Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000045g0210 Nicotiana tabacum HOM05D009060 ORTHO05D011398 8.4e-63 243.4 116 100.0
Nitab4.5_0000855g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.3e-52 208.8 124 81.5
Nitab4.5_0000559g0270 Nicotiana tabacum HOM05D009060 ORTHO05D011398 4.6e-45 184.5 113 80.5
Nitab4.5_0002792g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.3e-44 182.2 127 74.0
Nitab4.5_0001334g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 6.7e-44 180.6 116 75.0
Nitab4.5_0002516g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 7.4e-43 177.2 116 72.4
Nitab4.5_0002837g0070 Nicotiana tabacum HOM05D009060 ORTHO05D011398 6.3e-42 174.1 116 71.6
Nitab4.5_0004872g0030 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.0e-39 166.8 116 71.6
Nitab4.5_0006479g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 5.9e-32 141.0 127 59.1
Sopen03g023750 Solanum pennellii HOM05D000030 ORTHO05D000009 2.6e-24 115.5 84 61.9
Sopen03g009380 Solanum pennellii HOM05D000030 ORTHO05D000009 1.3e-23 113.2 84 61.9
Solyc11g150102.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 5.0e-23 111.3 84 60.7
Solyc09g063157.2 Solanum lycopersicum HOM05D000030 ORTHO05D000009 4.7e-21 104.8 84 57.1
Sopen01g026300 Solanum pennellii HOM05D000030 ORTHO05D000009 4.7e-21 104.8 84 57.1
Sopen11g012600 Solanum pennellii HOM05D000030 ORTHO05D000009 4.7e-21 104.8 84 57.1
PGSC0003DMG400042476 Solanum tuberosum HOM05D009060 ORTHO05D011398 9.7e-19 97.1 75 61.3
PGSC0003DMG400016410 Solanum tuberosum HOM05D000030 ORTHO05D000009 6.3e-18 94.4 93 52.7
Sopen10g022460 Solanum pennellii HOM05D000030 ORTHO05D000009 3.1e-17 92.0 93 51.6
Sopen07g007410 Solanum pennellii HOM05D000030 ORTHO05D000009 9.1e-17 90.5 93 51.6
Peaxi162Scf00334g00126 Petunia axillaris HOM05D009060 ORTHO05D011398 3.8e-15 85.1 114 43.0
Nitab4.5_0000133g0040 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.4e-12 76.6 83 51.8
Nitab4.5_0008198g0050 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.8e-12 76.3 74 52.7
Nitab4.5_0004648g0020 Nicotiana tabacum HOM05D009060 ORTHO05D011398 2.3e-12 75.9 32 96.9
Nitab4.5_0022785g0010 Nicotiana tabacum HOM05D009060 ORTHO05D011398 6.8e-12 74.3 31 96.8
Solyc07g049405.1 Solanum lycopersicum HOM05D000030 ORTHO05D000009 2.0e-11 72.8 45 62.2
Sopen12g016160 Solanum pennellii HOM05D000030 ORTHO05D000009 2.0e-11 72.8 46 60.9
Sopen12g008930 Solanum pennellii HOM05D000030 ORTHO05D000009 5.7e-11 71.2 84 45.2
Nitab4.5_0024064g0010 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.7e-10 68.6 31 90.3
Sopen08g019750 Solanum pennellii HOM05D000030 ORTHO05D000009 4.8e-10 68.2 58 51.7
Nitab4.5_0001298g0080 Nicotiana tabacum HOM05D009060 ORTHO05D011398 1.1e-09 67.0 31 90.3
Hma1.2p1_0357F.1_g134210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.4e-09 65.9 70 50.0
Nitab4.5_0005833g0010 Nicotiana tabacum HOM05D003038 ORTHO05D003514 5.4e-09 64.7 29 89.7
Duzib128G1005 Durio zibethinus HOM05D000030 ORTHO05D000009 7.0e-09 64.3 73 43.8
Nitab4.5_0002608g0010 Nicotiana tabacum HOM05D014912 ORTHO05D011398 1.6e-08 63.2 77 48.1
CSS0048534 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 2.0e-08 62.8 77 36.4
Nitab4.5_0003152g0080 Nicotiana tabacum HOM05D014912 ORTHO05D011398 3.5e-08 62.0 83 42.2
CSS0031978 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 4.5e-08 61.6 77 37.7
SGA_v2.0_scaffold258G45755 Striga asiatica HOM05D020517 ORTHO05D011398 4.5e-08 61.6 54 55.6
CSS0049125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 5.9e-08 61.2 77 35.1
Manes.02G168901 Manihot esculenta HOM05D000030 ORTHO05D000009 5.9e-08 61.2 80 36.2
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 5.9e-08 61.2 80 33.8
Manes.02G223166 Manihot esculenta HOM05D000030 ORTHO05D000009 5.9e-08 61.2 80 33.8
Manes.12G071950 Manihot esculenta HOM05D000030 ORTHO05D000009 5.9e-08 61.2 80 33.8
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 5.9e-08 61.2 80 33.8
Manes.13G119650 Manihot esculenta HOM05D000030 ORTHO05D000009 7.7e-08 60.8 80 35.0
Nitab4.5_0000825g0070 Nicotiana tabacum HOM05D011551 ORTHO05D013890 7.7e-08 60.8 83 39.8
Sopen01g017090 Solanum pennellii HOM05D000030 ORTHO05D000009 7.7e-08 60.8 40 62.5
Manes.01G057350 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-07 60.5 72 37.5
Manes.06G026760 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-07 60.5 72 37.5
Manes.13G091744 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-07 60.5 65 40.0
Manes.17G003183 Manihot esculenta HOM05D000030 ORTHO05D000009 1.0e-07 60.5 53 45.3
Nitab4.5_0004608g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 1.0e-07 60.5 80 42.5
Hma1.2p1_1137F.1_g260640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.3e-07 60.1 80 37.5
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 1.3e-07 60.1 47 51.1
CSS0039703 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.3e-07 59.3 76 38.2
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 2.3e-07 59.3 80 33.8
Hma1.2p1_0284F.1_g113810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.9e-07 58.9 80 38.8
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 2.9e-07 58.9 53 45.3
Manes.18G145766 Manihot esculenta HOM05D000030 ORTHO05D000009 2.9e-07 58.9 47 48.9
CSS0017747 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 3.8e-07 58.5 47 48.9
Gorai.013G077200 Gossypium raimondii HOM05D000030 ORTHO05D000009 3.8e-07 58.5 70 40.0
Manes.17G029905 Manihot esculenta HOM05D000030 ORTHO05D000009 3.8e-07 58.5 53 45.3
Manes.03G090444 Manihot esculenta HOM05D000030 ORTHO05D000009 5.0e-07 58.2 70 37.1
Manes.13G077247 Manihot esculenta HOM05D000030 ORTHO05D000009 6.6e-07 57.8 70 37.1
QL02p078120 Quercus lobata HOM05D000030 ORTHO05D000009 6.6e-07 57.8 60 45.0
QL05p039535 Quercus lobata HOM05D000030 ORTHO05D000009 6.6e-07 57.8 60 45.0
QL08p020585 Quercus lobata HOM05D000030 ORTHO05D000009 6.6e-07 57.8 60 45.0
QL08p047975 Quercus lobata HOM05D000030 ORTHO05D000009 6.6e-07 57.8 60 45.0
CSS0004161 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.6e-07 57.4 76 36.8
CSS0008746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.6e-07 57.4 50 48.0
CSS0048206 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 8.6e-07 57.4 46 45.7
Hma1.2p1_1689F.1_g297600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.6e-07 57.4 80 37.5
Manes.02G205650 Manihot esculenta HOM05D000030 ORTHO05D000009 8.6e-07 57.4 72 36.1
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 1.1e-06 57.0 43 41.9
ECA234G3092 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.1e-06 57.0 50 40.0
CSS0038209 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.5e-06 56.6 72 37.5
ECA236G3604 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.5e-06 56.6 64 37.5
Manes.11G097150 Manihot esculenta HOM05D000030 ORTHO05D000031 1.9e-06 56.2 72 36.1
Manes.02G217650 Manihot esculenta HOM05D000030 ORTHO05D000009 2.5e-06 55.8 78 37.2
QL04p087373 Quercus lobata HOM05D000030 ORTHO05D000009 2.5e-06 55.8 57 43.9
QL08p060040 Quercus lobata HOM05D000030 ORTHO05D000009 2.5e-06 55.8 57 43.9
QL09p032347 Quercus lobata HOM05D000030 ORTHO05D000009 2.5e-06 55.8 57 43.9
QL10p060035 Quercus lobata HOM05D000030 ORTHO05D000009 2.5e-06 55.8 57 43.9
Nitab4.5_0000376g0060 Nicotiana tabacum HOM05D009060 ORTHO05D011398 3.3e-06 55.5 29 79.3
QL02p045359 Quercus lobata HOM05D000030 ORTHO05D000009 4.2e-06 55.1 57 43.9
TWI34G1469 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 4.2e-06 55.1 47 44.7
Manes.16G057109 Manihot esculenta HOM05D000030 ORTHO05D000009 5.5e-06 54.7 78 37.2
ECA248G1370 Erigeron canadensis HOM05D007690 ORTHO05D009685 9.5e-06 53.9 50 40.0
Nitab4.5_0004694g0020 Nicotiana tabacum HOM05D011551 ORTHO05D013890 9.5e-06 53.9 77 36.4
QL09p036938 Quercus lobata HOM05D000030 ORTHO05D000009 9.5e-06 53.9 48 47.9
Rhsim06G0136800 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.5e-06 53.9 51 47.1


User provided reference genes

Program Settings