Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-55 219.9 116 100.0
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-34 149.8 139 60.4
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-32 141.4 147 57.1
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-31 139.0 171 50.3
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.5e-31 137.1 151 53.0
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-30 136.0 148 56.1
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-30 134.8 169 50.3
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-28 130.2 167 49.1
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-26 122.5 172 47.1
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-25 119.8 189 42.9
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-25 118.2 180 43.3
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-25 117.5 193 42.5
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-24 115.9 172 44.8
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-24 114.8 189 41.8
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-24 114.4 139 49.6
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-23 112.8 165 44.2
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-23 112.8 189 40.7
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-23 111.3 191 40.8
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-23 110.9 194 41.8
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-22 110.2 194 39.2
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-22 109.0 170 44.1
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-22 108.6 194 40.2
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-22 107.5 162 45.1
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-21 106.7 176 42.0
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-21 104.8 152 44.7
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-20 103.6 177 42.4
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-20 102.4 70 77.1
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-20 102.1 179 41.3
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-20 102.1 108 56.5
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-20 101.7 179 39.1
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-19 100.1 70 77.1
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-19 100.1 165 43.0
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-19 99.4 173 41.6
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-19 99.0 194 37.6
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-19 99.0 70 72.9
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.5e-19 97.4 182 37.4
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-18 95.9 70 71.4
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-18 95.1 70 70.0
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-18 95.1 181 37.0
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-18 95.1 70 72.9
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-18 94.4 73 69.9
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-16 90.1 70 72.9
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 2.0e-16 89.4 70 67.1
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-16 87.8 175 36.0
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-15 86.7 68 66.2
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-15 86.3 70 70.0
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-15 85.1 87 60.9
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.5e-15 84.0 56 76.8
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-13 79.3 70 62.9
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 2.7e-13 79.0 194 32.0
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-13 79.0 55 74.5
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-13 77.4 65 64.6
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-12 75.1 97 50.5
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-11 72.4 111 43.2
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 3.4e-11 72.0 73 56.2
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-11 71.6 45 73.3
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-11 71.2 55 74.5
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 7.5e-11 70.9 70 55.7
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 9.8e-11 70.5 70 55.7
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-10 69.7 167 32.3
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.2e-10 69.3 73 50.7
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-10 69.3 44 77.3
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-10 68.9 51 68.6
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-10 68.9 44 72.7
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-10 68.2 45 68.9
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-10 67.8 114 39.5
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 8.3e-10 67.4 70 52.9
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-10 67.4 108 37.0
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-09 66.6 45 68.9
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-09 66.2 50 74.0
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 3.1e-09 65.5 70 52.9
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.1e-09 65.1 70 50.0
Nitab4.5_0007170g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.1e-09 65.1 44 70.5
Nitab4.5_0000003g0850 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-09 64.3 54 61.1
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-09 63.9 54 64.8
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-09 63.9 106 36.8
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.1e-09 63.9 196 28.6
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-08 62.0 98 44.9
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-08 61.6 168 32.7
Nitab4.5_0001859g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-08 61.2 44 65.9
Solyc12g038730.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 5.9e-08 61.2 65 52.3
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 7.7e-08 60.8 62 54.8
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-08 60.8 196 28.6
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-07 60.5 89 47.2
Nitab4.5_0005121g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-07 60.1 45 64.4
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-07 60.1 67 47.8
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-07 60.1 45 62.2
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-07 59.7 40 80.0
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 2.9e-07 58.9 103 40.8
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 2.9e-07 58.9 103 40.8
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-07 58.9 57 59.6
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.8e-07 58.5 197 28.4
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 3.8e-07 58.5 62 50.0
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-07 58.2 66 53.0
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-07 58.2 68 48.5
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-07 57.4 57 61.4
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 1.5e-06 56.6 88 45.5
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-06 56.2 69 47.8
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 2.5e-06 55.8 66 50.0
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-06 55.5 38 65.8
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 5.5e-06 54.7 186 26.3
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-06 54.3 68 50.0
Nitab4.5_0011788g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.5e-06 53.9 44 56.8


User provided reference genes

Program Settings