Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.2e-121 439.9 218 100.0
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 1.4e-21 107.5 61 90.2
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 1.4e-21 107.5 61 90.2
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 8.8e-21 104.8 60 90.0
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 8.8e-21 104.8 60 90.0
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 2.6e-20 103.2 61 88.5
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 2.6e-20 103.2 61 88.5
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 4.4e-20 102.4 61 86.9
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 5.7e-20 102.1 60 88.3
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 7.4e-20 101.7 60 88.3
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 1.7e-19 100.5 61 85.2
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.8e-19 99.8 51 98.0
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.1e-18 95.9 60 85.0
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 7.0e-18 95.1 51 92.2
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 3.5e-17 92.8 61 77.0
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.2e-15 86.3 53 84.9
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 7.2e-15 85.1 59 72.9
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 7.2e-15 85.1 59 72.9
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 9.4e-15 84.7 51 82.4
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 1.6e-14 84.0 59 72.9
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 1.6e-14 84.0 59 72.9
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 3.6e-14 82.8 59 71.2
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.4e-13 80.9 62 72.6
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 1.4e-13 80.9 59 71.2
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 4.0e-13 79.3 54 74.1
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 3.3e-12 76.3 53 73.6
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 2.2e-11 73.6 60 65.0
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 2.2e-11 73.6 60 65.0
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 2.2e-11 73.6 60 65.0
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 1.1e-10 71.2 61 63.9
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 1.1e-10 71.2 61 63.9
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 1.4e-10 70.9 60 65.0
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 1.4e-10 70.9 60 65.0
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 1.8e-10 70.5 53 69.8
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 2.4e-10 70.1 49 73.5
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 2.4e-10 70.1 60 63.3
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 2.4e-10 70.1 54 66.7
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 3.1e-10 69.7 53 67.9
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 4.1e-10 69.3 53 67.9
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 4.1e-10 69.3 53 67.9
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 4.1e-10 69.3 53 67.9
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 9.1e-10 68.2 49 71.4
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 9.1e-10 68.2 49 71.4
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 9.1e-10 68.2 49 71.4
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 9.1e-10 68.2 49 71.4
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 9.1e-10 68.2 49 71.4
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 9.1e-10 68.2 49 71.4
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 9.1e-10 68.2 59 62.7
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 2.7e-09 66.6 60 61.7
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 2.7e-09 66.6 60 61.7
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 2.7e-09 66.6 81 48.1
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 4.5e-09 65.9 59 62.7
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 4.5e-09 65.9 53 66.0
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 4.5e-09 65.9 53 66.0
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 7.7e-09 65.1 60 60.0
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 2.2e-08 63.5 53 64.2
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 2.2e-08 63.5 53 64.2
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 2.2e-08 63.5 53 64.2
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 2.9e-08 63.2 60 58.3
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 3.8e-08 62.8 60 58.3
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 3.8e-08 62.8 60 58.3
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 1.2e-06 57.8 55 58.2
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 2.1e-06 57.0 64 53.1
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-06 57.0 48 60.4


User provided reference genes

Program Settings