Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 7.4e-141 503.8 249 100.0
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 1.8e-134 482.6 247 96.0
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 1.2e-122 443.4 232 91.4
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 4.2e-120 434.9 248 87.9
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 1.2e-119 433.3 236 89.8
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 6.8e-118 427.6 248 86.3
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 9.8e-109 397.1 246 75.6
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 3.7e-108 395.2 245 76.3
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 6.3e-108 394.4 199 93.0
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 2.0e-106 389.4 245 74.7
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 5.9e-106 387.9 243 76.1
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 7.8e-106 387.5 251 76.5
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 1.5e-104 383.3 246 74.4
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 1.9e-104 382.9 239 77.0
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 1.4e-102 376.7 250 75.6
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 5.2e-102 374.8 247 74.5
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 8.9e-102 374.0 228 76.8
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 8.9e-102 374.0 249 72.7
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 1.5e-101 373.2 247 73.7
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 7.5e-101 370.9 250 72.0
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 9.8e-101 370.5 248 72.2
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 1.3e-100 370.2 236 75.0
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 6.4e-100 367.9 227 78.0
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 8.3e-100 367.5 239 73.2
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 1.1e-99 367.1 218 78.0
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 1.8e-99 366.3 232 75.9
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 1.8e-99 366.3 242 71.1
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 3.2e-99 365.5 246 70.7
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 1.2e-98 363.6 229 73.4
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 1.6e-98 363.2 242 70.2
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.7e-98 362.5 228 74.1
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 5.9e-98 361.3 243 71.6
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 1.0e-97 360.5 220 75.0
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 1.0e-97 360.5 223 74.0
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.3e-97 360.1 240 71.7
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 1.7e-97 359.8 219 74.4
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 1.7e-97 359.8 266 66.9
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 1.7e-97 359.8 251 70.9
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 2.3e-97 359.4 235 73.2
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 2.3e-97 359.4 222 75.2
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 3.0e-97 359.0 214 77.6
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 3.9e-97 358.6 234 70.5
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 3.9e-97 358.6 221 74.2
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 3.9e-97 358.6 221 74.2
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 8.6e-97 357.5 234 70.5
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 1.5e-96 356.7 216 74.1
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 2.5e-96 355.9 226 74.3
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 4.3e-96 355.1 240 71.7
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 5.6e-96 354.8 225 73.8
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 5.6e-96 354.8 240 70.8
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 5.6e-96 354.8 266 66.2
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 7.3e-96 354.4 230 72.2
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 9.5e-96 354.0 237 72.2
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.6e-95 353.2 228 72.4
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.6e-95 353.2 229 71.2
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.6e-95 352.1 243 70.4
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 3.6e-95 352.1 223 72.6
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 4.7e-95 351.7 241 68.5
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 8.0e-95 350.9 245 69.8
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 8.0e-95 350.9 237 70.9
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 8.0e-95 350.9 234 68.8
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 1.4e-94 350.1 235 71.1
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.4e-94 350.1 248 69.4
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 3.1e-94 349.0 245 69.4
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 6.8e-94 347.8 235 71.1
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 6.8e-94 347.8 243 66.7
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 2.6e-93 345.9 239 70.7
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 3.4e-93 345.5 239 70.3
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.4e-93 345.5 210 75.2
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 1.3e-92 343.6 215 74.0
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 1.3e-92 343.6 220 72.7
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 2.2e-92 342.8 216 71.8
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 2.2e-92 342.8 273 61.9
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 4.9e-92 341.7 226 69.5
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 1.1e-91 340.5 255 66.3
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 1.4e-91 340.1 229 69.4
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 1.4e-91 340.1 229 71.2
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 1.9e-91 339.7 225 71.6
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 1.9e-91 339.7 224 70.5
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 2.4e-91 339.3 245 66.1
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 3.2e-91 339.0 212 72.6
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 4.1e-91 338.6 216 71.3
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 4.1e-91 338.6 232 71.6
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 9.2e-91 337.4 239 66.1
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 1.6e-90 336.7 239 66.1
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 4.6e-90 335.1 222 69.8
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 1.0e-89 334.0 219 70.8
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 1.3e-89 333.6 233 70.8
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 2.3e-89 332.8 233 69.1
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 2.3e-89 332.8 257 65.0
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 3.9e-89 332.0 234 66.2
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 5.0e-89 331.6 245 66.9
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 6.6e-89 331.3 233 65.7
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 8.6e-89 330.9 260 64.2
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.5e-88 330.1 295 56.9
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 4.3e-88 328.6 241 65.1
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 9.5e-88 327.4 226 67.3
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 1.6e-87 326.6 239 66.9
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 3.6e-87 325.5 225 68.0
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 1.4e-86 323.6 211 69.7
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 1.4e-86 323.6 211 69.7
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 4.0e-86 322.0 211 69.2
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 5.2e-86 321.6 227 68.7
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 5.2e-86 321.6 388 46.9
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 8.9e-86 320.9 239 63.6
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 9.2e-83 310.8 224 66.5
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 1.1e-80 303.9 226 65.0
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 4.3e-80 302.0 214 66.4
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 5.2e-78 295.0 202 70.3
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.5e-77 293.5 255 62.0
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 9.9e-77 290.8 205 68.3
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.3e-73 280.4 196 67.9
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 4.7e-71 271.9 208 61.1
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 1.1e-70 270.8 186 66.7
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 2.0e-69 266.5 279 54.1
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 4.4e-69 265.4 224 60.3
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.1e-67 260.8 231 58.0
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 1.1e-64 250.8 132 84.8
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 5.6e-64 248.4 203 61.6
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 1.6e-63 246.9 225 58.2
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 4.0e-62 242.3 243 54.7
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 6.9e-62 241.5 232 53.4
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 8.4e-60 234.6 184 65.2
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 2.4e-59 233.0 162 62.3
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 9.3e-59 231.1 155 72.3
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 3.0e-57 226.1 167 62.9
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 3.7e-55 219.2 128 71.9
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.4e-54 217.2 129 76.0
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.2e-50 204.1 128 72.7
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 2.5e-43 179.9 154 55.8
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 7.1e-43 178.3 160 58.1
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 7.9e-42 174.9 124 59.7
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 2.7e-34 149.8 205 38.5
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.8e-33 147.1 99 66.7
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 5.3e-30 135.6 92 67.4
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 8.8e-25 118.2 132 50.0
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 8.8e-17 91.7 99 52.5
FAN14G5434 Fragaria x ananassa HOM05D005134 ORTHO05D006548 9.1e-14 81.6 72 62.5
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 8.8e-09 65.1 32 84.4
ATR0598G211 Amborella trichopoda HOM05D005134 ORTHO05D067863 1.2e-08 64.7 74 50.0
RcHm_v2.0_Chr6g0274061 Rosa chinensis HOM05D005134 ORTHO05D006548 1.2e-08 64.7 59 62.7


User provided reference genes

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