Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 4.4e-37 157.5 84 100.0
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.1e-35 152.9 84 96.4
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.1e-22 109.8 80 75.0
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 2.3e-22 108.6 68 82.4
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 2.2e-20 102.1 72 70.8
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 4.9e-20 100.9 68 73.5
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 3.2e-19 98.2 68 69.1
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 3.2e-19 98.2 68 69.1
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 4.1e-19 97.8 68 70.6
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 1.2e-18 96.3 68 66.2
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 6.0e-18 94.0 68 69.1
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 6.0e-18 94.0 68 63.2
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 7.8e-18 93.6 68 63.2
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 1.7e-17 92.4 68 64.7
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 1.7e-17 92.4 68 61.8
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 3.0e-17 91.7 68 63.2
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 3.0e-17 91.7 68 66.2
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.6e-17 90.5 68 63.2
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.6e-17 90.5 68 63.2
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 6.6e-17 90.5 72 65.3
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 8.6e-17 90.1 67 64.2
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 1.1e-16 89.7 67 61.2
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.1e-16 89.7 68 61.8
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.1e-16 89.7 68 63.2
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 1.5e-16 89.4 68 66.2
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.9e-16 89.0 68 64.7
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.9e-16 89.0 67 59.7
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.5e-16 88.6 68 63.2
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 4.3e-16 87.8 68 60.3
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 5.6e-16 87.4 68 60.3
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 7.3e-16 87.0 64 60.9
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 9.5e-16 86.7 68 57.4
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 1.2e-15 86.3 66 62.1
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.6e-15 85.9 67 58.2
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 2.1e-15 85.5 74 58.1
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 2.1e-15 85.5 65 58.5
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 2.1e-15 85.5 68 58.8
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 2.8e-15 85.1 68 60.3
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 2.8e-15 85.1 66 60.6
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 2.8e-15 85.1 66 60.6
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 2.8e-15 85.1 70 64.3
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 3.6e-15 84.7 67 56.7
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 3.6e-15 84.7 67 56.7
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 4.7e-15 84.3 68 57.4
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 6.2e-15 84.0 65 63.1
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 6.2e-15 84.0 68 54.4
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 6.2e-15 84.0 68 60.3
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 8.1e-15 83.6 68 57.4
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 8.1e-15 83.6 68 61.8
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 1.4e-14 82.8 66 62.1
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 1.4e-14 82.8 67 58.2
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 1.8e-14 82.4 67 61.2
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 1.8e-14 82.4 68 58.8
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 2.4e-14 82.0 72 56.9
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.4e-14 82.0 68 58.8
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 2.4e-14 82.0 68 57.4
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 2.4e-14 82.0 67 61.2
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 5.2e-14 80.9 67 59.7
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 1.5e-13 79.3 67 61.2
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 1.5e-13 79.3 68 54.4
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 2.6e-13 78.6 65 55.4
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 2.6e-13 78.6 68 54.4
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 2.6e-13 78.6 67 59.7
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 2.6e-13 78.6 67 58.2
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 3.4e-13 78.2 67 59.7
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 3.4e-13 78.2 65 60.0
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 4.4e-13 77.8 68 57.4
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 4.4e-13 77.8 67 56.7
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 5.8e-13 77.4 67 58.2
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 5.8e-13 77.4 65 60.0
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 5.8e-13 77.4 65 60.0
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 7.6e-13 77.0 67 56.7
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 7.6e-13 77.0 67 56.7
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 7.6e-13 77.0 67 56.7
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.3e-12 76.3 69 55.1
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 1.7e-12 75.9 70 51.4
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.7e-12 75.9 69 55.1
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.9e-12 75.1 68 51.5
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 4.9e-12 74.3 65 58.5
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 4.9e-12 74.3 65 58.5
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 4.9e-12 74.3 67 49.3
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 6.4e-12 73.9 68 54.4
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 6.4e-12 73.9 68 50.0
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 1.4e-11 72.8 74 47.3
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 4.1e-11 71.2 72 48.6
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.1e-11 71.2 69 52.2
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 5.4e-11 70.9 42 85.7
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 7.1e-11 70.5 65 56.9
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 7.1e-11 70.5 65 56.9
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 1.2e-10 69.7 42 81.0
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 4.6e-10 67.8 44 75.0
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 5.1e-09 64.3 50 48.0
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 8.7e-09 63.5 42 76.2


User provided reference genes

Program Settings