Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 5.7e-236 820.5 393 100.0
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 5.5e-215 750.7 378 96.0
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 4.5e-209 731.1 378 92.6
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 1.1e-207 726.5 378 92.3
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 1.1e-207 726.5 378 92.3
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 9.8e-196 686.8 383 87.5
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 7.6e-148 527.7 388 69.6
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 1.3e-144 516.9 380 66.8
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 3.9e-144 515.4 276 89.1
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 1.5e-140 503.4 373 66.8
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 4.5e-140 501.9 380 65.3
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 5.4e-138 495.0 379 66.0
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 6.0e-137 491.5 381 64.8
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 3.9e-136 488.8 379 62.3
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 9.6e-135 484.2 380 63.9
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 4.8e-134 481.9 373 63.8
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 1.8e-133 479.9 374 63.4
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 4.0e-133 478.8 375 65.1
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 6.9e-133 478.0 379 63.3
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 2.0e-132 476.5 385 60.0
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 2.2e-131 473.0 389 60.4
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 3.8e-131 472.2 373 63.0
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 2.4e-130 469.5 380 60.5
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 4.2e-130 468.8 393 59.0
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 4.2e-130 468.8 384 60.9
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 5.5e-130 468.4 379 60.4
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 7.1e-130 468.0 384 60.9
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 7.1e-130 468.0 384 60.9
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 2.7e-129 466.1 379 60.7
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 6.0e-129 464.9 382 62.0
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 1.0e-128 464.2 386 60.9
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 1.0e-128 464.2 380 60.5
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 1.0e-128 464.2 382 58.6
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.0e-128 464.2 389 59.9
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 1.3e-128 463.8 381 60.6
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 1.3e-128 463.8 379 62.3
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 1.8e-128 463.4 377 60.5
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 2.3e-128 463.0 385 61.3
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 3.9e-128 462.2 380 61.1
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 6.7e-128 461.5 376 58.0
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 8.7e-128 461.1 386 60.4
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 1.9e-127 459.9 380 59.7
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 1.9e-127 459.9 385 61.0
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 2.5e-127 459.5 388 59.3
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 2.5e-127 459.5 389 59.9
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 3.3e-127 459.1 392 58.9
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 4.3e-127 458.8 379 57.3
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 5.6e-127 458.4 384 60.4
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 7.4e-127 458.0 394 59.9
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 9.6e-127 457.6 383 60.6
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 2.1e-126 456.4 382 60.7
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 3.7e-126 455.7 392 58.4
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 1.1e-125 454.1 385 59.7
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 4.0e-125 452.2 380 60.0
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 9.0e-125 451.1 389 59.4
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 2.6e-124 449.5 380 60.0
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 3.4e-124 449.1 384 61.5
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 3.4e-124 449.1 380 58.4
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 3.4e-124 449.1 382 57.9
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 3.4e-124 449.1 381 59.6
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 5.8e-124 448.4 382 59.9
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 5.8e-124 448.4 380 59.7
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 7.6e-124 448.0 381 59.6
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 7.6e-124 448.0 390 59.5
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 1.0e-123 447.6 380 59.7
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 1.0e-123 447.6 380 59.7
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 1.0e-123 447.6 398 57.0
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 3.8e-123 445.7 394 57.4
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 2.5e-122 443.0 380 60.5
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 3.2e-122 442.6 380 59.2
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 5.5e-122 441.8 393 57.3
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 7.1e-122 441.4 374 59.9
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 9.3e-122 441.0 384 58.6
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 4.6e-121 438.7 386 59.8
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 3.0e-120 436.0 408 54.7
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 8.7e-120 434.5 389 57.6
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 2.8e-118 429.5 387 55.6
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 1.8e-117 426.8 392 55.6
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 3.1e-117 426.0 365 58.9
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 1.5e-116 423.7 383 55.6
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 2.9e-115 419.5 389 57.1
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 2.9e-115 419.5 389 57.1
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 3.8e-115 419.1 383 54.8
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 3.9e-112 409.1 385 53.8
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 1.1e-111 407.5 376 54.8
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 4.3e-111 405.6 300 65.0
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 7.4e-111 404.8 339 61.1
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 4.8e-110 402.1 299 64.5
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 2.2e-107 393.3 379 54.9
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 1.3e-102 377.5 318 60.7
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 9.4e-98 361.3 376 49.7
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 6.1e-97 358.6 400 49.5
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 1.1e-95 354.4 243 71.2
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 8.2e-94 348.2 403 46.9
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 1.6e-89 334.0 397 47.1
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 5.7e-87 325.5 394 45.9
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 1.3e-83 314.3 351 49.3
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 6.8e-80 302.0 378 45.2
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 8.8e-80 301.6 199 70.9
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 7.7e-76 288.5 313 49.8
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 1.2e-73 281.2 208 64.4
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 4.7e-73 279.3 390 42.1
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 8.8e-72 275.0 270 52.6
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 3.7e-70 269.6 193 65.3
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 1.4e-56 224.6 156 66.0
SGA_v2.0_scaffold48G17978 Striga asiatica HOM05D006114 ORTHO05D007609 7.3e-50 202.2 144 65.3
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 5.2e-48 196.1 185 54.1
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 3.4e-47 193.4 381 33.1
unitig_26.g9903 Utricularia gibba HOM05D006114 ORTHO05D007609 2.2e-38 164.1 101 72.3
FAN14G0378 Fragaria x ananassa HOM05D006114 ORTHO05D007609 7.3e-34 149.1 141 54.6
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 6.9e-32 142.5 222 38.7
AUR62039241 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.7e-30 137.9 218 39.4
AUR62009795 Chenopodium quinoa HOM05D006114 ORTHO05D007609 8.4e-30 135.6 222 37.4
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 7.8e-28 129.0 144 47.2
CDE08G0205 Ceratophyllum demersum HOM05D006114 ORTHO05D007609 3.3e-26 123.6 90 63.3
FvH4_3g14282 Fragaria vesca HOM05D006114 ORTHO05D007609 2.0e-23 114.4 108 53.7
Zm00001eb268560 Zea mays HOM05D006114 ORTHO05D007609 3.5e-20 103.6 104 51.0
Zm00001eb346130 Zea mays HOM05D003599 ORTHO05D004221 3.5e-20 103.6 95 54.7
Zm00001eb243390 Zea mays HOM05D006114 ORTHO05D007609 3.0e-19 100.5 92 54.3
Zm00001eb268570 Zea mays HOM05D006114 ORTHO05D007609 3.0e-19 100.5 79 60.8
Zm00001eb080980 Zea mays HOM05D006114 ORTHO05D007609 2.1e-17 94.4 103 46.6
VMungo1383G2819 Vigna mungo HOM05D006114 ORTHO05D007609 6.2e-17 92.8 77 55.8
Hma1.2p1_0448F.1_g154860 Hydrangea macrophylla HOM05D004302 ORTHO05D004939 8.1e-17 92.4 378 25.9
ECA238G3553 Erigeron canadensis HOM05D004302 ORTHO05D004939 1.4e-16 91.7 370 24.6
Zm00001eb080990 Zea mays HOM05D006114 ORTHO05D007609 1.2e-15 88.6 74 55.4
Nn3g17571 Nelumbo nucifera HOM05D004302 ORTHO05D004939 7.6e-15 85.9 370 24.9
Aa31LG11G13870 Aethionema arabicum HOM05D004302 ORTHO05D004939 6.4e-14 82.8 370 25.1
Sabra17G0088200 Salix brachista HOM05D004302 ORTHO05D004939 8.4e-14 82.4 371 25.6
MSTRG.25314 Avicennia marina HOM05D006114 ORTHO05D007609 1.4e-13 81.6 77 54.5
arahy.Tifrunner.gnm1.ann1.0BPN3L Arachis hypogaea HOM05D000034 ORTHO05D000037 4.6e-12 76.6 58 56.9
SGA_v2.0_scaffold17G07917 Striga asiatica HOM05D006114 ORTHO05D007609 1.8e-11 74.7 179 38.5
FvH4_6g34681 Fragaria vesca HOM05D006114 ORTHO05D007609 1.1e-10 72.0 77 48.1
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 2.4e-08 64.3 333 26.1
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 5.3e-08 63.2 328 24.4
FvH4_6g34680 Fragaria vesca HOM05D006114 ORTHO05D007609 9.0e-08 62.4 50 64.0
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 2.0e-07 61.2 380 22.1
Mapoly0186s0014 Marchantia polymorpha HOM05D004302 ORTHO05D004939 2.6e-07 60.8 349 23.5
TAR381G0769 Trochodendron aralioides HOM05D003005 ORTHO05D004939 3.4e-07 60.5 374 22.5
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 1.0e-06 58.9 160 30.0
Cc10_g05770 Coffea canephora HOM05D007423 ORTHO05D009091 1.3e-06 58.5 325 25.5
Pp3c26_600 Physcomitrium patens HOM05D003005 ORTHO05D006906 1.7e-06 58.2 210 29.0
Pp3c14_23730 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.9e-06 57.4 400 21.5
RcHm_v2.0_Chr2g0119661 Rosa chinensis HOM05D006114 ORTHO05D007609 2.9e-06 57.4 37 64.9
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 8.4e-06 55.8 372 23.1


User provided reference genes

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