Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 3.3e-104 381.7 194 100.0
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.4e-57 226.9 132 90.9
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 8.3e-55 217.6 131 87.8
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 3.3e-51 205.7 129 85.3
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 3.3e-51 205.7 129 85.3
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.2e-48 197.2 127 83.5
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 9.2e-46 187.6 172 64.5
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 2.8e-42 176.0 146 63.0
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 2.9e-39 166.0 146 60.3
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 4.9e-39 165.2 146 61.0
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 6.0e-37 158.3 139 61.2
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 5.0e-36 155.2 147 55.1
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.0e-36 155.2 147 57.1
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.9e-35 153.3 145 57.9
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 9.5e-35 151.0 142 57.0
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 1.2e-34 150.6 142 57.7
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.2e-34 150.6 111 67.6
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 2.1e-34 149.8 115 67.0
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 3.6e-34 149.1 116 65.5
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 6.2e-34 148.3 120 66.7
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 8.1e-34 147.9 192 47.4
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 1.8e-33 146.7 146 56.2
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.0e-33 145.6 137 55.5
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 4.0e-33 145.6 137 56.2
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 5.2e-33 145.2 107 69.2
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 5.2e-33 145.2 129 62.0
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 6.8e-33 144.8 111 67.6
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 8.9e-33 144.4 111 65.8
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 8.9e-33 144.4 150 53.3
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 1.2e-32 144.1 150 54.7
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 2.6e-32 142.9 186 48.4
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 4.4e-32 142.1 109 71.6
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 7.5e-32 141.4 118 65.3
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 2.2e-31 139.8 111 65.8
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 2.9e-31 139.4 111 63.1
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 3.7e-31 139.0 110 67.3
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 4.9e-31 138.7 182 48.4
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 6.4e-31 138.3 108 66.7
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 6.4e-31 138.3 120 63.3
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 8.3e-31 137.9 124 60.5
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 1.1e-30 137.5 105 68.6
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 1.1e-30 137.5 107 66.4
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 1.1e-30 137.5 107 67.3
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.4e-30 137.1 143 53.1
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 2.4e-30 136.3 137 54.7
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.2e-29 134.0 111 61.3
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 1.6e-29 133.7 182 47.8
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 1.6e-29 133.7 111 62.2
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.1e-29 133.3 106 66.0
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 3.5e-29 132.5 107 65.4
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 4.6e-29 132.1 111 60.4
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.6e-29 132.1 111 60.4
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 6.0e-29 131.7 110 60.0
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 6.0e-29 131.7 121 57.9
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 7.8e-29 131.3 112 59.8
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 3.0e-28 129.4 116 58.6
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 3.0e-28 129.4 116 57.8
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 3.9e-28 129.0 163 49.7
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 6.6e-28 128.3 111 58.6
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 8.6e-28 127.9 116 56.9
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 1.5e-27 127.1 116 57.8
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 2.5e-27 126.3 116 56.9
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 2.5e-27 126.3 116 56.9
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 2.5e-27 126.3 116 56.9
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 4.3e-27 125.6 112 58.9
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 4.3e-27 125.6 112 58.9
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 4.3e-27 125.6 125 53.6
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 4.3e-27 125.6 125 53.6
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 7.3e-27 124.8 112 58.9
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 7.3e-27 124.8 109 58.7
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.2e-26 124.0 105 61.0
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.6e-26 123.6 166 47.0
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 2.8e-26 122.9 121 55.4
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 3.6e-26 122.5 147 48.3
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 6.2e-26 121.7 155 49.0
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 8.1e-26 121.3 204 39.7
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 8.1e-26 121.3 144 47.2
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 1.1e-25 120.9 161 46.6
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.4e-25 120.6 113 60.2
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 1.8e-25 120.2 120 54.2
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 6.8e-25 118.2 111 55.0
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 6.8e-25 118.2 108 56.5
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 1.2e-24 117.5 134 47.8
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.6e-24 116.3 109 57.8
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 3.4e-24 115.9 107 57.0
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 9.9e-24 114.4 104 60.6
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 9.9e-24 114.4 126 46.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 1.3e-23 114.0 158 47.5
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 3.8e-23 112.5 140 52.1
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 4.9e-23 112.1 144 44.4
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 6.4e-23 111.7 129 48.8
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.2e-22 109.4 129 47.3
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 7.8e-21 104.8 108 51.9
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.9e-20 102.4 109 51.4
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 8.6e-20 101.3 102 55.9
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 3.3e-19 99.4 89 57.3
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 4.3e-19 99.0 124 46.0
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 2.8e-18 96.3 156 40.4
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 4.7e-18 95.5 93 52.7
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 2.4e-14 83.2 55 81.8
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.7e-13 79.7 134 38.8
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 9.6e-11 71.2 131 35.9
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 2.8e-10 69.7 58 62.1
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.8e-10 69.7 191 30.9
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 5.8e-08 62.0 70 50.0
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.4e-07 58.2 67 46.3
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.4e-06 57.4 97 36.1


User provided reference genes

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