Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000031g0300 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.6e-74 281.2 145 100.0
Nitab4.5_0001158g0070 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.9e-24 116.3 89 68.5
Nitab4.5_0001569g0210 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.5e-20 101.3 121 44.6
Nitab4.5_0000540g0160 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.5e-18 95.5 69 65.2
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.3e-17 93.6 57 73.7
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.9e-17 92.0 58 72.4
Nitab4.5_0005859g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.9e-17 92.0 95 51.6
Nitab4.5_0027927g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.1e-17 91.7 58 69.0
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.3e-16 89.0 117 47.9
Nitab4.5_0001660g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.4e-16 87.8 120 43.3
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.6e-15 86.7 60 61.7
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-15 85.5 136 41.9
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-14 82.4 55 72.7
Nitab4.5_0001027g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.1e-14 82.0 127 37.0
Nitab4.5_0003605g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.9e-14 81.3 51 70.6
Nitab4.5_0000539g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.0e-14 80.9 55 69.1
Nitab4.5_0002590g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.0e-14 80.9 112 43.8
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-13 80.1 133 39.1
Nitab4.5_0003601g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.5e-13 80.1 103 44.7
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-13 80.1 58 65.5
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-13 78.2 58 63.8
Nitab4.5_0007582g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.2e-12 76.3 54 66.7
Nitab4.5_0000712g0070 Nicotiana tabacum HOM05D026524 ORTHO05D000006 8.5e-12 74.3 75 52.0
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.5e-12 74.3 61 50.8
Nitab4.5_0002697g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.4e-11 73.6 75 52.0
Nitab4.5_0011177g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.9e-11 73.2 49 61.2
Nitab4.5_0007582g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-11 72.8 59 61.0
Nitab4.5_0003810g0070 Nicotiana tabacum HOM05D011002 ORTHO05D022887 3.2e-11 72.4 54 59.3
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.2e-11 72.0 132 34.8
Nitab4.5_0028335g0010 Nicotiana tabacum HOM05D045504 ORTHO05D000006 5.5e-11 71.6 114 38.6
Nitab4.5_0002223g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-11 71.2 134 35.1
Nitab4.5_0000082g0230 Nicotiana tabacum HOM05D011002 ORTHO05D000006 9.4e-11 70.9 52 57.7
Nitab4.5_0000244g0250 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.6e-10 70.1 46 69.6
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-10 70.1 131 35.1
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-10 69.7 49 57.1
Nitab4.5_0000396g0200 Nicotiana tabacum HOM05D011951 ORTHO05D000006 2.1e-10 69.7 146 35.6
Nitab4.5_0004763g0010 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.7e-10 69.3 70 47.1
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 3.6e-10 68.9 54 53.7
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.6e-10 68.9 123 39.0
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-10 68.2 58 53.4
Nitab4.5_0000457g0450 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.9e-10 67.8 58 53.4
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-09 67.4 126 37.3
Nitab4.5_0000832g0100 Nicotiana tabacum HOM05D026524 ORTHO05D000006 1.8e-09 66.6 135 37.0
Nitab4.5_0004728g0120 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.0e-09 65.9 51 52.9
Nitab4.5_0000491g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.1e-09 65.1 50 62.0
Nitab4.5_0002108g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.1e-09 65.1 63 49.2
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-09 64.7 63 49.2
Nitab4.5_0000527g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.3e-08 62.0 49 55.1
Nitab4.5_0001987g0040 Nicotiana tabacum HOM05D011002 ORTHO05D000006 4.3e-08 62.0 70 52.9
Nitab4.5_0005065g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.3e-08 62.0 43 62.8
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.7e-08 61.6 58 46.6
SHI48005 Sapria himalayana HOM05D000024 ORTHO05D000006 5.7e-08 61.6 59 44.1
Nitab4.5_0000013g0590 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.4e-08 61.2 103 34.0
Nitab4.5_0000715g0130 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.4e-08 61.2 40 70.0
Nitab4.5_0002114g0100 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.7e-08 60.8 68 44.1
SHI35807 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-08 60.8 59 40.7
SHI33731 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-07 60.5 59 44.1
SHI34714 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-07 60.5 59 40.7
SHI48200 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-07 60.5 60 41.7
Nitab4.5_0000370g0070 Nicotiana tabacum HOM05D012219 ORTHO05D000006 1.7e-07 60.1 74 48.6
SHI34493 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-07 60.1 60 43.3
Nitab4.5_0000149g0110 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.2e-07 59.7 47 59.6
Nitab4.5_0007963g0090 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.2e-07 59.7 59 52.5
SHI28657 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-07 59.3 60 40.0
Nitab4.5_0003397g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.7e-07 58.9 57 45.6
Nitab4.5_0004384g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 3.7e-07 58.9 39 59.0
SHI14849 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-07 58.9 60 40.0
SHI20394 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-07 58.9 59 42.4
SHI21937 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-07 58.9 60 40.0
SHI22798 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-07 58.9 58 41.4
SHI36499 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-07 58.9 60 40.0
SHI49286 Sapria himalayana HOM05D000024 ORTHO05D000007 3.7e-07 58.9 59 37.3
Nitab4.5_0000914g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.8e-07 58.5 59 47.5
SHI16624 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-07 58.5 59 37.3
SHI35886 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-07 58.5 60 40.0
SHI53870 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-07 58.5 61 39.3
SHI33265 Sapria himalayana HOM05D000024 ORTHO05D000006 8.2e-07 57.8 59 40.7
Nitab4.5_0000032g0490 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-06 57.4 45 64.4
Nitab4.5_0001123g0050 Nicotiana tabacum HOM05D011002 ORTHO05D000006 1.1e-06 57.4 90 42.2
SHI15747 Sapria himalayana HOM05D000024 ORTHO05D000006 1.1e-06 57.4 59 39.0
SHI45778 Sapria himalayana HOM05D000024 ORTHO05D000006 1.1e-06 57.4 60 40.0
SHI46797 Sapria himalayana HOM05D000024 ORTHO05D000006 1.1e-06 57.4 64 35.9
SHI49137 Sapria himalayana HOM05D000024 ORTHO05D000006 1.1e-06 57.4 59 37.3
SHI49279 Sapria himalayana HOM05D000024 ORTHO05D000006 1.1e-06 57.4 60 40.0
Nitab4.5_0000071g0300 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-06 57.0 48 50.0
SHI34333 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-06 57.0 60 38.3
SHI40764 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-06 57.0 117 30.8
SHI41013 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-06 57.0 117 30.8
SHI45781 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-06 57.0 59 39.0
SHI22070 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-06 56.6 59 39.0
SHI44986 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-06 56.6 58 37.9
SHI04746 Sapria himalayana HOM05D000024 ORTHO05D000006 2.4e-06 56.2 59 35.6
SHI33697 Sapria himalayana HOM05D000024 ORTHO05D000006 2.4e-06 56.2 58 36.2
SHI36683 Sapria himalayana HOM05D000024 ORTHO05D000006 2.4e-06 56.2 60 41.7
SHI47861 Sapria himalayana HOM05D000024 ORTHO05D000006 2.4e-06 56.2 60 38.3
Nitab4.5_0002591g0070 Nicotiana tabacum HOM05D011002 ORTHO05D000006 3.1e-06 55.8 50 48.0
SHI29951 Sapria himalayana HOM05D000024 ORTHO05D000006 3.1e-06 55.8 58 36.2
SHI37215 Sapria himalayana HOM05D000024 ORTHO05D000006 3.1e-06 55.8 61 36.1
SHI38431 Sapria himalayana HOM05D000024 ORTHO05D022887 3.1e-06 55.8 61 36.1
SHI49513 Sapria himalayana HOM05D000024 ORTHO05D000006 3.1e-06 55.8 58 36.2
SHI30896 Sapria himalayana HOM05D000024 ORTHO05D000006 4.1e-06 55.5 59 35.6
SHI34322 Sapria himalayana HOM05D000024 ORTHO05D000006 4.1e-06 55.5 60 38.3
SHI34352 Sapria himalayana HOM05D000024 ORTHO05D000006 4.1e-06 55.5 62 35.5
SHI24107 Sapria himalayana HOM05D000024 ORTHO05D000006 5.3e-06 55.1 60 38.3
SHI39165 Sapria himalayana HOM05D000024 ORTHO05D000006 5.3e-06 55.1 59 35.6
SHI46359 Sapria himalayana HOM05D000024 ORTHO05D000006 5.3e-06 55.1 60 36.7
Nitab4.5_0000270g0240 Nicotiana tabacum HOM05D008844 ORTHO05D283287 6.9e-06 54.7 34 67.6
Nitab4.5_0003940g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.9e-06 54.7 46 50.0
SHI28045 Sapria himalayana HOM05D000024 ORTHO05D000006 6.9e-06 54.7 60 38.3
SHI46723 Sapria himalayana HOM05D000024 ORTHO05D000006 6.9e-06 54.7 61 37.7
SHI51450 Sapria himalayana HOM05D000024 ORTHO05D000006 6.9e-06 54.7 59 35.6
Nitab4.5_0003178g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.1e-06 54.3 53 47.2


User provided reference genes

Program Settings