Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000043g0260 Nicotiana tabacum HOM05D000637 ORTHO05D286297 2.7e-45 184.9 88 100.0
Peaxi162Scf00092g01416 Petunia axillaris HOM05D000637 ORTHO05D001881 1.1e-17 93.2 61 72.1
CAN.G907.11 Capsicum annuum HOM05D000637 ORTHO05D001881 1.8e-17 92.4 44 93.2
Nitab4.5_0000043g0250 Nicotiana tabacum HOM05D000637 ORTHO05D001881 5.5e-14 80.9 44 81.8
Peaxi162Scf00092g01415 Petunia axillaris HOM05D000637 ORTHO05D001881 9.4e-14 80.1 44 79.5
Nitab4.5_0008971g0060 Nicotiana tabacum HOM05D000637 ORTHO05D001881 2.7e-13 78.6 44 79.5
Rhsim02G0023200 Rhododendron simsii HOM05D000637 ORTHO05D001881 2.7e-13 78.6 46 73.9
Lj3A738T75 Lonicera japonica HOM05D000637 ORTHO05D001881 1.8e-12 75.9 52 63.5
Nitab4.5_0000559g0080 Nicotiana tabacum HOM05D000637 ORTHO05D001881 3.9e-12 74.7 44 72.7
Solyc03g005160.4 Solanum lycopersicum HOM05D000637 ORTHO05D001881 3.9e-12 74.7 49 63.3
CSS0026868 Camellia sinensis var. sinensis HOM05D000637 ORTHO05D001881 5.1e-12 74.3 59 59.3
Sed0021951 Sechium edule HOM05D000637 ORTHO05D001881 8.8e-12 73.6 46 69.6
EL10Ac3g06429 Beta vulgaris HOM05D000637 ORTHO05D001881 1.1e-11 73.2 46 67.4
Sopen03g001170 Solanum pennellii HOM05D000637 ORTHO05D001881 1.5e-11 72.8 49 61.2
Dinv13988 Davidia involucrata HOM05D000637 ORTHO05D001881 2.0e-11 72.4 62 53.2
Hma1.2p1_0745F.1_g211940 Hydrangea macrophylla HOM05D000637 ORTHO05D001881 2.0e-11 72.4 49 65.3
Cc03_g03650 Coffea canephora HOM05D000637 ORTHO05D001881 4.3e-11 71.2 48 62.5
QL06p002822 Quercus lobata HOM05D000637 ORTHO05D001881 4.3e-11 71.2 44 70.5
CiPaw.02G096800 Carya illinoinensis HOM05D000637 ORTHO05D001881 5.7e-11 70.9 46 69.6
AUR62033611 Chenopodium quinoa HOM05D000637 ORTHO05D001881 5.7e-11 70.9 49 57.1
ClCG06G006180 Citrullus lanatus HOM05D000637 ORTHO05D001881 7.4e-11 70.5 46 65.2
arahy.Tifrunner.gnm1.ann1.16DI2Y Arachis hypogaea HOM05D000637 ORTHO05D001881 9.7e-11 70.1 49 55.1
Prupe.1G012100 Prunus persica HOM05D000637 ORTHO05D001881 9.7e-11 70.1 45 68.9
arahy.Tifrunner.gnm1.ann1.U2IP3E Arachis hypogaea HOM05D000637 ORTHO05D001881 1.3e-10 69.7 49 55.1
PGSC0003DMG400031836 Solanum tuberosum HOM05D000637 ORTHO05D001881 1.3e-10 69.7 48 66.7
Thecc.04G230200 Theobroma cacao HOM05D000637 ORTHO05D001881 1.3e-10 69.7 46 65.2
MELO3C014479.2 Cucumis melo HOM05D000637 ORTHO05D001881 1.7e-10 69.3 46 65.2
CsaV3_6G038140 Cucumis sativus L. HOM05D000637 ORTHO05D001881 1.7e-10 69.3 46 65.2
QL06p002705 Quercus lobata HOM05D000637 ORTHO05D001881 1.7e-10 69.3 44 65.9
QL06p002776 Quercus lobata HOM05D000637 ORTHO05D001881 1.7e-10 69.3 44 65.9
GSVIVG01017958001 Vitis vinifera HOM05D000637 ORTHO05D001881 1.7e-10 69.3 46 65.2
CSS0012639 Camellia sinensis var. sinensis HOM05D000637 ORTHO05D001881 2.2e-10 68.9 47 68.1
RcHm_v2.0_Chr4g0416411 Rosa chinensis HOM05D000637 ORTHO05D001881 2.2e-10 68.9 46 63.0
DCAR_027209 Daucus carota HOM05D000637 ORTHO05D001881 2.8e-10 68.6 74 50.0
CAN.G1965.4 Capsicum annuum HOM05D000637 ORTHO05D001881 3.7e-10 68.2 42 71.4
Duzib151G0085 Durio zibethinus HOM05D000637 ORTHO05D001881 3.7e-10 68.2 46 65.2
MD13G1191800 Malus domestica HOM05D000637 ORTHO05D001881 3.7e-10 68.2 55 58.2
VMungo0720G0646 Vigna mungo HOM05D000637 ORTHO05D001881 4.8e-10 67.8 46 56.5
FvH4_4g15390 Fragaria vesca HOM05D000637 ORTHO05D001881 8.2e-10 67.0 46 63.0
FAN12G1090 Fragaria x ananassa HOM05D000637 ORTHO05D001881 8.2e-10 67.0 46 63.0
Glyma.20G145400 Glycine max HOM05D000637 ORTHO05D001881 8.2e-10 67.0 46 54.3
Phvul.007G056600 Phaseolus vulgaris HOM05D000637 ORTHO05D001881 8.2e-10 67.0 46 56.5
Thhalv10024636m.g Eutrema salsugineum HOM05D000637 ORTHO05D001881 1.1e-09 66.6 46 60.9
Sp7g13090 Schrenkiella parvula HOM05D000637 ORTHO05D001881 1.1e-09 66.6 46 60.9
Ah.13g073830 Amaranthus hybridus HOM05D000637 ORTHO05D001881 1.4e-09 66.2 44 65.9
BraA01t02173Z Brassica rapa HOM05D000637 ORTHO05D001881 1.4e-09 66.2 46 60.9
Gohir.D09G217600 Gossypium hirsutum HOM05D000637 ORTHO05D001881 1.4e-09 66.2 63 47.6
Lj5g0012698 Lotus japonicus HOM05D000637 ORTHO05D001881 1.4e-09 66.2 49 51.0
Potri.010G088900 Populus trichocarpa HOM05D000637 ORTHO05D001881 1.4e-09 66.2 46 65.2
PGSC0003DMG400030082 Solanum tuberosum HOM05D000637 ORTHO05D001881 1.4e-09 66.2 44 72.7
TWI73G1085 Tripterygium wilfordii HOM05D000637 ORTHO05D001881 1.4e-09 66.2 46 63.0
BcaC09g50176 Brassica carinata HOM05D000637 ORTHO05D001881 1.8e-09 65.9 46 60.9
BcaNung00317 Brassica carinata HOM05D000637 ORTHO05D001881 1.8e-09 65.9 46 60.9
A01p22600 Brassica napus HOM05D000637 ORTHO05D001881 1.8e-09 65.9 46 60.9
C01p28110 Brassica napus HOM05D000637 ORTHO05D001881 1.8e-09 65.9 46 60.9
BolC1t02746H Brassica oleracea HOM05D000637 ORTHO05D001881 1.8e-09 65.9 46 60.9
Haze_00911 Corylus avellana HOM05D000637 ORTHO05D001881 1.8e-09 65.9 46 63.0
AT4G14940 Arabidopsis thaliana HOM05D000637 ORTHO05D001881 2.4e-09 65.5 44 63.6
Ciclev10004511m.g Citrus clementina HOM05D000637 ORTHO05D001881 2.4e-09 65.5 44 65.9
COL.COLO4_05312 Corchorus olitorius HOM05D000637 ORTHO05D001881 2.4e-09 65.5 44 63.6
CSS0047236 Camellia sinensis var. sinensis HOM05D000637 ORTHO05D001881 3.1e-09 65.1 47 66.0
Cfa015633 Carpinus fangiana HOM05D000637 ORTHO05D001881 3.1e-09 65.1 44 63.6
Glyma.10G248700 Glycine max HOM05D000637 ORTHO05D001881 3.1e-09 65.1 46 54.3
CSS0032830 Camellia sinensis var. sinensis HOM05D000637 ORTHO05D001881 4.1e-09 64.7 47 66.0
Ca_10911_v3 Cicer arietinum L. HOM05D000637 ORTHO05D001881 4.1e-09 64.7 46 52.2
Solyc09g075930.2 Solanum lycopersicum HOM05D000637 ORTHO05D001881 4.1e-09 64.7 44 70.5
SGA_v2.0_scaffold39G15260 Striga asiatica HOM05D000637 ORTHO05D001881 4.1e-09 64.7 44 65.9
Gorai.006G238300 Gossypium raimondii HOM05D000637 ORTHO05D001881 5.3e-09 64.3 63 47.6
CSS0044749 Camellia sinensis var. sinensis HOM05D000637 ORTHO05D001881 6.9e-09 63.9 47 63.8
FAN22G1103 Fragaria x ananassa HOM05D000637 ORTHO05D001881 6.9e-09 63.9 44 63.6
Medtr1g104550 Medicago truncatula HOM05D000637 ORTHO05D001881 6.9e-09 63.9 46 50.0
Sabra10G0054300 Salix brachista HOM05D000637 ORTHO05D001881 6.9e-09 63.9 46 63.0
Sopen09g030760 Solanum pennellii HOM05D000637 ORTHO05D001881 6.9e-09 63.9 44 68.2
Carub.0007s2717 Capsella rubella HOM05D000637 ORTHO05D001881 9.1e-09 63.5 44 59.1
ECA233G0083 Erigeron canadensis HOM05D000637 ORTHO05D001881 9.1e-09 63.5 44 61.4
Psat6g207960 Pisum sativum HOM05D000637 ORTHO05D001881 1.2e-08 63.2 46 52.2
AL7G40890 Arabidopsis lyrata HOM05D000637 ORTHO05D001881 1.5e-08 62.8 44 61.4
Solyc09g075940.3 Solanum lycopersicum HOM05D000637 ORTHO05D001881 2.6e-08 62.0 44 68.2
Sopen09g030770 Solanum pennellii HOM05D000637 ORTHO05D001881 2.6e-08 62.0 44 68.2
PSO210G7129 Papaver somniferum HOM05D000637 ORTHO05D001881 3.4e-08 61.6 49 57.1
Aa31LG9G2380 Aethionema arabicum HOM05D000637 ORTHO05D001881 5.9e-08 60.8 45 60.0
HanXRQChr11g0336571 Helianthus annuus HOM05D000637 ORTHO05D001881 5.9e-08 60.8 46 54.3
FAN07G0185 Fragaria x ananassa HOM05D000637 ORTHO05D001881 7.7e-08 60.5 46 58.7
PGR004G0816 Punica granatum HOM05D000637 ORTHO05D001881 1.3e-07 59.7 74 39.2
Atru.ctg752_3.98 Acer truncatum HOM05D000637 ORTHO05D001881 1.7e-07 59.3 55 50.9
Lsat_1_v5_gn_7_76621 Lactuca sativa HOM05D000637 ORTHO05D001881 2.2e-07 58.9 46 52.2
Manes.03G179800 Manihot esculenta HOM05D000637 ORTHO05D001881 2.2e-07 58.9 48 50.0
Sc25g0004380 Simmondsia chinensis HOM05D000637 ORTHO05D001881 2.2e-07 58.9 47 57.4
TPR.G5484 Trifolium pratense HOM05D000637 ORTHO05D001881 2.2e-07 58.9 46 50.0
Atru.chr4.2482 Acer truncatum HOM05D000637 ORTHO05D001881 2.9e-07 58.5 55 50.9
MSTRG.4025 Avicennia marina HOM05D000637 ORTHO05D001881 5.5e-06 54.3 42 57.1


User provided reference genes

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