Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000030g0490 Nicotiana tabacum HOM05D004228 ORTHO05D005137 3.3e-62 241.5 119 100.0
Nitab4.5_0002244g0110 Nicotiana tabacum HOM05D004228 ORTHO05D005137 3.1e-60 235.0 119 96.6
Solyc08g075390.4 Solanum lycopersicum HOM05D004228 ORTHO05D005137 1.3e-53 213.0 117 90.6
Sopen08g024020 Solanum pennellii HOM05D004228 ORTHO05D005137 2.8e-53 211.8 117 90.6
CAN.G930.1 Capsicum annuum HOM05D004228 ORTHO05D005137 1.7e-50 202.6 117 86.3
Prupe.3G104700 Prunus persica HOM05D004228 ORTHO05D005137 4.2e-49 198.0 106 88.7
Gohir.A10G000600 Gossypium hirsutum HOM05D004228 ORTHO05D005137 7.9e-48 193.7 108 85.2
MSTRG.13911 Avicennia marina HOM05D004228 ORTHO05D005137 1.3e-47 193.0 113 83.2
Gorai.008G198300 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.7e-47 192.6 108 84.3
Gorai.011G001100 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.7e-47 192.6 108 84.3
Thecc.06G048200 Theobroma cacao HOM05D004228 ORTHO05D005137 1.7e-47 192.6 109 82.6
Aqoxy7G02340 Aquilegia oxysepala HOM05D004228 ORTHO05D005137 3.9e-47 191.4 106 87.7
Gohir.D10G000700 Gossypium hirsutum HOM05D004228 ORTHO05D005137 6.6e-47 190.7 108 83.3
Ca_13679_v3 Cicer arietinum L. HOM05D004228 ORTHO05D005137 8.7e-47 190.3 113 83.2
Cc08_g05800 Coffea canephora HOM05D004228 ORTHO05D005137 8.7e-47 190.3 115 80.0
Duzib160G0712 Durio zibethinus HOM05D004228 ORTHO05D005137 8.7e-47 190.3 108 83.3
Migut.E01375 Erythranthe guttata HOM05D004228 ORTHO05D005137 8.7e-47 190.3 117 76.9
Sed0017026 Sechium edule HOM05D004228 ORTHO05D005137 1.1e-46 189.9 117 79.5
Gohir.D12G184901 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.5e-46 189.5 108 82.4
CANSAT64G2586 Cannabis sativa HOM05D004228 ORTHO05D005137 1.9e-46 189.1 106 84.0
MELO3C023479.2 Cucumis melo HOM05D004228 ORTHO05D005137 1.9e-46 189.1 109 84.4
Rhsim08G0202500 Rhododendron simsii HOM05D004228 ORTHO05D005137 2.5e-46 188.7 115 80.0
arahy.Tifrunner.gnm1.ann1.1BZV33 Arachis hypogaea HOM05D004228 ORTHO05D005137 3.3e-46 188.3 114 81.6
Hma1.2p1_0338F.1_g129690 Hydrangea macrophylla HOM05D004228 ORTHO05D005137 3.3e-46 188.3 115 82.6
arahy.Tifrunner.gnm1.ann1.W5V7W0 Arachis hypogaea HOM05D004228 ORTHO05D005137 4.3e-46 188.0 114 81.6
FvH4_6g28160 Fragaria vesca HOM05D004228 ORTHO05D005137 4.3e-46 188.0 106 84.0
TAR626G1406 Trochodendron aralioides HOM05D004228 ORTHO05D005137 4.3e-46 188.0 106 84.9
Dinv21435 Davidia involucrata HOM05D004228 ORTHO05D005137 7.3e-46 187.2 108 84.3
MD17G1227300 Malus domestica HOM05D004228 ORTHO05D005137 7.3e-46 187.2 107 80.4
THA.LOC104813593 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 7.3e-46 187.2 105 83.8
CsaV3_7G031780 Cucumis sativus L. HOM05D004228 ORTHO05D005137 1.3e-45 186.4 109 82.6
Lsat_1_v5_gn_6_17241 Lactuca sativa HOM05D004228 ORTHO05D005137 1.3e-45 186.4 106 84.0
Glyma.13G072500 Glycine max HOM05D004228 ORTHO05D005137 1.6e-45 186.0 105 85.7
Oeu057158.1 Olea europaea HOM05D004228 ORTHO05D005137 1.6e-45 186.0 118 76.3
GSVIVG01016092001 Vitis vinifera HOM05D004228 ORTHO05D005137 1.6e-45 186.0 109 80.7
CiPaw.02G164000 Carya illinoinensis HOM05D004228 ORTHO05D005137 3.6e-45 184.9 106 82.1
Psat4g022640 Pisum sativum HOM05D004228 ORTHO05D005137 3.6e-45 184.9 107 83.2
Gorai.006G048700 Gossypium raimondii HOM05D004228 ORTHO05D005137 4.8e-45 184.5 108 80.6
Lj6g0018144 Lotus japonicus HOM05D004228 ORTHO05D005137 4.8e-45 184.5 117 78.6
RcHm_v2.0_Chr2g0132121 Rosa chinensis HOM05D004228 ORTHO05D005137 4.8e-45 184.5 109 80.7
HanXRQChr17g0558091 Helianthus annuus HOM05D004228 ORTHO05D005137 8.1e-45 183.7 105 82.9
Potri.003G185600 Populus trichocarpa HOM05D004228 ORTHO05D005137 8.1e-45 183.7 104 82.7
Potri.003G185776 Populus trichocarpa HOM05D004228 ORTHO05D005137 8.1e-45 183.7 104 82.7
MELO3C023478.2 Cucumis melo HOM05D004228 ORTHO05D005137 1.1e-44 183.3 109 81.7
Gorai.007G245800 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.1e-44 183.3 108 80.6
Actinidia25487 Actinidia chinensis HOM05D004228 ORTHO05D005137 1.8e-44 182.6 108 78.7
Carub.0002s2655 Capsella rubella HOM05D004228 ORTHO05D005137 2.4e-44 182.2 105 81.9
CsaV3_7G031770 Cucumis sativus L. HOM05D004228 ORTHO05D005137 3.1e-44 181.8 109 82.6
TWI12G1267 Tripterygium wilfordii HOM05D004228 ORTHO05D005137 4.0e-44 181.4 106 81.1
Potri.003G185951 Populus trichocarpa HOM05D004228 ORTHO05D005137 5.3e-44 181.0 104 81.7
CSS0026873 Camellia sinensis var. sinensis HOM05D004228 ORTHO05D005137 6.9e-44 180.6 106 81.1
ECA240G4106 Erigeron canadensis HOM05D004228 ORTHO05D005137 6.9e-44 180.6 107 80.4
HanXRQChr13g0411161 Helianthus annuus HOM05D004228 ORTHO05D005137 6.9e-44 180.6 105 81.0
Lalb_Chr18g0048351 Lupinus albus HOM05D004228 ORTHO05D005137 6.9e-44 180.6 111 79.3
HPP92_017167 Vanilla planifolia HOM05D004228 ORTHO05D005137 6.9e-44 180.6 117 76.9
Ah.09g231750 Amaranthus hybridus HOM05D004228 ORTHO05D005137 9.0e-44 180.3 109 78.0
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 9.0e-44 180.3 105 80.0
AT1G79690 Arabidopsis thaliana HOM05D004228 ORTHO05D005137 1.2e-43 179.9 105 81.0
AUR62002649 Chenopodium quinoa HOM05D004228 ORTHO05D005137 1.2e-43 179.9 112 75.9
Ciclev10024933m.g Citrus clementina HOM05D004228 ORTHO05D005137 1.2e-43 179.9 108 77.8
Lsat_1_v5_gn_3_53241 Lactuca sativa HOM05D004228 ORTHO05D005137 1.2e-43 179.9 106 83.0
AUR62034058 Chenopodium quinoa HOM05D004228 ORTHO05D005137 1.5e-43 179.5 109 77.1
DCAR_030908 Daucus carota HOM05D004228 ORTHO05D005137 1.5e-43 179.5 111 76.6
PSO017G2203 Papaver somniferum HOM05D004228 ORTHO05D005137 2.0e-43 179.1 105 82.9
CARHR073460 Cardamine hirsuta HOM05D004228 ORTHO05D005137 2.6e-43 178.7 105 80.0
PSO170G5168 Papaver somniferum HOM05D004228 ORTHO05D005137 2.6e-43 178.7 105 81.9
Phvul.006G018900 Phaseolus vulgaris HOM05D004228 ORTHO05D005137 2.6e-43 178.7 103 82.5
Actinidia18265 Actinidia chinensis HOM05D004228 ORTHO05D005137 3.4e-43 178.3 108 77.8
AL2G40390 Arabidopsis lyrata HOM05D004228 ORTHO05D005137 3.4e-43 178.3 105 81.0
Sp5g34750 Schrenkiella parvula HOM05D004228 ORTHO05D005137 4.5e-43 177.9 105 80.0
Thhalv10018131m.g Eutrema salsugineum HOM05D004228 ORTHO05D005137 5.8e-43 177.6 112 75.9
EL10Ac8g19421 Beta vulgaris HOM05D004228 ORTHO05D005137 9.9e-43 176.8 106 80.2
BcaB02g07234 Brassica carinata HOM05D004228 ORTHO05D005137 9.9e-43 176.8 105 79.0
unitig_37.g12907 Utricularia gibba HOM05D004228 ORTHO05D005137 9.9e-43 176.8 118 73.7
VMungo0540G0565 Vigna mungo HOM05D004228 ORTHO05D005137 1.3e-42 176.4 103 82.5
Aa31LG4G1300 Aethionema arabicum HOM05D004228 ORTHO05D005137 6.4e-42 174.1 105 80.0
BcaNung04171 Brassica carinata HOM05D004228 ORTHO05D005137 6.4e-42 174.1 105 76.2
MBI14_g16438_MAGBIO Magnolia biondii HOM05D004228 ORTHO05D005137 1.1e-41 173.3 113 73.5
AagrBONN_evm.TU.Sc2ySwM_117.2286 Anthoceros agrestis HOM05D004228 ORTHO05D005137 2.4e-41 172.2 105 79.0
BraA07t30343Z Brassica rapa HOM05D004228 ORTHO05D005137 2.4e-41 172.2 107 78.5
A07p26990 Brassica napus HOM05D004228 ORTHO05D005137 3.2e-41 171.8 107 77.6
ATR0789G048 Amborella trichopoda HOM05D004228 ORTHO05D005137 4.2e-41 171.4 107 77.6
BolC6t38132H Brassica oleracea HOM05D004228 ORTHO05D005137 9.3e-41 170.2 107 75.7
BcaC08g47528 Brassica carinata HOM05D004228 ORTHO05D005137 1.2e-40 169.9 105 77.1
FAN14G1073 Fragaria x ananassa HOM05D004228 ORTHO05D005137 1.6e-40 169.5 143 62.2
C06p29710 Brassica napus HOM05D004228 ORTHO05D005137 2.7e-40 168.7 107 75.7
Zm00001eb192570 Zea mays HOM05D004228 ORTHO05D005137 2.7e-40 168.7 110 73.6
FAN09G0969 Fragaria x ananassa HOM05D004228 ORTHO05D005137 4.6e-40 167.9 147 60.5
Os02g0793300 Oryza sativa ssp. japonica HOM05D004228 ORTHO05D005137 4.6e-40 167.9 110 74.5
BcaB02g08706 Brassica carinata HOM05D004228 ORTHO05D005137 6.0e-40 167.5 105 73.3
SEGI_04747 Sequoiadendron giganteum HOM05D004228 ORTHO05D005137 1.3e-39 166.4 107 72.0
Haze_16698 Corylus avellana HOM05D004228 ORTHO05D005137 1.3e-37 159.8 117 69.2
ClCG09G003440 Citrullus lanatus HOM05D004228 ORTHO05D005137 8.1e-37 157.1 114 71.1
FAN02G0140 Fragaria x ananassa HOM05D004228 ORTHO05D005137 3.1e-36 155.2 86 84.9
MD09G1229100 Malus domestica HOM05D004228 ORTHO05D005137 6.9e-36 154.1 86 81.4
Pp3c5_190 Physcomitrium patens HOM05D004228 ORTHO05D005137 6.9e-36 154.1 104 71.2
SMO337G0028 Selaginella moellendorffii HOM05D004228 ORTHO05D005137 9.0e-36 153.7 104 71.2
Atru.chr1.2817 Acer truncatum HOM05D004228 ORTHO05D005137 2.0e-35 152.5 85 85.9
Mapoly0059s0059 Marchantia polymorpha HOM05D004228 ORTHO05D005137 2.6e-35 152.1 103 70.9
A07p44700 Brassica napus HOM05D004228 ORTHO05D005137 3.4e-35 151.8 113 67.3
BraA07t31978Z Brassica rapa HOM05D004228 ORTHO05D005137 3.4e-35 151.8 113 67.3
Sabra03G0135800 Salix brachista HOM05D004228 ORTHO05D005137 3.4e-35 151.8 119 68.1
C06p53520 Brassica napus HOM05D004228 ORTHO05D005137 4.5e-35 151.4 115 66.1
BolC6t40368H Brassica oleracea HOM05D004228 ORTHO05D005137 4.5e-35 151.4 115 66.1
Lsat_1_v5_gn_3_49001 Lactuca sativa HOM05D004228 ORTHO05D005137 1.3e-34 149.8 85 83.5
Nn8g40122 Nelumbo nucifera HOM05D004228 ORTHO05D005137 3.8e-34 148.3 100 74.0
ECA240G2553 Erigeron canadensis HOM05D004228 ORTHO05D005137 4.2e-33 144.8 83 81.9
Gorai.002G214900 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.3e-31 139.8 82 79.3
DCAR_002193 Daucus carota HOM05D004228 ORTHO05D005137 2.3e-31 139.0 89 76.4
Gohir.A06G076350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 2.5e-30 135.6 101 69.3
Gohir.D02G099801 Gossypium hirsutum HOM05D004228 ORTHO05D005137 2.5e-30 135.6 101 69.3
Gohir.A07G034550 Gossypium hirsutum HOM05D004228 ORTHO05D005137 7.4e-30 134.0 101 67.3
Gohir.A05G304350 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.3e-29 133.3 86 75.6
Gohir.D13G121066 Gossypium hirsutum HOM05D004228 ORTHO05D005137 1.8e-28 129.4 82 73.2
COL.COLO4_26791 Corchorus olitorius HOM05D004228 ORTHO05D005137 1.2e-27 126.7 107 58.9
Peaxi162Scf00193g00726 Petunia axillaris HOM05D004228 ORTHO05D005137 3.4e-27 125.2 99 65.7
CBR_g49119 Chara braunii HOM05D004228 ORTHO05D005137 1.9e-25 119.4 90 63.3
MELO3C023481.2 Cucumis melo HOM05D004228 ORTHO05D005137 4.2e-25 118.2 99 62.6
Lsat_1_v5_gn_0_21260 Lactuca sativa HOM05D004228 ORTHO05D005137 4.2e-25 118.2 117 54.7
ATR0580G052 Amborella trichopoda HOM05D004228 ORTHO05D005137 9.3e-25 117.1 81 64.2
MD00G1188000 Malus domestica HOM05D004228 ORTHO05D005137 2.3e-23 112.5 72 73.6
THA.LOC104808168 Tarenaya hassleriana HOM05D004228 ORTHO05D005137 5.1e-23 111.3 104 58.7
Gohir.D09G001001 Gossypium hirsutum HOM05D004228 ORTHO05D005137 3.2e-17 92.0 63 71.4
Gorai.009G406300 Gossypium raimondii HOM05D004228 ORTHO05D005137 1.8e-15 86.3 63 68.3
arahy.Tifrunner.gnm1.ann1.XEX8KQ Arachis hypogaea HOM05D004228 ORTHO05D005137 1.1e-14 83.6 121 44.6
MCO12G087 Micromonas commoda HOM05D004228 ORTHO05D005137 2.5e-14 82.4 95 43.2
VMungo1080G1878 Vigna mungo HOM05D004228 ORTHO05D005137 3.3e-14 82.0 75 54.7
arahy.Tifrunner.gnm1.ann1.GHRN5T Arachis hypogaea HOM05D004228 ORTHO05D005137 7.4e-14 80.9 100 51.0
Gohir.A11G044150 Gossypium hirsutum HOM05D004228 ORTHO05D005137 7.4e-14 80.9 55 70.9
vmacro19079 Vaccinium macrocarpon HOM05D004228 ORTHO05D005137 1.8e-12 76.3 91 48.4
Cre08.g381800 Chlamydomonas reinhardtii HOM05D004228 ORTHO05D005137 4.2e-09 65.1 95 41.1
arahy.Tifrunner.gnm1.ann1.H1NXHC Arachis hypogaea HOM05D000009 ORTHO05D000008 6.7e-07 57.8 30 90.0
Pp3c5_70 Physcomitrium patens HOM05D004228 ORTHO05D005137 1.5e-06 56.6 43 55.8
SGA_v2.0_scaffold1G00735_1 Striga asiatica HOM05D000001 ORTHO05D000003 3.3e-06 55.5 32 75.0


User provided reference genes

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