Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000032g0180 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.9e-60 235.7 125 100.0
Nitab4.5_0001059g0010 Nicotiana tabacum HOM05D004308 ORTHO05D005139 2.7e-43 178.7 119 83.2
PGSC0003DMG400032139 Solanum tuberosum HOM05D004308 ORTHO05D005139 2.8e-40 168.7 119 78.2
Solyc01g006000.3 Solanum lycopersicum HOM05D004308 ORTHO05D005139 5.4e-39 164.5 119 75.6
Sopen01g002010 Solanum pennellii HOM05D004308 ORTHO05D005139 7.0e-39 164.1 119 75.6
CAN.G158.6 Capsicum annuum HOM05D004308 ORTHO05D005139 2.0e-38 162.5 118 75.4
Peaxi162Scf00100g00724 Petunia axillaris HOM05D004308 ORTHO05D005139 1.5e-36 156.4 146 64.4
Dinv13431 Davidia involucrata HOM05D004308 ORTHO05D005139 1.3e-32 143.3 119 69.7
SalBow5G0018 Salvia bowleyana HOM05D004308 ORTHO05D005139 4.1e-31 138.3 124 61.3
Hma1.2p1_0972F.1_g242796 Hydrangea macrophylla HOM05D004308 ORTHO05D005139 5.4e-31 137.9 120 65.0
GSVIVG01025407001 Vitis vinifera HOM05D004308 ORTHO05D005139 1.2e-30 136.7 119 65.5
Manes.17G081200 Manihot esculenta HOM05D004308 ORTHO05D005139 3.5e-30 135.2 119 64.7
RcHm_v2.0_Chr5g0081551 Rosa chinensis HOM05D004308 ORTHO05D005139 4.5e-30 134.8 119 64.7
FvH4_3g44841 Fragaria vesca HOM05D004308 ORTHO05D005139 5.9e-30 134.4 119 63.9
FAN11G1034 Fragaria x ananassa HOM05D004308 ORTHO05D005139 5.9e-30 134.4 119 63.9
FAN25G2014 Fragaria x ananassa HOM05D004308 ORTHO05D005139 5.9e-30 134.4 119 63.9
FAN21G1794 Fragaria x ananassa HOM05D004308 ORTHO05D005139 7.8e-30 134.0 119 63.9
HanXRQChr07g0196751 Helianthus annuus HOM05D004308 ORTHO05D005139 1.7e-29 132.9 119 63.0
Haze_22983 Corylus avellana HOM05D004308 ORTHO05D005139 3.8e-29 131.7 119 62.2
ECA238G0198 Erigeron canadensis HOM05D004308 ORTHO05D005139 6.6e-29 131.0 124 61.3
Prupe.6G010000 Prunus persica HOM05D004308 ORTHO05D005139 8.6e-29 130.6 119 60.5
Migut.I00336 Erythranthe guttata HOM05D004308 ORTHO05D005139 1.9e-28 129.4 119 61.3
LjContig00141g0028139 Lotus japonicus HOM05D004308 ORTHO05D005139 1.9e-28 129.4 123 61.8
Hund21645 Selenicereus undatus HOM05D004308 ORTHO05D005139 1.9e-28 129.4 119 60.5
Lj3g0012221 Lotus japonicus HOM05D004308 ORTHO05D005139 2.5e-28 129.0 123 61.8
MD03G1008000 Malus domestica HOM05D004308 ORTHO05D005139 2.5e-28 129.0 119 59.7
Gohir.A10G002400 Gossypium hirsutum HOM05D004308 ORTHO05D005139 3.3e-28 128.6 126 58.7
CANSAT78G0795 Cannabis sativa HOM05D004308 ORTHO05D005139 4.3e-28 128.3 124 58.1
MD14G1141900 Malus domestica HOM05D004308 ORTHO05D005139 4.3e-28 128.3 119 58.8
AL1G23050 Arabidopsis lyrata HOM05D004308 ORTHO05D005139 5.6e-28 127.9 124 58.1
CsaV3_1G042220 Cucumis sativus L. HOM05D004308 ORTHO05D005139 1.2e-27 126.7 119 58.8
THA.LOC104811063 Tarenaya hassleriana HOM05D004308 ORTHO05D005139 1.2e-27 126.7 120 59.2
MD12G1151800 Malus domestica HOM05D004308 ORTHO05D005139 1.6e-27 126.3 119 58.0
Nitab4.5_0022753g0010 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.6e-27 126.3 73 90.4
TAR369G0492 Trochodendron aralioides HOM05D004308 ORTHO05D005139 1.6e-27 126.3 119 63.0
Ah.06g193030 Amaranthus hybridus HOM05D004308 ORTHO05D005139 2.1e-27 125.9 120 60.8
Aqoxy7G00472 Aquilegia oxysepala HOM05D004308 ORTHO05D005139 2.1e-27 125.9 119 60.5
ClCG01G010120 Citrullus lanatus HOM05D004308 ORTHO05D005139 2.1e-27 125.9 119 58.8
MELO3C015647.2 Cucumis melo HOM05D004308 ORTHO05D005139 2.1e-27 125.9 119 58.0
Gohir.D10G002400 Gossypium hirsutum HOM05D004308 ORTHO05D005139 2.1e-27 125.9 126 57.9
QL01p008001 Quercus lobata HOM05D004308 ORTHO05D005139 2.1e-27 125.9 119 60.5
SGA_v2.0_scaffold28G11761 Striga asiatica HOM05D004308 ORTHO05D005139 2.1e-27 125.9 119 59.7
Cpa.g.sc1833.2 Carica papaya HOM05D004308 ORTHO05D005139 2.8e-27 125.6 119 60.5
Gorai.011G002800 Gossypium raimondii HOM05D004308 ORTHO05D005139 2.8e-27 125.6 126 57.9
Cc00_g18210 Coffea canephora HOM05D004308 ORTHO05D005139 3.6e-27 125.2 119 61.3
DCAR_001990 Daucus carota HOM05D004308 ORTHO05D005139 3.6e-27 125.2 126 58.7
Rhsim13G0230300 Rhododendron simsii HOM05D004308 ORTHO05D005139 3.6e-27 125.2 119 63.9
Duzib177G0548 Durio zibethinus HOM05D004308 ORTHO05D005139 4.7e-27 124.8 119 58.8
Duzib177G1053 Durio zibethinus HOM05D004308 ORTHO05D005139 4.7e-27 124.8 119 58.8
C08p15000 Brassica napus HOM05D004308 ORTHO05D005139 6.1e-27 124.4 119 58.0
BolC8t49130H Brassica oleracea HOM05D004308 ORTHO05D005139 6.1e-27 124.4 119 58.0
Thhalv10007452m.g Eutrema salsugineum HOM05D004308 ORTHO05D005139 6.1e-27 124.4 118 58.5
Thecc.09G212800 Theobroma cacao HOM05D004308 ORTHO05D005139 8.0e-27 124.0 119 57.1
Carub.0001s1154 Capsella rubella HOM05D004308 ORTHO05D005139 1.0e-26 123.6 119 57.1
CiPaw.13G173300 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.0e-26 123.6 119 59.7
CiPaw.13G173400 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.0e-26 123.6 119 59.7
ClCG08G005760 Citrullus lanatus HOM05D004308 ORTHO05D005139 1.0e-26 123.6 119 58.8
PSO782G3227 Papaver somniferum HOM05D004308 ORTHO05D005139 1.4e-26 123.2 119 58.8
TWI32G0511 Tripterygium wilfordii HOM05D004308 ORTHO05D005139 1.4e-26 123.2 119 58.8
Actinidia06853 Actinidia chinensis HOM05D004308 ORTHO05D005139 1.8e-26 122.9 119 62.2
Aa31LG1G2850 Aethionema arabicum HOM05D004308 ORTHO05D005139 1.8e-26 122.9 119 58.0
Lsat_1_v5_gn_3_32861 Lactuca sativa HOM05D004308 ORTHO05D005139 1.8e-26 122.9 119 59.7
MBI13_g29631_MAGBIO Magnolia biondii HOM05D004308 ORTHO05D005139 1.8e-26 122.9 119 57.1
BcaB03g13224 Brassica carinata HOM05D004308 ORTHO05D005139 2.3e-26 122.5 119 57.1
Potri.003G216900 Populus trichocarpa HOM05D004308 ORTHO05D005139 2.3e-26 122.5 119 58.0
Sp1g10500 Schrenkiella parvula HOM05D004308 ORTHO05D005139 2.3e-26 122.5 119 57.1
A09p64290 Brassica napus HOM05D004308 ORTHO05D005139 3.0e-26 122.1 119 55.5
BraA09t41772Z Brassica rapa HOM05D004308 ORTHO05D005139 3.0e-26 122.1 119 55.5
vmacro11846 Vaccinium macrocarpon HOM05D004308 ORTHO05D005139 3.0e-26 122.1 120 62.5
CARHR012200 Cardamine hirsuta HOM05D004308 ORTHO05D005139 4.0e-26 121.7 120 55.8
Nn4g26332 Nelumbo nucifera HOM05D004308 ORTHO05D005139 4.0e-26 121.7 119 58.0
Sed0009913 Sechium edule HOM05D004308 ORTHO05D005139 4.0e-26 121.7 119 58.8
EL10Ac4g10352 Beta vulgaris HOM05D004308 ORTHO05D005139 6.8e-26 120.9 120 57.5
A08p33180 Brassica napus HOM05D004308 ORTHO05D005139 6.8e-26 120.9 119 56.3
C08p47900 Brassica napus HOM05D004308 ORTHO05D005139 6.8e-26 120.9 119 56.3
BolC8t52327H Brassica oleracea HOM05D004308 ORTHO05D005139 6.8e-26 120.9 119 56.3
BraA08t35236Z Brassica rapa HOM05D004308 ORTHO05D005139 6.8e-26 120.9 119 56.3
MD03G1008200 Malus domestica HOM05D004308 ORTHO05D005139 6.8e-26 120.9 126 55.6
unitig_749.g14167 Utricularia gibba HOM05D004308 ORTHO05D005139 6.8e-26 120.9 119 59.7
CiPaw.13G173800 Carya illinoinensis HOM05D004308 ORTHO05D005139 8.9e-26 120.6 119 58.0
COL.COLO4_34992 Corchorus olitorius HOM05D004308 ORTHO05D005139 8.9e-26 120.6 119 58.8
PSO063G3498 Papaver somniferum HOM05D004308 ORTHO05D005139 1.5e-25 119.8 119 57.1
Eucgr.F02225 Eucalyptus grandis HOM05D004308 ORTHO05D005139 2.0e-25 119.4 119 55.5
Ciclev10015009m.g Citrus clementina HOM05D004308 ORTHO05D005139 5.8e-25 117.9 120 55.0
TAR623G1609 Trochodendron aralioides HOM05D004308 ORTHO05D005139 7.5e-25 117.5 119 58.8
Zm00001eb162820 Zea mays HOM05D004308 ORTHO05D005139 1.7e-24 116.3 119 53.8
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 2.9e-24 115.5 118 58.5
ATR0598G220 Amborella trichopoda HOM05D004308 ORTHO05D005139 3.7e-24 115.2 119 56.3
arahy.Tifrunner.gnm1.ann1.SIQ1MV Arachis hypogaea HOM05D004308 ORTHO05D005139 4.9e-24 114.8 123 54.5
arahy.Tifrunner.gnm1.ann1.6VJH5B Arachis hypogaea HOM05D004308 ORTHO05D005139 6.4e-24 114.4 123 54.5
Zm00001eb118570 Zea mays HOM05D004308 ORTHO05D005139 1.1e-23 113.6 120 52.5
Atru.chr1.4126 Acer truncatum HOM05D004308 ORTHO05D005139 1.4e-23 113.2 119 54.6
AUR62000023 Chenopodium quinoa HOM05D004308 ORTHO05D005139 1.4e-23 113.2 120 57.5
Lalb_Chr05g0219691 Lupinus albus HOM05D004308 ORTHO05D005139 1.9e-23 112.8 123 52.8
CSS0019756 Camellia sinensis var. sinensis HOM05D004308 ORTHO05D005139 4.1e-23 111.7 119 60.5
CiPaw.04G144200 Carya illinoinensis HOM05D004308 ORTHO05D005139 9.2e-23 110.5 119 55.5
Os12g0498700 Oryza sativa ssp. japonica HOM05D004308 ORTHO05D005139 9.2e-23 110.5 120 51.7
Medtr4g084070 Medicago truncatula HOM05D004308 ORTHO05D005139 1.2e-22 110.2 123 52.0
Glyma.07G221600 Glycine max HOM05D004308 ORTHO05D005139 1.6e-22 109.8 119 51.3
Psat7g130280 Pisum sativum HOM05D004308 ORTHO05D005139 2.0e-22 109.4 115 53.0
HPP92_026953 Vanilla planifolia HOM05D004308 ORTHO05D005139 6.6e-21 104.4 118 52.5
DCAR_001389 Daucus carota HOM05D004308 ORTHO05D005139 8.6e-21 104.0 108 57.4
TPR.G20984 Trifolium pratense HOM05D004308 ORTHO05D005139 1.5e-20 103.2 120 49.2
SEGI_23646 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 5.6e-20 101.3 119 48.7
Lj9C99G0 Lonicera japonica HOM05D004308 ORTHO05D005139 3.6e-19 98.6 67 76.1
VMungo0251G2308 Vigna mungo HOM05D004308 ORTHO05D005139 1.8e-18 96.3 126 46.0
Ca_18762_v3 Cicer arietinum L. HOM05D004308 ORTHO05D005139 2.3e-18 95.9 69 68.1
Phvul.009G191800 Phaseolus vulgaris HOM05D004308 ORTHO05D005139 8.9e-18 94.0 103 50.5
CiPaw.13G173700 Carya illinoinensis HOM05D004308 ORTHO05D005139 1.5e-17 93.2 106 53.8
Phvul.002G098000 Phaseolus vulgaris HOM05D004308 ORTHO05D005139 2.0e-17 92.8 126 45.2
Lsat_1_v5_gn_9_99701 Lactuca sativa HOM05D004308 ORTHO05D005139 6.0e-14 81.3 68 64.7
Hma1.2p1_0972F.1_g242793 Hydrangea macrophylla HOM05D004308 ORTHO05D005139 7.8e-14 80.9 120 43.3
Sc09g0000260 Simmondsia chinensis HOM05D004308 ORTHO05D005139 1.3e-13 80.1 90 52.2
AT1G11880 Arabidopsis thaliana HOM05D004308 ORTHO05D005139 2.3e-13 79.3 83 51.8
Lj9A102G3 Lonicera japonica HOM05D004308 ORTHO05D005139 3.9e-13 78.6 110 48.2
Mapoly0040s0060 Marchantia polymorpha HOM05D004308 ORTHO05D005139 1.5e-12 76.6 124 39.5
Nitab4.5_0000775g0120 Nicotiana tabacum HOM05D004308 ORTHO05D005139 1.5e-12 76.6 41 95.1
SMO203G0184 Selaginella moellendorffii HOM05D004308 ORTHO05D005139 5.6e-12 74.7 114 38.6
MD11G1011600 Malus domestica HOM05D004308 ORTHO05D005139 1.1e-10 70.5 116 37.9
Pp3c10_8190 Physcomitrium patens HOM05D004308 ORTHO05D005139 2.3e-10 69.3 119 37.0
SEGI_38936 Sequoiadendron giganteum HOM05D004308 ORTHO05D005139 5.2e-10 68.2 67 52.2
Lsat_1_v5_gn_3_8900 Lactuca sativa HOM05D004308 ORTHO05D005139 1.2e-09 67.0 60 60.0
AUR62019194 Chenopodium quinoa HOM05D004308 ORTHO05D005139 1.5e-09 66.6 120 40.0
Lju1680A2G13 Lonicera japonica HOM05D004308 ORTHO05D005139 1.5e-09 66.6 49 69.4
Sabra03G0162000 Salix brachista HOM05D004308 ORTHO05D005139 1.7e-08 63.2 119 37.8
Atru.chr10.219 Acer truncatum HOM05D004308 ORTHO05D005139 8.3e-08 60.8 104 44.2
Lju963A2G3 Lonicera japonica HOM05D004308 ORTHO05D005139 1.6e-06 56.6 50 60.0


User provided reference genes

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