Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.1e-125 453.4 232 100.0
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.2e-113 413.3 232 93.5
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 3.1e-109 398.7 231 89.2
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 3.8e-107 391.7 231 87.9
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 4.2e-106 388.3 230 86.5
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 3.4e-103 378.6 229 84.7
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.2e-92 343.6 229 78.6
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 4.3e-90 335.1 229 77.7
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 2.8e-89 332.4 241 72.6
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 3.6e-89 332.0 234 78.2
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 6.1e-89 331.3 234 75.2
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 1.0e-88 330.5 233 76.0
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.4e-88 330.1 231 74.5
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 5.2e-88 328.2 229 77.3
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 2.0e-87 326.2 236 72.0
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 2.6e-87 325.9 235 71.9
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 3.4e-87 325.5 232 72.0
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 3.4e-87 325.5 233 75.1
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 7.5e-87 324.3 236 72.5
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.5e-87 324.3 233 73.0
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.5e-87 324.3 233 73.0
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 7.5e-87 324.3 233 73.0
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 1.7e-86 323.2 224 73.7
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.7e-86 323.2 232 71.6
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 2.2e-86 322.8 234 74.4
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 2.2e-86 322.8 233 74.2
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 2.9e-86 322.4 235 71.5
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 2.9e-86 322.4 233 71.2
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 3.7e-86 322.0 234 72.2
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 4.9e-86 321.6 231 71.0
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 4.9e-86 321.6 231 71.0
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 4.9e-86 321.6 235 71.1
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 6.4e-86 321.2 233 72.5
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 8.3e-86 320.9 239 72.8
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 1.1e-85 320.5 235 71.1
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 1.1e-85 320.5 235 70.6
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 2.4e-85 319.3 231 71.0
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 2.4e-85 319.3 231 71.0
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 5.4e-85 318.2 235 74.9
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.6e-84 316.6 235 73.6
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.7e-84 315.8 237 73.0
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 3.5e-84 315.5 233 72.5
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 4.6e-84 315.1 227 73.6
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 4.6e-84 315.1 230 74.3
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 5.9e-84 314.7 234 72.6
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.0e-83 313.9 232 71.1
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 1.3e-83 313.5 229 73.8
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 1.7e-83 313.2 235 72.8
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 2.3e-83 312.8 231 74.0
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 3.0e-83 312.4 238 71.0
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 1.5e-82 310.1 265 64.2
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 2.5e-82 309.3 233 68.2
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 4.3e-82 308.5 231 69.3
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.2e-81 307.0 222 76.1
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 2.1e-81 306.2 228 71.1
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 6.2e-81 304.7 234 71.4
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 5.2e-80 301.6 237 70.9
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 2.0e-79 299.7 230 70.9
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 2.0e-79 299.7 233 70.8
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 4.4e-79 298.5 234 69.2
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 9.8e-79 297.4 235 68.1
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.3e-78 297.0 233 67.4
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.3e-78 297.0 238 69.3
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 2.2e-78 296.2 237 68.4
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 2.9e-78 295.8 228 68.4
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 2.9e-78 295.8 235 67.7
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 8.3e-78 294.3 226 69.9
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 1.4e-77 293.5 203 78.8
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 6.6e-75 284.6 236 66.9
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.1e-74 283.9 206 73.3
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 1.5e-74 283.5 184 77.7
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.8e-73 279.3 227 66.1
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 1.4e-72 276.9 236 66.1
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 1.8e-72 276.6 230 66.1
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 2.3e-72 276.2 230 66.1
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 4.4e-71 271.9 235 65.5
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 4.4e-71 271.9 235 63.0
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.7e-70 270.0 224 67.4
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 3.7e-70 268.9 235 64.3
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 5.4e-69 265.0 235 62.6
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 3.5e-68 262.3 239 59.0
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 1.3e-67 260.4 230 58.7
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 3.0e-67 259.2 244 62.3
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 3.9e-67 258.8 182 68.7
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 2.8e-65 252.7 234 60.3
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 3.1e-64 249.2 225 60.4
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 6.8e-64 248.1 227 58.6
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 1.3e-62 243.8 229 58.1
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 1.7e-62 243.4 230 59.6
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 2.2e-62 243.0 229 59.4
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 4.1e-61 238.8 185 67.0
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 2.7e-60 236.1 185 68.1
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 1.0e-59 234.2 161 70.2
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 3.6e-57 225.7 142 78.9
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 2.0e-55 219.9 141 77.3
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 2.6e-55 219.5 165 70.3
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.7e-51 206.8 140 75.7
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 2.4e-48 196.4 230 50.9
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 3.8e-46 189.1 124 77.4
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 6.4e-46 188.3 139 72.7
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 2.3e-43 179.9 95 87.4
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 9.6e-42 174.5 189 52.4
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.6e-41 173.7 178 49.4
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 3.7e-41 172.6 192 49.0
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 6.4e-38 161.8 229 46.7
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 1.9e-37 160.2 177 45.8
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 1.2e-36 157.5 141 63.8
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.0e-35 154.5 137 62.0
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 6.7e-35 151.8 197 42.6
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 2.2e-30 136.7 160 45.0
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 2.3e-27 126.7 231 41.1
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 2.0e-23 113.6 95 72.6
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 1.9e-18 97.1 91 60.4
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 3.3e-18 96.3 57 80.7
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 1.4e-13 80.9 158 32.3
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 2.3e-11 73.6 161 26.7
Ah.03g133980 Amaranthus hybridus HOM05D007778 ORTHO05D009819 2.2e-09 67.0 235 31.5


User provided reference genes

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