Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 3.3e-203 711.4 355 100.0
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.2e-131 473.8 317 79.2
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.5e-86 323.9 368 54.9
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 7.0e-68 261.9 380 46.1
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.0e-62 243.8 359 44.3
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 2.6e-62 243.4 365 43.8
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 4.4e-62 242.7 353 43.6
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 5.7e-62 242.3 357 44.3
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 9.8e-62 241.5 396 42.7
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.3e-61 241.1 399 40.6
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.7e-61 239.6 359 43.7
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 4.9e-61 239.2 346 44.2
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 6.3e-61 238.8 350 44.3
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 8.3e-61 238.4 355 44.8
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.1e-60 238.0 359 43.7
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.8e-60 237.3 350 44.0
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 3.2e-60 236.5 385 40.8
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 5.4e-60 235.7 355 44.2
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 1.6e-59 234.2 338 45.9
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 2.7e-59 233.4 345 44.6
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 3.5e-59 233.0 334 47.0
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 4.5e-59 232.6 350 44.0
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 5.9e-59 232.3 346 43.1
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.0e-58 231.5 354 43.5
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.7e-58 230.7 342 44.2
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 1.7e-58 230.7 355 42.8
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.9e-58 229.9 367 42.5
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 5.0e-58 229.2 354 42.9
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 5.0e-58 229.2 362 43.1
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 5.0e-58 229.2 368 42.7
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 6.6e-58 228.8 346 44.5
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 8.6e-58 228.4 377 42.7
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 1.9e-57 227.3 344 43.6
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.3e-57 226.5 359 41.5
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 5.6e-57 225.7 385 41.0
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 5.6e-57 225.7 387 42.1
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 7.3e-57 225.3 360 42.8
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 9.5e-57 224.9 356 43.0
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.6e-56 224.2 376 41.2
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 2.8e-56 223.4 356 43.5
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 2.8e-56 223.4 346 43.6
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.0e-55 221.5 373 41.0
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 3.1e-55 219.9 224 52.7
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 4.0e-55 219.5 333 43.8
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 6.8e-55 218.8 360 41.7
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 3.4e-54 216.5 395 38.0
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.4e-54 216.5 333 42.3
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 4.4e-54 216.1 258 50.4
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 9.8e-54 214.9 362 41.7
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 2.2e-53 213.8 224 52.7
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 3.7e-53 213.0 279 47.7
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 6.4e-53 212.2 351 41.0
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.9e-52 210.7 355 40.0
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 4.1e-52 209.5 229 51.5
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 5.4e-52 209.1 351 41.6
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 7.0e-52 208.8 279 46.2
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 1.2e-51 208.0 357 40.6
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.2e-51 208.0 224 52.2
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 1.2e-51 208.0 349 39.0
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 3.5e-51 206.5 355 40.0
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.7e-50 204.1 264 47.3
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 3.0e-50 203.4 224 50.4
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.1e-49 201.4 224 50.0
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 1.5e-49 201.1 359 39.6
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.5e-49 201.1 361 39.6
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.9e-49 200.7 360 39.2
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 2.5e-49 200.3 378 38.1
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 5.6e-49 199.1 374 38.0
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 5.6e-49 199.1 378 38.1
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 1.2e-48 198.0 386 37.8
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 1.2e-48 198.0 386 37.8
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.6e-48 197.6 262 45.0
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 2.1e-48 197.2 320 40.9
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 2.1e-48 197.2 299 42.1
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 2.1e-48 197.2 337 42.1
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 6.2e-48 195.7 287 42.9
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 6.2e-48 195.7 224 49.1
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 1.1e-47 194.9 288 42.7
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.8e-47 194.1 296 42.2
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.3e-47 193.7 224 48.7
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 2.3e-47 193.7 359 38.4
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 5.2e-47 192.6 347 37.8
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 6.8e-47 192.2 310 41.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 8.9e-47 191.8 329 41.0
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.0e-46 190.7 396 35.1
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 2.2e-45 187.2 109 85.3
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.9e-45 186.0 224 46.4
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 7.8e-43 178.7 334 41.0
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.7e-42 177.6 306 39.5
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.1e-41 174.9 225 44.0
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 2.8e-40 170.2 321 36.8
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 6.8e-39 165.6 285 37.5
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 6.8e-39 165.6 354 34.2
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 7.6e-38 162.2 322 36.6
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 4.1e-36 156.4 109 70.6
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 2.3e-34 150.6 108 68.5
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 9.6e-33 145.2 224 40.6
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 6.8e-31 139.0 336 32.7
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 2.6e-30 137.1 116 60.3
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 4.9e-29 132.9 225 36.4
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.8e-24 117.1 87 66.7
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 4.9e-21 106.3 260 34.2
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 6.4e-21 105.9 87 59.8
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 5.3e-15 86.3 138 38.4
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 7.6e-14 82.4 195 31.8
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 4.9e-13 79.7 262 29.0
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 5.6e-09 66.2 187 28.9
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 4.8e-08 63.2 159 31.4
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.1e-07 60.5 166 31.3
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 4.5e-06 56.6 30 93.3


User provided reference genes

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