Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.1e-279 966.1 531 100.0
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 4.2e-258 894.4 531 93.2
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 9.4e-218 760.4 537 84.0
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 1.6e-217 759.6 537 83.8
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.6e-212 743.0 542 82.1
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 1.6e-209 733.0 509 82.1
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 1.5e-175 620.2 534 71.9
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.4e-157 560.5 510 64.1
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 2.6e-151 539.7 505 61.2
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 7.6e-151 538.1 506 61.3
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 2.9e-150 536.2 508 61.4
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 3.9e-147 525.8 504 60.5
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 4.8e-145 518.8 508 60.4
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.7e-142 510.4 506 58.3
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 3.9e-139 499.2 504 58.3
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 3.3e-138 496.1 507 58.2
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 2.1e-137 493.4 504 57.9
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 2.1e-137 493.4 507 58.6
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 9.0e-136 488.0 559 58.9
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 2.0e-135 486.9 504 57.1
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 3.0e-131 473.0 504 56.0
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 6.7e-131 471.9 505 55.8
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.1e-130 471.1 504 55.8
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 1.1e-130 471.1 510 57.5
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.5e-130 469.9 506 55.7
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 2.8e-129 466.5 503 55.1
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 1.1e-128 464.5 504 54.8
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 1.4e-128 464.2 506 55.7
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 2.4e-128 463.4 539 57.5
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 4.5e-127 459.1 538 56.3
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 1.0e-126 458.0 506 55.5
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 1.7e-126 457.2 558 51.3
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 8.4e-126 454.9 506 55.1
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 1.8e-123 447.2 504 55.4
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 8.7e-123 444.9 507 54.0
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 1.1e-122 444.5 527 52.4
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 6.3e-121 438.7 505 53.5
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 9.0e-120 434.9 506 54.9
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 2.0e-119 433.7 506 53.0
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.9e-118 429.9 566 49.6
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 8.5e-118 428.3 567 49.7
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.1e-117 427.9 566 49.5
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 4.2e-117 426.0 505 52.5
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 7.2e-117 425.2 474 53.6
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 1.8e-115 420.6 507 52.7
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 4.3e-114 416.0 505 52.7
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 2.2e-113 413.7 505 52.3
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 1.2e-108 397.9 437 55.1
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 7.9e-108 395.2 590 46.3
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 1.8e-107 394.0 437 57.0
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.3e-107 393.7 506 48.4
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 5.7e-106 389.0 510 51.0
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 1.1e-104 384.8 516 51.2
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 1.4e-104 384.4 513 50.3
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 3.1e-104 383.3 513 50.1
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 3.1e-104 383.3 460 52.8
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 9.1e-104 381.7 524 49.0
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 9.1e-104 381.7 512 49.8
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 1.5e-103 380.9 508 49.6
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 8.5e-102 375.2 480 51.9
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 7.2e-101 372.1 513 49.1
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 1.2e-100 371.3 509 48.5
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 3.6e-100 369.8 543 50.1
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 3.6e-100 369.8 543 50.1
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 2.3e-99 367.1 511 48.9
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 1.1e-98 364.8 512 49.4
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 1.2e-95 354.8 473 49.3
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 2.6e-95 353.6 453 50.1
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 1.2e-92 344.7 360 56.9
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 8.0e-92 342.0 503 48.1
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 6.7e-91 339.0 502 46.6
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 2.6e-90 337.0 538 44.6
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 2.4e-88 330.5 377 56.2
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 3.5e-87 326.6 421 52.5
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.3e-86 324.7 429 49.4
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 2.2e-86 323.9 509 45.2
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 4.2e-77 293.1 422 49.1
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 1.4e-67 261.5 393 45.3
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.1e-64 251.9 260 57.7
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 3.0e-54 217.2 325 46.5
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 1.5e-42 178.3 320 43.8
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 5.1e-38 163.3 317 41.0
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 2.5e-29 134.4 249 39.0
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 2.8e-28 131.0 554 31.4
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.5e-26 125.2 314 35.4
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 4.5e-26 123.6 171 46.8
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 2.4e-24 117.9 79 79.7
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 5.4e-24 116.7 166 47.0
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.6e-23 115.2 499 28.3
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 6.7e-22 109.8 237 35.0
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 7.4e-21 106.3 76 75.0
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 3.4e-18 97.4 67 70.1
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 4.5e-18 97.1 68 72.1
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 9.9e-18 95.9 53 92.5
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 6.7e-14 83.2 67 64.2
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 7.4e-13 79.7 44 88.6
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 3.7e-12 77.4 42 92.9
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.1e-11 75.9 84 59.5
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 8.4e-09 66.2 63 57.1
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 8.4e-09 66.2 63 57.1
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 1.4e-08 65.5 294 28.6
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 1.0e-06 59.3 46 67.4
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 1.0e-06 59.3 65 52.3


User provided reference genes

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