Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000040g0530 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.4e-174 616.3 340 100.0
Nitab4.5_0005414g0040 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.5e-96 357.1 367 63.2
PGSC0003DMG400006969 Solanum tuberosum HOM05D001177 ORTHO05D007091 6.7e-84 315.1 396 52.5
Sopen02g017100 Solanum pennellii HOM05D001177 ORTHO05D007091 1.9e-83 313.5 432 50.0
Solyc02g067970.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 2.1e-82 310.1 432 49.5
Nitab4.5_0001863g0200 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.8e-66 256.5 406 49.8
Nitab4.5_0001031g0080 Nicotiana tabacum HOM05D001177 ORTHO05D007091 3.7e-66 256.1 406 47.3
Peaxi162Scf00420g00254 Petunia axillaris HOM05D001177 ORTHO05D007091 2.1e-61 240.4 428 46.7
Solyc02g093760.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 7.4e-59 231.9 376 46.5
PGSC0003DMG400020230 Solanum tuberosum HOM05D001177 ORTHO05D007091 9.7e-59 231.5 382 48.4
Cc08_g11710 Coffea canephora HOM05D001177 ORTHO05D007091 1.8e-57 227.3 369 46.9
Sopen02g038400 Solanum pennellii HOM05D001177 ORTHO05D007091 1.5e-54 217.6 380 45.0
Actinidia36159 Actinidia chinensis HOM05D001177 ORTHO05D007091 5.5e-54 215.7 369 47.2
Lju41A46T90 Lonicera japonica HOM05D001177 ORTHO05D007091 1.2e-48 198.0 372 43.0
Rhsim10G0011600 Rhododendron simsii HOM05D001177 ORTHO05D007091 2.5e-46 190.3 367 42.5
Oeu048591.1 Olea europaea HOM05D001177 ORTHO05D007091 4.7e-45 186.0 333 45.9
Dinv00599 Davidia involucrata HOM05D001177 ORTHO05D007091 8.0e-45 185.3 375 42.9
QL02p073037 Quercus lobata HOM05D001177 ORTHO05D007091 1.8e-44 184.1 391 41.7
QL02p073106 Quercus lobata HOM05D001177 ORTHO05D007091 1.8e-44 184.1 391 41.7
vmacro05919 Vaccinium macrocarpon HOM05D001177 ORTHO05D007091 8.8e-44 181.8 334 44.0
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 2.6e-43 180.3 362 40.3
COL.COLO4_29271 Corchorus olitorius HOM05D001177 ORTHO05D007091 3.7e-42 176.4 370 41.1
SGA_v2.0_scaffold135G34937 Striga asiatica HOM05D001177 ORTHO05D007091 8.3e-42 175.3 369 40.9
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 2.4e-41 173.7 391 40.4
CiPaw.04G032700 Carya illinoinensis HOM05D001177 ORTHO05D007091 5.0e-39 166.0 386 38.9
Migut.H00054 Erythranthe guttata HOM05D001177 ORTHO05D007091 1.5e-38 164.5 373 39.1
RcHm_v2.0_Chr2g0174111 Rosa chinensis HOM05D001177 ORTHO05D007091 5.5e-38 162.5 400 39.0
Thecc.04G027000 Theobroma cacao HOM05D001177 ORTHO05D007091 5.5e-38 162.5 395 38.2
arahy.Tifrunner.gnm1.ann1.Q0SVNI Arachis hypogaea HOM05D001177 ORTHO05D007091 7.2e-38 162.2 377 40.3
CSS0005984 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 9.4e-38 161.8 384 40.1
CSS0031107 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 9.4e-38 161.8 384 40.1
arahy.Tifrunner.gnm1.ann1.R689L2 Arachis hypogaea HOM05D001177 ORTHO05D007091 2.7e-37 160.2 371 40.2
Nn3g16573 Nelumbo nucifera HOM05D001177 ORTHO05D007091 2.7e-37 160.2 370 39.5
Gohir.A11G065300 Gossypium hirsutum HOM05D001177 ORTHO05D007091 8.0e-37 158.7 374 37.2
Haze_14808 Corylus avellana HOM05D001177 ORTHO05D007091 2.3e-36 157.1 477 33.3
Atru.chr6.2479 Acer truncatum HOM05D001177 ORTHO05D007091 4.0e-36 156.4 423 37.6
DCAR_002963 Daucus carota HOM05D001177 ORTHO05D007091 6.8e-36 155.6 348 41.7
Gorai.007G074400 Gossypium raimondii HOM05D001177 ORTHO05D007091 6.8e-36 155.6 374 37.2
Gohir.D11G069600 Gossypium hirsutum HOM05D001177 ORTHO05D007091 4.4e-35 152.9 374 36.6
Sabra16G0217700 Salix brachista HOM05D001177 ORTHO05D007091 4.4e-35 152.9 408 38.5
MD17G1018600 Malus domestica HOM05D001177 ORTHO05D007091 2.8e-34 150.2 390 35.4
Medtr7g035445 Medicago truncatula HOM05D001177 ORTHO05D007091 4.9e-34 149.4 392 38.8
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 1.4e-33 147.9 367 38.4
MD09G1017800 Malus domestica HOM05D001177 ORTHO05D007091 1.8e-33 147.5 381 35.4
PGR083G2095 Punica granatum HOM05D001177 ORTHO05D007091 1.8e-33 147.5 396 37.4
Manes.01G014100 Manihot esculenta HOM05D001177 ORTHO05D007091 2.4e-33 147.1 400 38.2
CsaV3_3G027350 Cucumis sativus L. HOM05D001177 ORTHO05D007091 4.1e-33 146.4 381 36.7
FAN02G2178 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.6e-32 144.4 407 36.6
Dinv33388 Davidia involucrata HOM05D001177 ORTHO05D007091 2.0e-32 144.1 184 49.5
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 2.7e-32 143.7 357 38.7
HanXRQChr09g0255621 Helianthus annuus HOM05D001177 ORTHO05D007091 4.5e-32 142.9 374 38.5
TPR.G9071 Trifolium pratense HOM05D001177 ORTHO05D007091 4.5e-32 142.9 359 38.7
Sed0005287 Sechium edule HOM05D001177 ORTHO05D007091 5.9e-32 142.5 380 36.6
TWI12G0650 Tripterygium wilfordii HOM05D001177 ORTHO05D007091 1.3e-31 141.4 397 36.3
Potri.001G336832 Populus trichocarpa HOM05D001177 ORTHO05D007091 2.9e-31 140.2 410 36.1
ClCG05G013200 Citrullus lanatus HOM05D001177 ORTHO05D007091 3.3e-30 136.7 380 35.5
Peaxi162Scf00080g01722 Petunia axillaris HOM05D001177 ORTHO05D007091 5.6e-30 136.0 367 36.0
Nn4g22453 Nelumbo nucifera HOM05D001177 ORTHO05D007091 7.2e-30 135.6 395 35.9
CANSAT64G1259 Cannabis sativa HOM05D001177 ORTHO05D007091 3.6e-29 133.3 422 34.8
Duzib147G1186 Durio zibethinus HOM05D001177 ORTHO05D007091 3.6e-29 133.3 400 35.0
MELO3C014848.2 Cucumis melo HOM05D001177 ORTHO05D007091 4.7e-29 132.9 357 35.6
ECA232G2553 Erigeron canadensis HOM05D001177 ORTHO05D007091 4.7e-29 132.9 378 36.8
Lj1g0014156 Lotus japonicus HOM05D001177 ORTHO05D007091 8.0e-29 132.1 378 36.0
Lsat_1_v5_gn_4_183800 Lactuca sativa HOM05D001177 ORTHO05D007091 1.0e-28 131.7 384 35.7
Duzib187G1086 Durio zibethinus HOM05D001177 ORTHO05D007091 1.4e-28 131.3 401 35.4
FAN09G0779 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.8e-28 131.0 371 39.1
FAN09G4850 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.8e-28 131.0 371 39.1
Ca_06569_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 4.0e-28 129.8 383 35.0
TAR371G1081 Trochodendron aralioides HOM05D001177 ORTHO05D007091 4.0e-28 129.8 371 36.1
Sed0019906 Sechium edule HOM05D001177 ORTHO05D007091 1.2e-27 128.3 390 34.1
Cpa.g.sc1097.2 Carica papaya HOM05D001177 ORTHO05D007091 2.6e-27 127.1 391 34.5
AUR62024152 Chenopodium quinoa HOM05D001177 ORTHO05D007091 4.9e-26 122.9 332 36.1
Gorai.006G037700 Gossypium raimondii HOM05D001177 ORTHO05D007091 6.4e-26 122.5 367 33.8
PSO017G0460 Papaver somniferum HOM05D001177 ORTHO05D007091 8.3e-26 122.1 387 38.2
EL10Ac6g13445 Beta vulgaris HOM05D001177 ORTHO05D007091 1.1e-25 121.7 335 37.0
Nitab4.5_0001544g0170 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.1e-25 121.7 221 43.0
Ah.02g130620 Amaranthus hybridus HOM05D001177 ORTHO05D007091 1.4e-25 121.3 335 38.5
Psat3g169040 Pisum sativum HOM05D001177 ORTHO05D007091 1.4e-25 121.3 357 34.5
Glyma.19G082000 Glycine max HOM05D001177 ORTHO05D007091 4.1e-25 119.8 377 35.0
Glyma.16G063400 Glycine max HOM05D001177 ORTHO05D007091 7.0e-25 119.0 417 32.9
Lalb_Chr14g0363031 Lupinus albus HOM05D001177 ORTHO05D007091 7.0e-25 119.0 361 33.0
TAR446G0002 Trochodendron aralioides HOM05D001177 ORTHO05D007091 7.0e-25 119.0 367 34.3
Hund24909 Selenicereus undatus HOM05D001177 ORTHO05D007091 9.2e-25 118.6 335 36.1
AUR62005578 Chenopodium quinoa HOM05D001177 ORTHO05D007091 2.0e-24 117.5 325 37.5
Manes.01G049405 Manihot esculenta HOM05D001177 ORTHO05D007091 2.7e-24 117.1 178 46.6
Gohir.A09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 4.6e-24 116.3 368 32.6
ATR0824G077 Amborella trichopoda HOM05D001177 ORTHO05D007091 2.3e-23 114.0 327 33.3
FAN05G3425 Fragaria x ananassa HOM05D001177 ORTHO05D007091 8.6e-23 112.1 415 33.5
Aqoxy5G03563 Aquilegia oxysepala HOM05D001177 ORTHO05D007091 3.3e-22 110.2 427 32.3
CDE07G0753 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 4.3e-22 109.8 320 34.4
Phvul.008G148200 Phaseolus vulgaris HOM05D001177 ORTHO05D007091 4.3e-22 109.8 391 32.7
Sc03g0006890 Simmondsia chinensis HOM05D001177 ORTHO05D007091 5.6e-22 109.4 368 37.0
Sc03g0007010 Simmondsia chinensis HOM05D001177 ORTHO05D007091 5.6e-22 109.4 367 37.1
FAN14G2882 Fragaria x ananassa HOM05D001177 ORTHO05D007091 3.6e-21 106.7 419 33.7
SHI03853 Sapria himalayana HOM05D001177 ORTHO05D007091 8.0e-21 105.5 403 33.0
Manes.S095224 Manihot esculenta HOM05D001177 ORTHO05D007091 1.8e-20 104.4 144 48.6
THA.LOC104805349 Tarenaya hassleriana HOM05D001177 ORTHO05D007091 9.8e-19 98.6 345 33.9
PSO063G4178 Papaver somniferum HOM05D001177 ORTHO05D007091 2.9e-18 97.1 434 31.1
FvH4_6g52470 Fragaria vesca HOM05D001177 ORTHO05D007091 8.3e-18 95.5 409 32.5
Carub.0005s0563 Capsella rubella HOM05D001177 ORTHO05D001507 5.0e-15 86.3 352 29.8
PSO384G2778 Papaver somniferum HOM05D001177 ORTHO05D007091 5.6e-14 82.8 311 31.8
HPP92_004596 Vanilla planifolia HOM05D001177 ORTHO05D007091 7.3e-14 82.4 228 35.1
CARHR148650 Cardamine hirsuta HOM05D001177 ORTHO05D001507 9.5e-14 82.0 176 34.7
Thhalv10003629m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 2.8e-13 80.5 339 29.2
Sp2g16520 Schrenkiella parvula HOM05D001177 ORTHO05D001507 1.1e-12 78.6 374 27.0
AT3G27330 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 1.2e-11 75.1 359 28.1
Zm00001eb331370 Zea mays HOM05D001177 ORTHO05D007091 1.5e-11 74.7 394 27.9
Aa31LG2G5370 Aethionema arabicum HOM05D001177 ORTHO05D001507 1.7e-10 71.2 178 34.3
Nitab4.5_0005587g0090 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.7e-10 71.2 192 35.9
C02p54100 Brassica napus HOM05D001177 ORTHO05D001507 2.9e-10 70.5 183 32.2
Os12g0267900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D007091 3.7e-10 70.1 380 27.4
PSO339G1540 Papaver somniferum HOM05D001177 ORTHO05D007091 3.7e-10 70.1 370 30.0
BolC2t11472H Brassica oleracea HOM05D001177 ORTHO05D001507 6.4e-10 69.3 179 32.4
MBI11_g40895_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D007091 3.2e-09 67.0 284 29.9
Mapoly0006s0009 Marchantia polymorpha HOM05D001177 ORTHO05D007091 2.1e-08 64.3 193 31.6
Nn6g31539 Nelumbo nucifera HOM05D001177 ORTHO05D007091 4.6e-08 63.2 317 29.7
AL5G16650 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 6.0e-08 62.8 367 25.9
A02p35380 Brassica napus HOM05D001177 ORTHO05D007091 1.0e-07 62.0 181 30.9
HPP92_004597 Vanilla planifolia HOM05D001177 ORTHO05D007091 1.0e-07 62.0 80 48.8
BcaC03g14536 Brassica carinata HOM05D001177 ORTHO05D007091 1.3e-07 61.6 44 63.6
C08p08490 Brassica napus HOM05D000546 ORTHO05D000398 3.0e-07 60.5 29 86.2
CDE04G1204 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 3.9e-07 60.1 309 29.4
CBR_g51805 Chara braunii HOM05D001177 ORTHO05D007091 8.6e-07 58.9 39 61.5
C08p35970 Brassica napus HOM05D001177 ORTHO05D007091 1.1e-06 58.5 28 85.7
C09p60530 Brassica napus HOM05D001177 ORTHO05D007091 1.1e-06 58.5 28 85.7
SEGI_15562 Sequoiadendron giganteum HOM05D001177 ORTHO05D007091 1.5e-06 58.2 454 27.5
C07p39030 Brassica napus HOM05D001177 ORTHO05D007091 2.5e-06 57.4 193 31.1
Medtr7g035455 Medicago truncatula HOM05D001177 ORTHO05D007091 3.3e-06 57.0 69 42.0
Gohir.D09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 4.3e-06 56.6 227 31.3


User provided reference genes

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