Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000028g0240 Nicotiana tabacum HOM05D006756 ORTHO05D001869 0.0e+00 1284.6 767 100.0
Nitab4.5_0006268g0010 Nicotiana tabacum HOM05D006756 ORTHO05D001869 6.0e-290 1000.7 802 75.2
Sopen07g004070 Solanum pennellii HOM05D006756 ORTHO05D001869 1.1e-235 820.5 813 60.1
Solyc07g008190.4 Solanum lycopersicum HOM05D006756 ORTHO05D001869 5.9e-229 798.1 813 59.3
Peaxi162Scf00046g00819 Petunia axillaris HOM05D006756 ORTHO05D001869 1.6e-226 790.0 779 59.1
CAN.G573.9 Capsicum annuum HOM05D006756 ORTHO05D001869 1.4e-222 776.9 807 58.0
Dinv36508 Davidia involucrata HOM05D006756 ORTHO05D001869 1.2e-91 342.0 794 35.1
CSS0003155 Camellia sinensis var. sinensis HOM05D006756 ORTHO05D001869 1.0e-79 302.4 784 33.0
Oeu058044.1 Olea europaea HOM05D006756 ORTHO05D001869 9.5e-78 295.8 768 35.3
TAR625G0109 Trochodendron aralioides HOM05D006756 ORTHO05D001869 4.4e-75 287.0 804 34.0
Cc06_g08320 Coffea canephora HOM05D006756 ORTHO05D001869 1.1e-73 282.3 752 31.8
Actinidia21975 Actinidia chinensis HOM05D006756 ORTHO05D001869 7.0e-73 279.6 783 32.4
GSVIVG01015553001 Vitis vinifera HOM05D006756 ORTHO05D001869 5.9e-72 276.6 759 32.5
TAR636G0745 Trochodendron aralioides HOM05D006756 ORTHO05D001869 2.9e-71 274.2 800 32.4
Ciclev10007561m.g Citrus clementina HOM05D006756 ORTHO05D001869 5.0e-71 273.5 751 32.1
Atru.chr7.1133 Acer truncatum HOM05D006756 ORTHO05D001869 8.6e-71 272.7 763 32.0
Rhsim01G0068000 Rhododendron simsii HOM05D006756 ORTHO05D001869 2.1e-69 268.1 802 31.7
Manes.14G133500 Manihot esculenta HOM05D006756 ORTHO05D001869 1.3e-66 258.8 782 31.1
vmacro20571 Vaccinium macrocarpon HOM05D006756 ORTHO05D001869 1.8e-65 255.0 778 31.9
Cpa.g.sc46.13 Carica papaya HOM05D006756 ORTHO05D001869 2.5e-62 244.6 788 29.7
Migut.K00444 Erythranthe guttata HOM05D006756 ORTHO05D001869 2.1e-61 241.5 741 31.0
Glyma.04G146900 Glycine max HOM05D006756 ORTHO05D001869 2.1e-61 241.5 785 30.2
Potri.018G129900 Populus trichocarpa HOM05D006756 ORTHO05D001869 2.3e-60 238.0 758 33.2
HanXRQChr06g0180441 Helianthus annuus HOM05D006756 ORTHO05D001869 5.8e-59 233.4 775 30.2
Sabra18G0110400 Salix brachista HOM05D006756 ORTHO05D001869 1.9e-57 228.4 785 35.5
Cfa003391 Carpinus fangiana HOM05D006756 ORTHO05D001869 7.0e-57 226.5 765 29.3
Prupe.7G245100 Prunus persica HOM05D006756 ORTHO05D001869 7.0e-57 226.5 766 28.7
SGA_v2.0_scaffold464G52008 Striga asiatica HOM05D006756 ORTHO05D001869 7.0e-57 226.5 752 30.2
QL02p088845 Quercus lobata HOM05D006756 ORTHO05D001869 1.6e-56 225.3 776 28.9
Thecc.09G128500 Theobroma cacao HOM05D006756 ORTHO05D001869 1.6e-56 225.3 735 28.8
ECA236G0350 Erigeron canadensis HOM05D006756 ORTHO05D001869 1.3e-55 222.2 778 29.8
Lalb_Chr11g0072181 Lupinus albus HOM05D006756 ORTHO05D001869 1.3e-55 222.2 774 28.9
TWI34G1307 Tripterygium wilfordii HOM05D006756 ORTHO05D001869 3.9e-55 220.7 781 28.2
Gohir.D06G054000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 5.0e-55 220.3 743 29.2
Duzib168G2156 Durio zibethinus HOM05D006756 ORTHO05D001869 6.6e-55 219.9 772 29.7
Gorai.010G063000 Gossypium raimondii HOM05D006756 ORTHO05D001869 4.3e-54 217.2 742 28.6
MD15G1171200 Malus domestica HOM05D006756 ORTHO05D001869 1.2e-53 215.7 778 29.3
DCAR_017806 Daucus carota HOM05D006756 ORTHO05D001869 3.6e-53 214.2 790 30.0
Gohir.A06G055000 Gossypium hirsutum HOM05D006756 ORTHO05D001869 1.1e-52 212.6 760 28.8
Lsat_1_v5_gn_8_58441 Lactuca sativa HOM05D006756 ORTHO05D001869 1.8e-52 211.8 762 29.0
RcHm_v2.0_Chr2g0088181 Rosa chinensis HOM05D006756 ORTHO05D001869 2.3e-52 211.5 735 29.8
MELO3C010331.2 Cucumis melo HOM05D006756 ORTHO05D001869 9.9e-51 206.1 745 29.1
MD02G1029800 Malus domestica HOM05D006756 ORTHO05D001869 1.3e-50 205.7 755 28.5
CsaV3_1G030330 Cucumis sativus L. HOM05D006756 ORTHO05D001869 1.7e-50 205.3 745 28.6
CiPaw.03G245600 Carya illinoinensis HOM05D006756 ORTHO05D001869 2.9e-50 204.5 739 27.7
FvH4_1g03050 Fragaria vesca HOM05D006756 ORTHO05D001869 2.9e-50 204.5 739 29.9
VMungo1309G0147 Vigna mungo HOM05D006756 ORTHO05D001869 6.4e-50 203.4 768 28.5
Medtr2g072590 Medicago truncatula HOM05D006756 ORTHO05D001869 3.2e-49 201.1 738 28.2
arahy.Tifrunner.gnm1.ann1.L57GI5 Arachis hypogaea HOM05D006756 ORTHO05D001869 1.6e-48 198.7 750 28.0
Haze_25558 Corylus avellana HOM05D006756 ORTHO05D001869 2.1e-48 198.4 843 27.0
Nn2g12064 Nelumbo nucifera HOM05D006756 ORTHO05D001869 2.1e-48 198.4 783 28.5
CANSAT11G2071 Cannabis sativa HOM05D006756 ORTHO05D001869 3.0e-47 194.5 798 27.8
Psat1g024440 Pisum sativum HOM05D006756 ORTHO05D001869 3.3e-46 191.0 745 28.5
SalBow1G7291 Salvia bowleyana HOM05D006756 ORTHO05D001869 7.3e-46 189.9 781 28.7
Eucgr.C01517 Eucalyptus grandis HOM05D006756 ORTHO05D001869 2.1e-45 188.3 759 28.7
TAR636G2086 Trochodendron aralioides HOM05D006756 ORTHO05D001869 2.4e-44 184.9 678 29.4
Medtr7g033910 Medicago truncatula HOM05D006756 ORTHO05D001869 3.1e-44 184.5 742 27.9
Phvul.009G207200 Phaseolus vulgaris HOM05D006756 ORTHO05D001869 5.2e-44 183.7 730 28.9
unitig_748.g7157 Utricularia gibba HOM05D006756 ORTHO05D001869 8.9e-44 183.0 578 31.5
arahy.Tifrunner.gnm1.ann1.BW9NFB Arachis hypogaea HOM05D006756 ORTHO05D001869 3.4e-43 181.0 750 26.9
ClCG06G011280 Citrullus lanatus HOM05D006756 ORTHO05D001869 5.8e-43 180.3 743 26.6
Lj1g0024911 Lotus japonicus HOM05D006756 ORTHO05D001869 5.8e-43 180.3 765 27.3
TPR.G9536 Trifolium pratense HOM05D006756 ORTHO05D001869 6.0e-40 170.2 765 27.2
Ca_02761_v3 Cicer arietinum L. HOM05D006756 ORTHO05D001869 7.8e-40 169.9 760 27.2
MBI01_g36593_MAGBIO Magnolia biondii HOM05D006756 ORTHO05D001869 1.7e-39 168.7 583 29.0
Sed0004031 Sechium edule HOM05D006756 ORTHO05D001869 3.9e-39 167.5 765 27.5
PSO170G5384 Papaver somniferum HOM05D006756 ORTHO05D001869 1.6e-37 162.2 595 30.3
PSO170G5619 Papaver somniferum HOM05D006756 ORTHO05D001869 2.0e-35 155.2 594 28.8
PGR142G2180 Punica granatum HOM05D006756 ORTHO05D001869 7.1e-33 146.7 577 28.4
PSO017G1657 Papaver somniferum HOM05D006756 ORTHO05D001869 9.3e-33 146.4 596 28.9
Ah.09g225260 Amaranthus hybridus HOM05D006756 ORTHO05D001869 2.1e-32 145.2 757 26.8
Duzib150G0144 Durio zibethinus HOM05D006756 ORTHO05D001869 2.1e-32 145.2 501 29.1
FAN23G1563 Fragaria x ananassa HOM05D006756 ORTHO05D001869 2.7e-32 144.8 757 26.6
Sc18g0000500 Simmondsia chinensis HOM05D006756 ORTHO05D001869 7.8e-32 143.3 497 28.8
Hund09258 Selenicereus undatus HOM05D006756 ORTHO05D001869 1.3e-31 142.5 797 26.1
Aqoxy7G02256 Aquilegia oxysepala HOM05D006756 ORTHO05D001869 5.3e-28 130.6 536 26.9
Sed0021917 Sechium edule HOM05D006756 ORTHO05D001869 9.0e-28 129.8 685 25.8
CARHR192620 Cardamine hirsuta HOM05D006756 ORTHO05D001869 2.0e-27 128.6 628 28.3
FAN26G0517 Fragaria x ananassa HOM05D006756 ORTHO05D001869 2.6e-27 128.3 769 25.5
Glyma.06G217700 Glycine max HOM05D006756 ORTHO05D001869 2.6e-27 128.3 307 33.9
THA.LOC104811027 Tarenaya hassleriana HOM05D006756 ORTHO05D001869 2.6e-27 128.3 591 26.7
AUR62013339 Chenopodium quinoa HOM05D006756 ORTHO05D001869 1.3e-26 125.9 577 30.2
COL.COLO4_35103 Corchorus olitorius HOM05D006756 ORTHO05D001869 1.3e-26 125.9 312 34.6
BcaC03g13743 Brassica carinata HOM05D006756 ORTHO05D001869 3.8e-26 124.4 767 25.4
Aa31LG1G14420 Aethionema arabicum HOM05D006756 ORTHO05D001869 2.1e-24 118.6 613 27.7
FAN28G3026 Fragaria x ananassa HOM05D006756 ORTHO05D001869 3.5e-24 117.9 585 27.0
AUR62011148 Chenopodium quinoa HOM05D006756 ORTHO05D001869 1.0e-23 116.3 574 29.4
EL10Ac8g18682 Beta vulgaris HOM05D006756 ORTHO05D001869 1.8e-23 115.5 575 27.5
HanXRQChr05g0140241 Helianthus annuus HOM05D006756 ORTHO05D001869 8.7e-23 113.2 425 28.5
AL6G31760 Arabidopsis lyrata HOM05D006756 ORTHO05D001869 1.5e-22 112.5 780 26.0
Thhalv10012771m.g Eutrema salsugineum HOM05D006756 ORTHO05D001869 1.5e-22 112.5 602 25.9
Actinidia40482 Actinidia chinensis HOM05D006756 ORTHO05D001869 1.3e-21 109.4 145 46.2
AT5G20200 Arabidopsis thaliana HOM05D006756 ORTHO05D001869 4.0e-20 104.4 781 25.7
BcaB05g22863 Brassica carinata HOM05D006756 ORTHO05D001869 5.3e-20 104.0 760 23.7
Sp6g24200 Schrenkiella parvula HOM05D006756 ORTHO05D001869 2.6e-19 101.7 773 24.2
BraA10t44048Z Brassica rapa HOM05D006756 ORTHO05D001869 1.3e-18 99.4 778 25.2
Glyma.06G217600 Glycine max HOM05D006756 ORTHO05D001869 6.4e-18 97.1 323 28.5
Carub.0006s1860 Capsella rubella HOM05D006756 ORTHO05D001869 8.4e-18 96.7 772 25.3
BcaC04g19408 Brassica carinata HOM05D006756 ORTHO05D001869 1.9e-17 95.5 586 25.1
BcaB08g36540 Brassica carinata HOM05D006756 ORTHO05D001869 1.6e-16 92.4 771 24.6
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.7e-16 91.7 759 24.2
PSO017G1072 Papaver somniferum HOM05D006756 ORTHO05D001869 3.9e-15 87.8 586 25.3
Dinv41496 Davidia involucrata HOM05D006756 ORTHO05D001869 1.9e-14 85.5 453 26.3
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.1e-12 78.2 534 24.5
HanXRQChr05g0140231 Helianthus annuus HOM05D006756 ORTHO05D001869 3.1e-12 78.2 149 36.9
ATR1120G177 Amborella trichopoda HOM05D006756 ORTHO05D001869 9.0e-12 76.6 491 25.5
Gohir.D05G016600 Gossypium hirsutum HOM05D006756 ORTHO05D001869 2.0e-11 75.5 90 45.6
Duzib187G1404 Durio zibethinus HOM05D006756 ORTHO05D001869 3.2e-09 68.2 119 38.7
MBI11_g01313_MAGBIO Magnolia biondii HOM05D003044 ORTHO05D001869 6.0e-08 63.9 486 21.2
GSVIVG01034601001 Vitis vinifera HOM05D003044 ORTHO05D001869 2.3e-07 62.0 487 23.8
ClCG08G008450 Citrullus lanatus HOM05D003044 ORTHO05D001869 8.7e-07 60.1 535 24.1
MD07G1063100 Malus domestica HOM05D003044 ORTHO05D001869 1.1e-06 59.7 475 23.8
PSO339G5639 Papaver somniferum HOM05D003044 ORTHO05D001869 2.5e-06 58.5 414 25.4


User provided reference genes

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