.1e-201 707.2 637 60.3
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 1.1e-201 707.2 635 60.0
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 1.2e-200 703.7 627 59.8
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 2.1e-200 703.0 628 57.8
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 8.1e-200 701.0 634 59.8
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 1.1e-199 700.7 634 57.6
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 2.4e-199 699.5 607 61.3
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 8.9e-199 697.6 625 58.4
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.5e-198 696.8 637 57.3
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 1.5e-198 696.8 629 59.5
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 4.4e-198 695.3 601 61.1
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.2e-195 687.2 636 58.8
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 1.3e-194 683.7 597 60.1
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 2.8e-192 676.0 632 57.0
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 1.4e-191 673.7 631 56.9
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 3.1e-191 672.5 638 57.5
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 7.6e-190 667.9 571 63.6
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 4.9e-189 665.2 631 57.2
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 6.4e-189 664.8 623 56.0
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 8.4e-189 664.5 606 57.9
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 1.1e-188 664.1 633 57.0
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 1.4e-188 663.7 611 58.1
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 1.4e-188 663.7 636 56.9
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 1.4e-188 663.7 606 58.4
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.9e-188 663.3 611 58.1
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 4.2e-188 662.1 626 55.8
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 9.3e-188 661.0 630 56.2
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 2.3e-186 656.4 631 56.4
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 8.7e-186 654.4 629 56.9
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 8.7e-186 654.4 623 57.8
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 1.9e-185 653.3 629 56.8
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 1.9e-185 653.3 629 56.8
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.1e-184 649.8 680 53.5
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 2.8e-184 649.4 606 57.4
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 2.9e-181 639.4 637 54.6
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 8.4e-181 637.9 625 57.1
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 1.0e-178 630.9 609 54.4
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 6.7e-178 628.2 638 57.2
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 3.3e-177 625.9 588 56.0
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 5.3e-175 618.6 634 54.6
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 4.5e-174 615.5 639 52.9
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 2.2e-173 613.2 607 54.7
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 2.2e-173 613.2 630 52.1
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.9e-172 610.1 643 51.5
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 4.6e-171 605.5 608 53.5
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 3.9e-170 602.4 641 52.4
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 6.3e-168 595.1 625 51.8
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 7.6e-166 588.2 566 58.1
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 7.4e-161 571.6 469 62.9
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 4.8e-160 568.9 584 53.4
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.3e-157 560.8 628 50.5
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 2.9e-157 559.7 597 52.6
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 1.6e-155 553.9 507 57.0
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 5.3e-151 538.9 604 49.3
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 3.9e-146 522.7 368 70.1
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 2.0e-145 520.4 461 59.0
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 7.7e-142 508.4 566 51.1
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 4.9e-120 436.0 646 40.9
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 8.9e-114 415.2 544 44.7
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 4.6e-110 402.9 635 38.6
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 1.6e-102 377.9 587 38.0
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 1.9e-100 370.9 585 38.5
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 7.6e-89 332.4 342 50.6
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 4.0e-82 310.1 277 56.0
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.0e-81 307.8 365 46.3
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 2.2e-80 304.3 365 46.8
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 3.3e-68 263.8 265 51.3
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.5e-65 255.0 256 53.1
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 4.9e-64 250.0 470 33.0
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 2.4e-58 231.1 213 56.3
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 1.3e-56 225.3 185 61.6
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 7.9e-54 216.1 327 40.7
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 1.9e-31 141.7 263 35.4
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 5.2e-29 133.7 228 40.4
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 2.8e-27 127.9 171 40.4
unitig_0.g371 Utricularia gibba HOM05D005553 ORTHO05D006866 1.9e-23 115.2 84 71.4
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 1.2e-20 105.9 189 37.0
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 2.4e-18 98.2 249 36.1
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 9.1e-18 96.3 443 23.3
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.7e-16 92.0 348 26.7
TPR.G39542 Trifolium pratense HOM05D005553 ORTHO05D006866 3.8e-16 90.9 47 80.9
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 5.5e-15 87.0 88 56.8
MCO09G019 Micromonas commoda HOM05D005553 ORTHO05D006866 9.8e-12 76.3 149 32.9
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 1.2e-09 69.3 59 54.2


User provided reference genes

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