Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000038g0240 Nicotiana tabacum HOM05D004548 ORTHO05D005402 1.6e-73 279.3 131 100.0
Peaxi162Scf00235g00217 Petunia axillaris HOM05D004548 ORTHO05D005402 1.2e-41 173.3 184 52.7
Peaxi162Scf01242g00029 Petunia axillaris HOM05D004548 ORTHO05D005402 5.4e-34 147.9 184 45.1
Haze_12526 Corylus avellana HOM05D004548 ORTHO05D005402 7.1e-34 147.5 157 49.7
CAN.G874.37 Capsicum annuum HOM05D004548 ORTHO05D005402 6.6e-32 141.0 184 42.4
MSTRG.17963 Avicennia marina HOM05D004548 ORTHO05D005402 8.7e-32 140.6 90 75.6
Nitab4.5_0007144g0020 Nicotiana tabacum HOM05D004548 ORTHO05D005402 1.1e-31 140.2 184 42.4
Nitab4.5_0001348g0030 Nicotiana tabacum HOM05D004548 ORTHO05D005402 1.3e-30 136.7 184 41.3
Oeu058204.1 Olea europaea HOM05D004548 ORTHO05D005402 2.1e-30 136.0 185 43.8
Oeu058206.1 Olea europaea HOM05D004548 ORTHO05D005402 2.8e-30 135.6 185 43.8
SGA_v2.0_scaffold77G25307 Striga asiatica HOM05D004548 ORTHO05D005402 2.8e-30 135.6 90 73.3
Solyc06g082980.3 Solanum lycopersicum HOM05D004548 ORTHO05D005402 1.1e-29 133.7 184 40.2
PGSC0003DMG400027684 Solanum tuberosum HOM05D004548 ORTHO05D005402 1.4e-29 133.3 184 40.2
Sopen06g034370 Solanum pennellii HOM05D004548 ORTHO05D005402 6.9e-29 131.0 184 39.7
Hma1.2p1_0738F.1_g210920 Hydrangea macrophylla HOM05D004548 ORTHO05D005402 3.4e-28 128.6 177 41.8
Lj1A1122T48 Lonicera japonica HOM05D004548 ORTHO05D005402 3.4e-28 128.6 97 61.9
Aqoxy1G02233 Aquilegia oxysepala HOM05D004548 ORTHO05D005402 9.9e-28 127.1 177 41.8
Prupe.1G211800 Prunus persica HOM05D004548 ORTHO05D005402 9.9e-28 127.1 177 42.4
GSVIVG01025270001 Vitis vinifera HOM05D004548 ORTHO05D005402 1.3e-27 126.7 184 40.8
CSS0047568 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 1.7e-27 126.3 183 39.9
Potri.003G160500 Populus trichocarpa HOM05D004548 ORTHO05D005402 1.7e-27 126.3 181 41.4
Cc01_g15960 Coffea canephora HOM05D004548 ORTHO05D005402 2.2e-27 125.9 90 66.7
HanXRQChr04g0124971 Helianthus annuus HOM05D004548 ORTHO05D005402 2.9e-27 125.6 97 56.7
Manes.12G130500 Manihot esculenta HOM05D004548 ORTHO05D005402 2.9e-27 125.6 181 40.9
SalBow3G2027 Salvia bowleyana HOM05D004548 ORTHO05D005402 2.9e-27 125.6 90 70.0
Nn3g16208 Nelumbo nucifera HOM05D004548 ORTHO05D005402 3.8e-27 125.2 90 66.7
unitig_0.g417 Utricularia gibba HOM05D004548 ORTHO05D005402 3.8e-27 125.2 93 64.5
Gorai.006G002800 Gossypium raimondii HOM05D004548 ORTHO05D005402 4.9e-27 124.8 177 41.8
Gohir.A09G002500 Gossypium hirsutum HOM05D004548 ORTHO05D005402 8.4e-27 124.0 177 41.2
Gohir.D09G002300 Gossypium hirsutum HOM05D004548 ORTHO05D005402 1.1e-26 123.6 177 41.8
Lsat_1_v5_gn_5_6480 Lactuca sativa HOM05D004548 ORTHO05D005402 1.1e-26 123.6 178 37.6
Lsat_1_v5_gn_8_83161 Lactuca sativa HOM05D004548 ORTHO05D005402 1.1e-26 123.6 178 37.6
Rhsim12G0068000 Rhododendron simsii HOM05D004548 ORTHO05D005402 1.9e-26 122.9 90 63.3
TAR374G1650 Trochodendron aralioides HOM05D004548 ORTHO05D005402 3.2e-26 122.1 179 41.3
DCAR_019172 Daucus carota HOM05D004548 ORTHO05D005402 4.2e-26 121.7 94 58.5
Duzib187G0077 Durio zibethinus HOM05D004548 ORTHO05D005402 4.2e-26 121.7 177 40.1
Cfa019955 Carpinus fangiana HOM05D004548 ORTHO05D005402 5.5e-26 121.3 177 41.8
Migut.N00675 Erythranthe guttata HOM05D004548 ORTHO05D005402 5.5e-26 121.3 90 68.9
FAN07G0049 Fragaria x ananassa HOM05D004548 ORTHO05D005402 7.1e-26 120.9 90 65.6
CiPaw.06G111100 Carya illinoinensis HOM05D004548 ORTHO05D005402 9.3e-26 120.6 184 41.8
COL.COLO4_06519 Corchorus olitorius HOM05D004548 ORTHO05D005402 9.3e-26 120.6 177 40.7
Potri.001G070301 Populus trichocarpa HOM05D004548 ORTHO05D005402 2.1e-25 119.4 93 60.2
FvH4_4g22210 Fragaria vesca HOM05D004548 ORTHO05D005402 3.5e-25 118.6 90 64.4
Atru.chr12.1469 Acer truncatum HOM05D004548 ORTHO05D005402 4.6e-25 118.2 177 41.2
Actinidia33989 Actinidia chinensis HOM05D004548 ORTHO05D005402 4.6e-25 118.2 90 60.0
MBI07_g42009_MAGBIO Magnolia biondii HOM05D004548 ORTHO05D005402 4.6e-25 118.2 90 61.1
QL03p048368 Quercus lobata HOM05D004548 ORTHO05D005402 6.0e-25 117.9 177 40.1
FAN12G2246 Fragaria x ananassa HOM05D004548 ORTHO05D005402 7.9e-25 117.5 90 63.3
ECA236G1448 Erigeron canadensis HOM05D004548 ORTHO05D005402 1.0e-24 117.1 90 57.8
MD13G1133800 Malus domestica HOM05D004548 ORTHO05D005402 1.0e-24 117.1 90 62.2
Nn4g22076 Nelumbo nucifera HOM05D004548 ORTHO05D005402 1.0e-24 117.1 184 40.2
PSO541G3463 Papaver somniferum HOM05D004548 ORTHO05D005402 3.9e-24 115.2 177 39.0
SEGI_00448 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 3.9e-24 115.2 95 58.9
PSO675G5153 Papaver somniferum HOM05D004548 ORTHO05D005402 6.7e-24 114.4 177 39.0
HPP92_007022 Vanilla planifolia HOM05D004548 ORTHO05D005402 6.7e-24 114.4 90 63.3
Thecc.01G240000 Theobroma cacao HOM05D004548 ORTHO05D005402 8.7e-24 114.0 177 37.9
Lj2g0001774 Lotus japonicus HOM05D004548 ORTHO05D005402 1.1e-23 113.6 90 60.0
ATR0665G198 Amborella trichopoda HOM05D004548 ORTHO05D005402 1.5e-23 113.2 90 58.9
CANSAT80G0994 Cannabis sativa HOM05D004548 ORTHO05D005402 1.5e-23 113.2 177 37.3
TWI18G0021 Tripterygium wilfordii HOM05D004548 ORTHO05D005402 1.5e-23 113.2 181 38.1
Eucgr.J01653 Eucalyptus grandis HOM05D004548 ORTHO05D005402 2.5e-23 112.5 184 37.0
Sc17g0004750 Simmondsia chinensis HOM05D004548 ORTHO05D005402 2.5e-23 112.5 90 58.9
Ciclev10029256m.g Citrus clementina HOM05D004548 ORTHO05D005402 4.3e-23 111.7 177 39.0
Glyma.09G186700 Glycine max HOM05D004548 ORTHO05D005402 5.6e-23 111.3 90 61.1
PGR119G2305 Punica granatum HOM05D004548 ORTHO05D005402 7.4e-23 110.9 90 61.1
HPP92_007039 Vanilla planifolia HOM05D004548 ORTHO05D005402 7.4e-23 110.9 90 61.1
RcHm_v2.0_Chr4g0428441 Rosa chinensis HOM05D004548 ORTHO05D005402 9.6e-23 110.5 177 39.0
ClCG07G012080 Citrullus lanatus HOM05D004548 ORTHO05D005402 1.6e-22 109.8 96 56.2
AL1G32850 Arabidopsis lyrata HOM05D004548 ORTHO05D005402 2.1e-22 109.4 90 60.0
MELO3C017829.2 Cucumis melo HOM05D004548 ORTHO05D005402 2.1e-22 109.4 94 57.4
CsaV3_4G002070 Cucumis sativus L. HOM05D004548 ORTHO05D005402 3.7e-22 108.6 94 57.4
Glyma.09G186900 Glycine max HOM05D004548 ORTHO05D005402 4.8e-22 108.2 177 36.7
PGR119G0727 Punica granatum HOM05D004548 ORTHO05D005402 1.4e-21 106.7 90 56.7
AT1G20050 Arabidopsis thaliana HOM05D004548 ORTHO05D005402 4.0e-21 105.1 90 56.7
Hund23298 Selenicereus undatus HOM05D004548 ORTHO05D005402 4.0e-21 105.1 177 33.9
THA.LOC104807222 Tarenaya hassleriana HOM05D004548 ORTHO05D005402 4.0e-21 105.1 94 57.4
A07p16050 Brassica napus HOM05D004548 ORTHO05D005402 5.3e-21 104.8 94 56.4
BraA07t29333Z Brassica rapa HOM05D004548 ORTHO05D005402 5.3e-21 104.8 94 56.4
Lalb_Chr14g0371281 Lupinus albus HOM05D004548 ORTHO05D005402 5.3e-21 104.8 90 57.8
BcaB03g14416 Brassica carinata HOM05D004548 ORTHO05D005402 9.0e-21 104.0 97 54.6
Carub.0001s1957 Capsella rubella HOM05D004548 ORTHO05D005402 1.2e-20 103.6 94 55.3
BcaB03g14346 Brassica carinata HOM05D004548 ORTHO05D005402 1.5e-20 103.2 94 55.3
Sed0003942 Sechium edule HOM05D004548 ORTHO05D005402 1.5e-20 103.2 84 56.0
TPR.G38962 Trifolium pratense HOM05D004548 ORTHO05D005402 1.5e-20 103.2 90 54.4
CSS0003180 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 2.6e-20 102.4 80 61.2
C07p23420 Brassica napus HOM05D004548 ORTHO05D005402 3.4e-20 102.1 94 55.3
BolC7t42875H Brassica oleracea HOM05D004548 ORTHO05D005402 3.4e-20 102.1 94 55.3
BcaB07g32020 Brassica carinata HOM05D004548 ORTHO05D005402 4.5e-20 101.7 94 53.2
Psat1g039080 Pisum sativum HOM05D004548 ORTHO05D005402 4.5e-20 101.7 90 53.3
CSS0047688 Camellia sinensis var. sinensis HOM05D004548 ORTHO05D005402 5.8e-20 101.3 80 60.0
CARHR020520 Cardamine hirsuta HOM05D004548 ORTHO05D005402 7.6e-20 100.9 94 54.3
Sp1g17810 Schrenkiella parvula HOM05D004548 ORTHO05D005402 7.6e-20 100.9 91 54.9
Thhalv10008732m.g Eutrema salsugineum HOM05D004548 ORTHO05D005402 2.2e-19 99.4 90 55.6
Medtr6g084920 Medicago truncatula HOM05D004548 ORTHO05D005402 2.2e-19 99.4 90 53.3
TPR.G38981 Trifolium pratense HOM05D004548 ORTHO05D005402 2.2e-19 99.4 96 51.0
Aa31LG7G10030 Aethionema arabicum HOM05D004548 ORTHO05D005402 3.8e-19 98.6 90 55.6
BolC5t30565H Brassica oleracea HOM05D004548 ORTHO05D005402 8.4e-19 97.4 94 51.1
Glyma.09G186800 Glycine max HOM05D004548 ORTHO05D005402 8.4e-19 97.4 94 53.2
Psat5g295440 Pisum sativum HOM05D004548 ORTHO05D005402 1.4e-18 96.7 82 56.1
AUR62013297 Chenopodium quinoa HOM05D004548 ORTHO05D005402 1.9e-18 96.3 90 47.8
EL10Ac8g18737 Beta vulgaris HOM05D004548 ORTHO05D005402 2.5e-18 95.9 91 47.3
CDE04G3258 Ceratophyllum demersum HOM05D004548 ORTHO05D005402 2.5e-18 95.9 90 54.4
AUR62011188 Chenopodium quinoa HOM05D004548 ORTHO05D005402 3.2e-18 95.5 90 47.8
FAN17G2493 Fragaria x ananassa HOM05D004548 ORTHO05D005402 5.5e-18 94.7 147 40.1
SGA_v2.0_scaffold95G28703 Striga asiatica HOM05D004548 ORTHO05D005402 7.1e-18 94.4 55 76.4
BcaB03g14342 Brassica carinata HOM05D004548 ORTHO05D005402 1.2e-17 93.6 173 37.0
VMungo0464G1792 Vigna mungo HOM05D004548 ORTHO05D005402 2.1e-17 92.8 90 52.2
BraA06t24724Z Brassica rapa HOM05D004548 ORTHO05D005402 2.7e-17 92.4 99 48.5
Phvul.004G160000 Phaseolus vulgaris HOM05D004548 ORTHO05D005402 4.6e-17 91.7 90 53.3
Pp3c9_19720 Physcomitrium patens HOM05D004548 ORTHO05D005402 7.9e-17 90.9 90 51.1
Zm00001eb334120 Zea mays HOM05D004548 ORTHO05D005402 7.9e-17 90.9 90 50.0
vmacro15975 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 1.0e-16 90.5 82 52.4
AagrBONN_evm.TU.Sc2ySwM_228.5752 Anthoceros agrestis HOM05D004548 ORTHO05D005402 5.1e-16 88.2 90 43.3
Oeu051508.1 Olea europaea HOM05D004548 ORTHO05D005402 5.1e-16 88.2 48 75.0
Hund18283 Selenicereus undatus HOM05D004548 ORTHO05D005402 1.5e-15 86.7 90 44.4
SMO119G0501 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 1.9e-15 86.3 79 53.2
Mapoly0026s0030 Marchantia polymorpha HOM05D004548 ORTHO05D005402 5.7e-15 84.7 90 45.6
BcaB03g14411 Brassica carinata HOM05D004548 ORTHO05D005402 7.4e-15 84.3 163 36.2
EL10Ac8g18743 Beta vulgaris HOM05D004548 ORTHO05D005402 1.3e-14 83.6 97 41.2
EL10Ac8g18745 Beta vulgaris HOM05D004548 ORTHO05D005402 2.8e-14 82.4 97 40.2
Os01g0103600 Oryza sativa ssp. japonica HOM05D004548 ORTHO05D005402 3.7e-14 82.0 91 47.3
Cre12.g557900 Chlamydomonas reinhardtii HOM05D004548 ORTHO05D005402 8.2e-14 80.9 84 45.2
BcaC05g25903 Brassica carinata HOM05D004548 ORTHO05D005402 3.1e-13 79.0 68 52.9
arahy.Tifrunner.gnm1.ann1.L8Q3U6 Arachis hypogaea HOM05D004548 ORTHO05D005402 5.3e-13 78.2 51 60.8
arahy.Tifrunner.gnm1.ann1.Y6E3CC Arachis hypogaea HOM05D004548 ORTHO05D005402 5.3e-13 78.2 50 62.0
Ciclev10029254m.g Citrus clementina HOM05D004548 ORTHO05D005402 9.0e-13 77.4 91 48.4
SMO196G0274 Selaginella moellendorffii HOM05D004548 ORTHO05D005402 1.2e-12 77.0 89 39.3
A06p16180 Brassica napus HOM05D004548 ORTHO05D005402 3.4e-12 75.5 68 51.5
EL10Ac8g18747 Beta vulgaris HOM05D004548 ORTHO05D005402 7.6e-12 74.3 90 40.0
Ciclev10002435m.g Citrus clementina HOM05D004548 ORTHO05D005402 1.3e-11 73.6 91 46.2
Sabra03G0116700 Salix brachista HOM05D004548 ORTHO05D005402 3.8e-11 72.0 138 39.1
Zm00001eb126960 Zea mays HOM05D004548 ORTHO05D005402 3.8e-11 72.0 91 41.8
BcaC05g25905 Brassica carinata HOM05D004548 ORTHO05D005402 1.9e-10 69.7 68 51.5
Ca_25508_v3 Cicer arietinum L. HOM05D004548 ORTHO05D005402 5.5e-10 68.2 57 52.6
Ciclev10006027m.g Citrus clementina HOM05D004548 ORTHO05D005402 5.5e-10 68.2 61 41.0
Glyma.13G078900 Glycine max HOM05D004548 ORTHO05D005402 5.5e-10 68.2 42 61.9
CBR_g55168 Chara braunii HOM05D004548 ORTHO05D005402 7.2e-10 67.8 91 37.4
TPR.G21858 Trifolium pratense HOM05D004548 ORTHO05D005402 2.7e-09 65.9 48 58.3
SEGI_03556 Sequoiadendron giganteum HOM05D004548 ORTHO05D005402 4.6e-09 65.1 36 72.2
vmacro04885 Vaccinium macrocarpon HOM05D004548 ORTHO05D005402 6.7e-08 61.2 135 37.0
BcaC05g25899 Brassica carinata HOM05D004548 ORTHO05D005402 9.7e-07 57.4 100 36.0
C05p18540 Brassica napus HOM05D004548 ORTHO05D005402 2.8e-06 55.8 74 44.6
Mapoly0072s0066 Marchantia polymorpha HOM05D004548 ORTHO05D005402 8.2e-06 54.3 82 36.6


User provided reference genes

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