Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000035g0290 Nicotiana tabacum HOM05D002059 ORTHO05D285247 4.6e-29 130.6 67 100.0
Nitab4.5_0000800g0070 Nicotiana tabacum HOM05D002059 ORTHO05D002210 9.0e-09 63.2 32 93.8
Nitab4.5_0002996g0020 Nicotiana tabacum HOM05D002059 ORTHO05D002210 4.5e-08 60.8 40 80.0
Nitab4.5_0003547g0030 Nicotiana tabacum HOM05D002059 ORTHO05D002210 1.1e-06 56.2 31 87.1
Rhsim06G0239100 Rhododendron simsii HOM05D000626 ORTHO05D000824 1.4e-06 55.8 36 83.3
unitig_749.g13699 Utricularia gibba HOM05D002059 ORTHO05D002210 1.4e-06 55.8 37 81.1
MSTRG.13063 Avicennia marina HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
CSS0013424 Camellia sinensis var. sinensis HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
CSS0015255 Camellia sinensis var. sinensis HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
DCAR_008693 Daucus carota HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
DCAR_027148 Daucus carota HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Dinv42508 Davidia involucrata HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
ECA233G2189 Erigeron canadensis HOM05D002059 ORTHO05D002210 1.9e-06 55.5 36 80.6
ECA238G3368 Erigeron canadensis HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Migut.M01555 Erythranthe guttata HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
HanXRQChr05g0147531 Helianthus annuus HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
HanXRQChr08g0218021 Helianthus annuus HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
HanXRQChr08g0218071 Helianthus annuus HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
HanXRQChr10g0302451 Helianthus annuus HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
HanXRQChr15g0491531 Helianthus annuus HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Hma1.2p1_0334F.1_g128740 Hydrangea macrophylla HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Lsat_1_v5_gn_0_10961 Lactuca sativa HOM05D000797 ORTHO05D007935 1.9e-06 55.5 31 90.3
Lsat_1_v5_gn_2_102901 Lactuca sativa HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
MBI16_g43762_MAGBIO Magnolia biondii HOM05D002059 ORTHO05D002210 1.9e-06 55.5 39 76.9
Nitab4.5_0000302g0030 Nicotiana tabacum HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Nitab4.5_0002598g0020 Nicotiana tabacum HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Nitab4.5_0011467g0020 Nicotiana tabacum HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
PSO541G1870 Papaver somniferum HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
PSO675G4010 Papaver somniferum HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Solyc06g073300.1 Solanum lycopersicum HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Sopen06g029660 Solanum pennellii HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
PGSC0003DMG400026911 Solanum tuberosum HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
TAR626G0269 Trochodendron aralioides HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
TAR626G0691 Trochodendron aralioides HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
vmacro11666 Vaccinium macrocarpon HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
GSVIVG01020410001 Vitis vinifera HOM05D002059 ORTHO05D002210 1.9e-06 55.5 31 90.3
Actinidia12792 Actinidia chinensis HOM05D002059 ORTHO05D002210 2.5e-06 55.1 31 87.1
ECA232G3288 Erigeron canadensis HOM05D002059 ORTHO05D002210 2.5e-06 55.1 31 87.1
Lsat_1_v5_gn_8_22940 Lactuca sativa HOM05D002059 ORTHO05D002210 2.5e-06 55.1 31 87.1
QL11p054648 Quercus lobata HOM05D002059 ORTHO05D002210 2.5e-06 55.1 47 63.8
Rhsim06G0151500 Rhododendron simsii HOM05D002059 ORTHO05D002210 2.5e-06 55.1 36 80.6
TAR628G1398 Trochodendron aralioides HOM05D002059 ORTHO05D001416 2.5e-06 55.1 31 87.1
Aqoxy2G03053 Aquilegia oxysepala HOM05D002059 ORTHO05D002210 3.2e-06 54.7 31 83.9
CSS0005226 Camellia sinensis var. sinensis HOM05D002059 ORTHO05D002210 3.2e-06 54.7 36 80.6
CSS0014206 Camellia sinensis var. sinensis HOM05D002059 ORTHO05D002210 3.2e-06 54.7 36 80.6
SalBow8G1433 Salvia bowleyana HOM05D002059 ORTHO05D002210 3.2e-06 54.7 37 75.7
GSVIVG01012080001 Vitis vinifera HOM05D002059 ORTHO05D002210 3.2e-06 54.7 31 87.1
Aqoxy1G01479 Aquilegia oxysepala HOM05D002059 ORTHO05D002210 4.2e-06 54.3 30 90.0
Oeu034309.1 Olea europaea HOM05D002059 ORTHO05D002210 4.2e-06 54.3 36 77.8
PSO017G5400 Papaver somniferum HOM05D002059 ORTHO05D002210 4.2e-06 54.3 31 87.1
PSO478G1459 Papaver somniferum HOM05D002059 ORTHO05D002210 4.2e-06 54.3 31 87.1
CDE05G0241 Ceratophyllum demersum HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 83.9
CDE11G0301 Ceratophyllum demersum HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 83.9
Dinv04790 Davidia involucrata HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 87.1
Migut.H01693 Erythranthe guttata HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 83.9
Nitab4.5_0008969g0030 Nicotiana tabacum HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 87.1
Oeu001943.1 Olea europaea HOM05D002059 ORTHO05D002210 5.5e-06 53.9 36 75.0
Peaxi162Scf00126g00001 Petunia axillaris HOM05D002059 ORTHO05D002210 5.5e-06 53.9 30 86.7
Peaxi162Scf00126g00002 Petunia axillaris HOM05D002059 ORTHO05D002210 5.5e-06 53.9 30 86.7
Rhsim05G0190100 Rhododendron simsii HOM05D002059 ORTHO05D002210 5.5e-06 53.9 30 86.7
SalBow3G1838 Salvia bowleyana HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 87.1
SalBow3G4555 Salvia bowleyana HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 87.1
Sc20g0002880 Simmondsia chinensis HOM05D002059 ORTHO05D002210 5.5e-06 53.9 36 77.8
SGA_v2.0_scaffold186G40216 Striga asiatica HOM05D002059 ORTHO05D002210 5.5e-06 53.9 31 83.9
MSTRG.14540 Avicennia marina HOM05D002059 ORTHO05D002210 7.1e-06 53.5 37 75.7
Cfa007206 Carpinus fangiana HOM05D002059 ORTHO05D002210 7.1e-06 53.5 36 75.0
Cc05_g00070 Coffea canephora HOM05D002059 ORTHO05D002210 7.1e-06 53.5 31 83.9
Migut.N00432 Erythranthe guttata HOM05D002059 ORTHO05D002210 7.1e-06 53.5 31 83.9
MD17G1128200 Malus domestica HOM05D002059 ORTHO05D002210 7.1e-06 53.5 39 71.8
SGA_v2.0_scaffold7G03585 Striga asiatica HOM05D002059 ORTHO05D002210 7.1e-06 53.5 37 73.0
TAR595G0001 Trochodendron aralioides HOM05D002059 ORTHO05D002210 7.1e-06 53.5 31 83.9
TAR624G1200 Trochodendron aralioides HOM05D002059 ORTHO05D002210 7.1e-06 53.5 31 83.9
MSTRG.16110 Avicennia marina HOM05D002059 ORTHO05D002210 9.3e-06 53.1 31 83.9
CAN.G65.173 Capsicum annuum HOM05D002059 ORTHO05D002210 9.3e-06 53.1 31 87.1
ClCG07G010880 Citrullus lanatus HOM05D002059 ORTHO05D002210 9.3e-06 53.1 39 74.4
MELO3C016199.2 Cucumis melo HOM05D002059 ORTHO05D002210 9.3e-06 53.1 39 74.4
MELO3C026403.2 Cucumis melo HOM05D002059 ORTHO05D002210 9.3e-06 53.1 31 87.1
CsaV3_4G032310 Cucumis sativus L. HOM05D002059 ORTHO05D002210 9.3e-06 53.1 31 87.1
Sed0003190 Sechium edule HOM05D002059 ORTHO05D002210 9.3e-06 53.1 31 87.1


User provided reference genes

Program Settings