Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000043g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 5.4e-104 380.9 184 100.0
Nitab4.5_0000043g0070 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.6e-76 289.7 180 81.7
Nitab4.5_0002593g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 6.7e-46 188.0 176 56.2
Sopen09g030970 Solanum pennellii HOM05D008744 ORTHO05D010647 6.9e-43 177.9 106 74.5
Nitab4.5_0000043g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 9.0e-35 151.0 96 79.2
Solyc09g082090.1 Solanum lycopersicum HOM05D008744 ORTHO05D010647 1.2e-26 124.0 74 71.6
Sopen03g027820 Solanum pennellii HOM05D008744 ORTHO05D010647 8.8e-22 107.8 190 32.6
Sopen09g005440 Solanum pennellii HOM05D008744 ORTHO05D010647 2.0e-21 106.7 123 41.5
Sopen09g005480 Solanum pennellii HOM05D008744 ORTHO05D010647 2.0e-21 106.7 123 41.5
PGSC0003DMG400003145 Solanum tuberosum HOM05D008744 ORTHO05D010647 2.0e-21 106.7 190 33.7
Peaxi162Scf01013g00008 Petunia axillaris HOM05D008744 ORTHO05D010647 7.4e-21 104.8 129 38.0
Peaxi162Scf00700g00239 Petunia axillaris HOM05D008744 ORTHO05D010647 1.1e-19 100.9 137 38.7
Peaxi162Scf00700g00238 Petunia axillaris HOM05D008744 ORTHO05D010647 1.4e-19 100.5 177 31.6
Solyc03g097080.4 Solanum lycopersicum HOM05D008744 ORTHO05D010647 2.4e-19 99.8 154 33.8
Nitab4.5_0000559g0160 Nicotiana tabacum HOM05D008744 ORTHO05D010647 5.3e-19 98.6 117 38.5
PGSC0003DMG400012275 Solanum tuberosum HOM05D008744 ORTHO05D010647 2.6e-18 96.3 191 30.4
Nitab4.5_0000078g0430 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.7e-17 93.6 182 34.1
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 2.9e-17 92.8 175 34.9
PGSC0003DMG401029222 Solanum tuberosum HOM05D008744 ORTHO05D010647 2.9e-17 92.8 187 32.1
PGSC0003DMG400007626 Solanum tuberosum HOM05D008744 ORTHO05D010647 5.0e-17 92.0 178 32.6
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 1.6e-15 87.0 176 34.1
Peaxi162Scf00700g00244 Petunia axillaris HOM05D008744 ORTHO05D010647 2.7e-15 86.3 158 32.3
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 3.6e-15 85.9 173 32.4
PGSC0003DMG400013382 Solanum tuberosum HOM05D008744 ORTHO05D010647 4.7e-15 85.5 174 32.8
Nitab4.5_0005672g0020 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.8e-14 83.6 197 30.5
Sopen03g001120 Solanum pennellii HOM05D008744 ORTHO05D010647 1.8e-14 83.6 174 29.9
Peaxi162Scf00270g00516 Petunia axillaris HOM05D008744 ORTHO05D010647 8.8e-14 81.3 180 31.1
Nitab4.5_0014775g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 1.5e-13 80.5 103 34.0
Solyc03g005110.3 Solanum lycopersicum HOM05D008744 ORTHO05D010647 9.7e-13 77.8 178 30.3
Solyc06g069565.2 Solanum lycopersicum HOM05D008744 ORTHO05D010647 1.4e-11 73.9 122 28.7
Sopen06g026860 Solanum pennellii HOM05D008744 ORTHO05D010647 3.1e-11 72.8 159 28.9
Nitab4.5_0004942g0010 Nicotiana tabacum HOM05D008744 ORTHO05D010647 2.0e-10 70.1 91 35.2
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.6e-10 69.7 170 30.0
Sopen06g027470 Solanum pennellii HOM05D008744 ORTHO05D010647 4.5e-10 68.9 179 27.4
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-09 67.0 172 29.1
Sopen04g016220 Solanum pennellii HOM05D008744 ORTHO05D010647 6.5e-09 65.1 91 34.1
Nitab4.5_0000078g0410 Nicotiana tabacum HOM05D008744 ORTHO05D010647 8.5e-09 64.7 82 37.8
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-08 64.3 172 29.7
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.2e-08 62.8 171 29.2
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.2e-08 62.4 171 29.8
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.5e-08 62.0 159 30.2
Nitab4.5_0006819g0040 Nicotiana tabacum HOM05D008744 ORTHO05D010647 9.4e-08 61.2 54 46.3
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-07 60.8 171 27.5
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.2e-07 60.8 171 27.5
Sopen04g016250 Solanum pennellii HOM05D008744 ORTHO05D010647 1.6e-07 60.5 74 35.1
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 6.1e-07 58.5 185 29.7
Nitab4.5_0000613g0220 Nicotiana tabacum HOM05D010354 ORTHO05D012840 6.1e-07 58.5 184 28.3
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 8.0e-07 58.2 186 25.8
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.8e-06 57.0 168 28.0
PGR083G2854 Punica granatum HOM05D008623 ORTHO05D007789 2.3e-06 56.6 113 32.7
PGSC0003DMG400004683 Solanum tuberosum HOM05D008667 ORTHO05D010850 3.0e-06 56.2 150 30.7
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 4.0e-06 55.8 122 27.9
Cc02_g13970 Coffea canephora HOM05D039367 ORTHO05D010647 4.0e-06 55.8 106 31.1
PGSC0003DMG400029323 Solanum tuberosum HOM05D008667 ORTHO05D010850 4.0e-06 55.8 124 32.3
Peaxi162Scf00128g01041 Petunia axillaris HOM05D008667 ORTHO05D010850 6.7e-06 55.1 129 29.5
Peaxi162Scf00191g00112 Petunia axillaris HOM05D008667 ORTHO05D010850 6.7e-06 55.1 105 32.4


User provided reference genes

Program Settings