Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000040g0600 Nicotiana tabacum HOM05D004407 ORTHO05D005074 4.2e-46 187.6 89 100.0
Nitab4.5_0005414g0060 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.9e-30 135.6 87 78.2
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 5.9e-16 87.4 124 46.0
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 2.9e-15 85.1 125 44.8
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 8.0e-13 77.0 132 38.6
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.3e-12 75.5 136 40.4
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 5.2e-12 74.3 136 41.2
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 5.2e-12 74.3 132 39.4
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.2e-11 73.2 133 40.6
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.2e-11 73.2 134 41.0
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 1.5e-11 72.8 132 38.6
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 2.0e-11 72.4 132 38.6
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 2.6e-11 72.0 109 44.0
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 5.7e-11 70.9 135 37.8
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 5.7e-11 70.9 132 38.6
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 7.5e-11 70.5 135 34.8
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 7.5e-11 70.5 133 37.6
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 7.5e-11 70.5 122 33.6
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 9.8e-11 70.1 133 39.1
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 9.8e-11 70.1 132 38.6
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 9.8e-11 70.1 134 36.6
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.3e-10 69.7 132 37.9
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 1.3e-10 69.7 116 34.5
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 1.7e-10 69.3 134 38.8
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 1.7e-10 69.3 137 36.5
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 1.7e-10 69.3 129 37.2
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 3.7e-10 68.2 120 39.2
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 8.3e-10 67.0 117 38.5
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 1.4e-09 66.2 121 41.3
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 1.4e-09 66.2 130 38.5
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.4e-09 66.2 131 35.9
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.4e-09 66.2 131 35.9
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 2.4e-09 65.5 136 36.0
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 2.4e-09 65.5 135 40.0
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.1e-09 64.7 133 34.6
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 4.1e-09 64.7 135 36.3
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 5.4e-09 64.3 135 34.8
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 7.0e-09 63.9 121 38.8
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 7.0e-09 63.9 115 33.9
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 7.0e-09 63.9 130 36.9
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 1.2e-08 63.2 134 32.8
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 1.6e-08 62.8 134 33.6
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 1.6e-08 62.8 135 35.6
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 4.5e-08 61.2 117 35.0
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.0e-07 60.1 76 40.8
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 1.7e-07 59.3 117 36.8
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 1.7e-07 59.3 125 38.4
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 2.9e-07 58.5 135 33.3
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 2.9e-07 58.5 124 37.1
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.9e-07 58.2 126 34.9
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 5.0e-07 57.8 119 35.3
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 5.0e-07 57.8 134 35.8
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 5.0e-07 57.8 76 42.1
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 6.6e-07 57.4 135 34.1
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.9e-06 55.8 120 36.7
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 2.5e-06 55.5 121 36.4
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 2.5e-06 55.5 132 34.1
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 3.3e-06 55.1 116 32.8
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 3.3e-06 55.1 122 33.6
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 4.3e-06 54.7 66 47.0


User provided reference genes

Program Settings