Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-95 353.2 173 100.0
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.4e-66 255.8 213 65.3
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.8e-59 231.9 214 61.7
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.1e-48 194.9 160 60.6
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 5.7e-47 191.4 158 58.9
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.7e-46 188.7 160 59.4
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 6.5e-43 177.9 162 57.4
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 6.5e-43 177.9 162 57.4
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 6.5e-43 177.9 162 57.4
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 8.5e-43 177.6 162 58.0
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.7e-41 172.6 212 52.4
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 3.6e-41 172.2 160 52.5
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 6.1e-41 171.4 160 51.9
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 2.3e-40 169.5 158 51.9
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 2.3e-40 169.5 158 51.9
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 5.1e-40 168.3 160 51.2
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 5.3e-37 158.3 134 59.0
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 1.3e-35 153.7 160 51.2
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 1.7e-35 153.3 154 53.9
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 6.5e-35 151.4 180 46.1
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 6.5e-35 151.4 180 46.1
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 8.5e-35 151.0 180 46.1
Nitab4.5_0009770g0040 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.4e-34 147.5 117 70.9
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 1.8e-32 143.3 160 49.4
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 4.8e-30 135.2 160 45.6
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 4.5e-28 128.6 158 45.6
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 1.3e-27 127.1 157 45.9
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-26 124.0 161 46.6
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 3.2e-26 122.5 108 57.4
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 4.7e-25 118.6 158 39.2
Nitab4.5_0000488g0170 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.0e-24 117.5 107 60.7
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 2.3e-24 116.3 158 38.6
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 5.2e-24 115.2 158 37.3
Nitab4.5_0026714g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.6e-23 112.8 97 59.8
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.3e-23 112.5 76 69.7
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.8e-22 109.4 153 41.8
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.8e-21 106.7 173 43.4
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 1.8e-21 106.7 156 39.1
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.6e-20 103.6 157 38.9
Nitab4.5_0000037g0130 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.5e-20 102.4 77 64.9
Solyc02g055537.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.7e-19 100.1 74 60.8
Solyc06g011610.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.5e-19 98.2 73 60.3
CAN.G665.23 Capsicum annuum HOM05D002907 ORTHO05D005554 1.1e-18 97.4 75 66.7
CAN.G181.45 Capsicum annuum HOM05D002907 ORTHO05D005554 4.2e-18 95.5 76 64.5
Nitab4.5_0000745g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.4e-18 94.4 93 54.8
CAN.G509.9 Capsicum annuum HOM05D002907 ORTHO05D005554 2.1e-17 93.2 75 62.7
CAN.G1597.6 Capsicum annuum HOM05D002907 ORTHO05D005554 4.7e-17 92.0 75 62.7
CAN.G1243.6 Capsicum annuum HOM05D002907 ORTHO05D005554 6.1e-17 91.7 75 62.7
PGSC0003DMG400044579 Solanum tuberosum HOM05D002907 ORTHO05D005554 3.0e-16 89.4 75 56.0
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 6.8e-16 88.2 155 31.6
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 6.8e-16 88.2 155 31.6
PGSC0003DMG400039849 Solanum tuberosum HOM05D002907 ORTHO05D005554 6.8e-16 88.2 62 61.3
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 1.2e-15 87.4 155 32.3
CANSAT56G4249 Cannabis sativa HOM05D002907 ORTHO05D005554 1.5e-15 87.0 133 39.8
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 1.5e-15 87.0 178 29.8
Nitab4.5_0009770g0030 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.0e-15 86.7 44 86.4
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 2.0e-15 86.7 155 31.0
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 2.6e-15 86.3 150 29.3
CAN.G1160.4 Capsicum annuum HOM05D002907 ORTHO05D005554 4.4e-15 85.5 74 58.1
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.7e-14 83.6 171 31.0
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 8.3e-14 81.3 132 33.3
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 8.3e-14 81.3 132 33.3
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-13 80.9 61 55.7
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 7.0e-13 78.2 173 35.8
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 5.0e-11 72.0 173 28.9
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 8.5e-11 71.2 159 31.4
Solyc11g044605.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.5e-11 71.2 46 67.4
DCAR_031592 Daucus carota HOM05D002907 ORTHO05D000065 1.1e-10 70.9 154 26.6
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 4.2e-10 68.9 159 31.4
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 4.2e-10 68.9 159 31.4
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.4e-10 67.8 63 54.0
Sopen01g015020 Solanum pennellii HOM05D002907 ORTHO05D005554 1.2e-09 67.4 45 57.8
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.1e-09 66.6 153 26.8
DCAR_025606 Daucus carota HOM05D012849 ORTHO05D000065 2.7e-09 66.2 152 27.0
CAN.G1418.2 Capsicum annuum HOM05D002907 ORTHO05D005554 3.0e-08 62.8 55 60.0
ECA233G2538 Erigeron canadensis HOM05D009063 ORTHO05D011082 5.2e-08 62.0 135 30.4
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 8.8e-08 61.2 43 62.8
DCAR_030300 Daucus carota HOM05D002907 ORTHO05D005554 2.0e-07 60.1 61 44.3
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.0e-07 60.1 176 25.6
DCAR_029864 Daucus carota HOM05D002907 ORTHO05D005554 3.4e-07 59.3 61 42.6
DCAR_015915 Daucus carota HOM05D002907 ORTHO05D005554 4.4e-07 58.9 151 27.2
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.4e-07 58.9 176 26.1
Lsat_1_v5_gn_2_46441 Lactuca sativa HOM05D002730 ORTHO05D011082 4.4e-07 58.9 145 25.5
Thhalv10026854m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.7e-07 58.5 110 30.0
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.5e-07 58.2 161 26.1
ECA233G1973 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.3e-06 57.4 180 25.0


User provided reference genes

Program Settings