Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 6.6e-140 500.7 262 100.0
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 8.7e-124 447.2 255 92.5
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 7.6e-112 407.5 256 83.6
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 8.4e-111 404.1 255 83.9
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 1.3e-108 396.7 255 83.1
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 1.9e-102 376.3 246 78.9
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 3.6e-77 292.4 239 64.0
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 1.0e-76 290.8 240 63.8
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 1.8e-76 290.0 240 62.9
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 2.2e-74 283.1 260 61.5
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 3.7e-74 282.3 256 58.2
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 1.8e-73 280.0 254 63.0
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 5.3e-73 278.5 259 59.5
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 2.6e-72 276.2 256 58.2
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 3.5e-72 275.8 260 60.8
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 3.5e-72 275.8 252 60.3
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 3.5e-72 275.8 259 58.7
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 4.5e-72 275.4 239 60.7
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 5.9e-72 275.0 242 62.8
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 7.7e-72 274.6 243 59.7
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 1.3e-71 273.9 240 58.8
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 3.8e-71 272.3 253 62.5
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 1.1e-70 270.8 262 58.8
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 1.5e-70 270.4 246 60.6
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 2.5e-70 269.6 250 60.4
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 2.5e-70 269.6 256 57.0
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 7.2e-70 268.1 246 63.0
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 7.2e-70 268.1 250 60.8
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 3.6e-69 265.8 256 56.6
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 4.7e-69 265.4 240 60.0
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 4.7e-69 265.4 238 59.7
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 8.0e-69 264.6 251 56.2
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 1.0e-68 264.2 235 57.4
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 1.4e-68 263.8 243 59.3
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 1.4e-68 263.8 237 58.6
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 2.3e-68 263.1 240 59.2
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 5.2e-68 261.9 253 56.5
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 5.2e-68 261.9 259 57.5
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 6.8e-68 261.5 259 55.2
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 6.8e-68 261.5 215 63.3
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 1.2e-67 260.8 256 54.3
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 3.4e-67 259.2 240 57.1
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 5.7e-67 258.5 240 58.8
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 9.7e-67 257.7 224 62.1
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 1.7e-66 256.9 260 55.8
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 3.7e-66 255.8 254 55.5
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 4.1e-65 252.3 237 57.8
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 7.7e-64 248.1 242 55.8
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 1.3e-63 247.3 259 54.8
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 2.2e-63 246.5 241 57.3
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 3.8e-63 245.7 256 55.5
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 8.5e-63 244.6 219 59.4
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 1.5e-62 243.8 241 55.2
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 2.5e-62 243.0 259 54.1
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 3.2e-62 242.7 238 56.3
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 4.2e-62 242.3 236 56.8
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 7.2e-62 241.5 236 56.4
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 9.4e-62 241.1 251 54.2
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 1.2e-61 240.7 233 56.7
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 1.2e-61 240.7 241 55.2
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 1.6e-61 240.4 259 52.1
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 2.7e-61 239.6 241 55.6
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 2.7e-61 239.6 251 54.6
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 2.7e-61 239.6 253 54.5
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 3.6e-61 239.2 251 53.4
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 1.0e-60 237.7 236 55.9
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 1.0e-60 237.7 222 62.6
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 3.0e-60 236.1 236 56.4
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 5.2e-60 235.3 236 55.9
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 6.8e-60 235.0 237 55.3
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 6.8e-60 235.0 252 54.4
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 1.2e-59 234.2 237 53.6
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 2.6e-59 233.0 240 55.0
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 2.6e-59 233.0 240 55.0
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 4.4e-59 232.3 261 52.5
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 2.8e-58 229.6 214 60.7
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 1.4e-57 227.3 259 53.3
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 4.1e-57 225.7 233 54.9
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 7.0e-57 224.9 235 54.0
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 1.2e-56 224.2 238 57.6
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 7.7e-56 221.5 203 60.1
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 1.3e-55 220.7 238 55.5
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 3.8e-55 219.2 222 55.0
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 4.2e-54 215.7 249 49.4
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 5.5e-54 215.3 185 62.7
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 7.2e-54 214.9 248 51.6
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 1.6e-53 213.8 194 58.8
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 1.5e-51 207.2 201 54.7
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 1.5e-51 207.2 232 50.4
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 1.7e-50 203.8 222 54.1
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 2.8e-50 203.0 196 54.6
Hund27153 Selenicereus undatus HOM05D007091 ORTHO05D008768 2.0e-48 196.8 238 47.5
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 1.3e-47 194.1 173 59.5
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 1.3e-47 194.1 201 52.2
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 3.3e-46 189.5 217 47.0
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 8.9e-44 181.4 175 57.1
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 1.2e-43 181.0 172 55.2
Sed0004344 Sechium edule HOM05D007091 ORTHO05D008768 1.5e-43 180.6 191 53.9
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 2.0e-43 180.3 248 45.2
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 7.5e-43 178.3 175 56.6
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 4.9e-42 175.6 176 58.0
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 4.9e-42 175.6 173 59.0
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 7.8e-40 168.3 255 39.2
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 1.5e-38 164.1 134 64.9
BcaC03g18194 Brassica carinata HOM05D007091 ORTHO05D008768 1.3e-26 124.4 122 56.6
MCO05G578 Micromonas commoda HOM05D007091 ORTHO05D008768 1.7e-26 124.0 245 35.5
unitig_21.g20331 Utricularia gibba HOM05D007091 ORTHO05D008768 9.2e-25 118.2 108 61.1
TWI81G1026 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 1.5e-22 110.9 137 52.6
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 2.1e-21 107.1 375 26.9
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 3.2e-17 93.2 73 65.8
BolC2t12316H Brassica oleracea HOM05D007091 ORTHO05D008768 5.4e-17 92.4 94 54.3
MCO07G264 Micromonas commoda HOM05D007091 ORTHO05D008768 9.6e-14 81.6 143 35.0
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 1.3e-13 81.3 89 52.8
C09p32190 Brassica napus HOM05D004766 ORTHO05D008768 3.1e-12 76.6 112 43.8
BolC1t04291H Brassica oleracea HOM05D004766 ORTHO05D008768 3.1e-12 76.6 80 51.2
A06p41130 Brassica napus HOM05D000061 ORTHO05D000050 9.9e-11 71.6 86 47.7
BraA06t27036Z Brassica rapa HOM05D000061 ORTHO05D000050 9.9e-11 71.6 86 47.7
Cre10.g431450 Chlamydomonas reinhardtii HOM05D007091 ORTHO05D008768 6.4e-10 68.9 212 29.7
BcaC04g23924 Brassica carinata HOM05D004766 ORTHO05D039973 5.4e-09 65.9 77 44.2


User provided reference genes

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