Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 9.3e-198 693.3 351 100.0
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 8.2e-162 573.9 300 96.7
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 5.5e-142 508.1 300 85.3
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 1.6e-141 506.5 300 85.0
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 2.0e-139 499.6 300 84.3
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 1.3e-101 374.0 282 66.7
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 2.3e-95 353.2 274 63.1
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 1.5e-94 350.5 274 63.5
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 5.6e-94 348.6 274 63.1
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 5.6e-94 348.6 274 65.0
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.6e-93 347.1 274 63.1
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 2.8e-93 346.3 296 59.5
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.6e-93 345.9 277 62.5
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 3.6e-93 345.9 276 64.1
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 6.2e-93 345.1 299 60.2
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 3.1e-92 342.8 300 58.3
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 9.0e-92 341.3 276 62.7
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 1.2e-91 340.9 277 63.2
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 1.5e-91 340.5 295 60.0
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 2.6e-91 339.7 291 59.1
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 7.6e-91 338.2 296 60.8
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 2.2e-90 336.7 277 62.5
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 3.8e-90 335.9 276 62.7
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 6.4e-90 335.1 254 65.7
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 3.2e-89 332.8 301 58.8
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 2.1e-88 330.1 277 61.0
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 2.1e-88 330.1 299 57.9
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 2.1e-88 330.1 299 57.9
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 2.7e-88 329.7 274 63.5
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 3.5e-88 329.3 274 61.3
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 3.5e-88 329.3 274 62.0
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 4.6e-88 328.9 277 60.6
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.0e-87 327.8 274 61.3
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.3e-87 327.4 274 61.7
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 3.0e-87 326.2 297 58.2
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 6.7e-87 325.1 259 64.9
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.5e-86 323.2 273 60.8
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 4.8e-85 318.9 182 83.5
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 1.1e-84 317.8 274 59.5
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 3.1e-84 316.2 303 57.1
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 1.2e-83 314.3 274 59.5
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 1.5e-83 313.9 297 53.9
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 2.0e-83 313.5 224 65.6
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 2.0e-83 313.5 379 48.0
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 2.6e-83 313.2 297 56.2
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 2.6e-83 313.2 297 56.6
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 2.6e-83 313.2 273 58.6
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 4.5e-83 312.4 298 56.0
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 7.6e-83 311.6 297 54.5
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 1.0e-82 311.2 274 59.1
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 1.7e-82 310.5 273 59.7
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 3.8e-82 309.3 280 56.4
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 1.1e-81 307.8 274 59.5
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 4.2e-81 305.8 235 68.1
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 5.5e-81 305.4 274 56.6
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 1.3e-79 300.8 278 55.8
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 1.8e-79 300.4 274 56.6
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 2.3e-79 300.1 263 59.3
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 2.3e-79 300.1 296 55.7
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 3.0e-79 299.7 274 55.8
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 8.7e-79 298.1 274 56.2
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 8.7e-79 298.1 274 56.2
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 1.9e-78 297.0 273 57.5
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 3.3e-78 296.2 248 62.1
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 3.3e-78 296.2 295 51.9
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 7.6e-75 285.0 235 62.1
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 1.7e-74 283.9 253 58.9
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 1.1e-73 281.2 292 51.0
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 1.9e-73 280.4 275 52.4
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 1.2e-72 277.7 283 51.9
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 3.5e-72 276.2 297 50.5
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 6.1e-72 275.4 232 60.3
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 7.9e-72 275.0 282 51.8
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 3.0e-71 273.1 290 51.0
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 1.9e-70 270.4 277 52.0
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 3.3e-70 269.6 285 50.5
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 4.3e-70 269.2 207 67.6
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 4.3e-70 269.2 282 51.1
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 4.8e-69 265.8 284 50.7
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 4.8e-69 265.8 194 66.5
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 6.3e-69 265.4 295 50.8
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 1.8e-68 263.8 303 48.8
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 3.1e-68 263.1 194 69.1
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 6.9e-68 261.9 294 49.3
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 6.9e-68 261.9 294 49.3
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 6.9e-68 261.9 298 48.0
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 9.0e-68 261.5 284 49.6
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.5e-67 260.8 297 48.5
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.5e-67 260.8 297 48.5
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 2.0e-67 260.4 296 50.0
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 1.0e-66 258.1 267 52.4
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.1e-65 254.6 374 41.4
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 3.2e-65 253.1 304 46.4
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 3.2e-65 253.1 275 50.9
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 4.2e-65 252.7 316 44.6
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 7.2e-65 251.9 264 50.8
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.6e-64 250.8 177 70.6
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 2.1e-64 250.4 216 58.3
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 3.0e-63 246.5 187 66.8
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 1.1e-62 244.6 306 46.4
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 1.1e-62 244.6 245 52.2
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 1.1e-62 244.6 204 66.7
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 4.3e-62 242.7 297 45.5
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 2.8e-61 240.0 277 48.0
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 3.7e-61 239.6 242 55.4
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.2e-59 234.6 216 57.4
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 4.5e-59 232.6 204 58.3
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 1.1e-57 228.0 273 48.0
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 1.2e-56 224.6 290 46.2
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 2.0e-54 217.2 263 47.1
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 3.2e-49 199.9 242 45.9
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 1.4e-47 194.5 290 42.4
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 6.7e-47 192.2 174 57.5
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 1.5e-46 191.0 282 42.6
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 5.0e-42 176.0 186 48.9
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 6.5e-42 175.6 174 52.3
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 1.3e-34 151.4 189 43.4
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 8.5e-34 148.7 148 54.7
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 9.1e-28 128.6 82 69.5
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 3.6e-24 116.7 242 36.0
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 8.3e-21 105.5 257 28.8
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 1.2e-14 85.1 117 41.0
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 2.9e-13 80.5 145 42.8
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 4.9e-13 79.7 44 81.8
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 4.9e-13 79.7 105 41.9
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 1.2e-11 75.1 50 66.0
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.6e-11 74.7 105 35.2
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.9e-09 67.8 107 34.6
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 2.5e-09 67.4 40 65.0


User provided reference genes

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