Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-77 292.0 155 100.0
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-50 201.4 197 66.0
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-47 191.4 197 60.9
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-47 191.4 183 61.7
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-45 186.0 151 72.8
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-44 183.7 200 60.5
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-44 183.0 197 60.4
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-44 182.6 169 66.3
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.9e-43 177.2 197 57.9
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-42 176.0 197 59.9
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-41 171.8 175 60.0
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-41 171.8 180 61.7
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-40 170.2 167 64.1
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-40 167.5 184 58.7
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-39 164.1 197 55.8
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-38 163.7 190 54.7
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-38 163.3 181 58.6
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-38 162.9 197 55.3
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-38 161.0 107 85.0
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-38 160.6 182 56.0
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-37 160.2 146 65.8
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-37 160.2 170 60.0
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-37 159.1 138 68.8
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-37 157.9 198 54.0
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-36 155.6 137 67.9
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.0e-36 154.1 182 54.9
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-35 152.5 197 52.8
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-35 151.8 157 62.4
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-34 149.4 191 53.9
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-34 149.1 134 64.9
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-34 148.3 170 57.6
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-33 146.0 197 50.3
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-32 141.4 197 51.3
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-31 140.6 107 77.6
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-31 139.0 106 75.5
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-31 137.5 175 53.7
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-30 136.7 139 59.0
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 3.3e-30 135.6 88 85.2
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-30 134.0 183 50.3
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-29 132.9 137 60.6
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-29 132.1 148 56.1
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-29 131.3 103 73.8
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-29 131.0 123 65.0
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-28 130.6 185 50.8
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-28 129.8 194 47.9
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 4.5e-27 125.2 197 42.1
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-27 124.8 198 45.5
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-26 122.9 183 48.1
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-25 118.6 131 59.5
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-25 118.6 141 56.7
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-25 117.5 80 82.5
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-24 116.3 121 64.5
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-24 116.3 182 48.4
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 3.5e-24 115.5 147 44.9
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-23 111.7 162 50.0
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-22 110.2 147 50.3
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-22 109.4 155 50.3
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-22 107.8 147 49.0
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-22 107.8 107 63.6
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-21 107.1 89 73.0
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-21 106.3 90 68.9
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-21 104.4 71 83.1
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-20 103.2 179 44.7
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-20 101.7 199 39.2
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-18 97.4 170 41.2
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 1.3e-18 97.1 186 38.2
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-18 97.1 200 38.0
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 3.8e-18 95.5 105 55.2
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 3.8e-18 95.5 134 46.3
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 5.0e-18 95.1 200 38.0
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-18 95.1 136 50.0
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-18 94.4 142 48.6
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-17 94.0 169 40.8
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-17 93.2 199 36.7
Nitab4.5_0005978g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-17 92.8 66 81.8
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 3.2e-17 92.4 130 43.8
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 3.2e-17 92.4 102 52.0
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.5e-17 91.7 132 48.5
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 9.3e-17 90.9 105 50.5
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-16 90.5 122 45.9
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-16 90.1 199 37.2
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-16 90.1 194 37.1
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 3.5e-16 89.0 189 34.9
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-15 87.4 186 38.7
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-15 86.3 176 40.9
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-15 85.1 107 52.3
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-15 85.1 140 45.0
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-15 84.3 155 44.5
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 5.7e-14 81.6 119 44.5
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-14 81.6 113 48.7
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-14 80.9 164 39.0
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-14 80.9 206 33.0
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-13 80.5 191 35.6
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-13 79.3 144 45.8
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 4.8e-13 78.6 110 45.5
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.1e-12 77.4 135 41.5
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-12 77.0 122 42.6
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-12 76.3 157 36.9
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-12 75.9 138 38.4
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 9.0e-12 74.3 78 53.8
Solyc07g032130.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.2e-11 73.9 68 63.2
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-11 73.6 177 31.6
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-11 73.6 142 42.3
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-11 73.2 79 50.6
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 3.4e-11 72.4 87 51.7
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 3.4e-11 72.4 87 51.7
Solyc12g038730.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 5.9e-11 71.6 68 58.8
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-10 70.9 171 34.5
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-10 70.9 185 30.8
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-10 70.5 115 45.2
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-10 70.1 185 29.2
Nitab4.5_0000003g0850 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-10 69.7 55 67.3
CAN.G117.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.1e-09 67.4 107 40.2
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-09 67.0 185 34.1
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-09 67.0 114 37.7
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-09 66.6 147 32.0
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.2e-09 65.9 160 31.9
Solyc01g058120.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 4.2e-09 65.5 64 57.8
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 5.5e-09 65.1 205 29.3
Nitab4.5_0004888g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-09 64.7 129 39.5
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-09 64.3 106 48.1
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 2.1e-08 63.2 72 50.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-08 63.2 205 27.8
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.7e-08 62.8 106 36.8
CAN.G1130.7 Capsicum annuum HOM05D000995 ORTHO05D001773 6.1e-08 61.6 71 53.5
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-08 61.6 205 27.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.9e-08 61.2 205 27.3
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.9e-08 61.2 114 36.0
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 1.0e-07 60.8 114 36.0
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.0e-07 60.8 111 35.1
Nitab4.5_0000238g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-07 60.5 76 56.6
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 1.4e-07 60.5 114 36.8
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-07 59.7 86 46.5
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-07 59.7 86 50.0
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-07 59.7 144 32.6
Nitab4.5_0007170g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-07 59.7 32 90.6
Nitab4.5_0001859g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-07 58.9 31 90.3
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-07 58.9 32 87.5
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.9e-07 58.9 105 36.2
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-07 58.5 109 41.3
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 5.1e-07 58.5 205 26.3
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-06 57.4 144 33.3
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-06 56.2 205 25.9
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-06 55.1 94 37.2
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-06 55.1 128 33.6
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.4e-06 54.7 143 32.2


User provided reference genes

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