Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.7e-132 475.7 315 100.0
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.3e-99 366.3 304 80.6
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 1.9e-72 276.9 297 69.7
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 2.3e-54 216.9 299 70.9
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 6.3e-44 182.2 318 51.9
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 1.0e-41 174.9 313 50.5
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 2.2e-41 173.7 320 48.1
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 3.2e-40 169.9 322 54.0
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 5.5e-40 169.1 320 55.9
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 7.2e-40 168.7 244 69.7
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 2.7e-39 166.8 317 54.6
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 4.6e-39 166.0 320 50.6
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 7.9e-39 165.2 302 48.7
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 1.4e-38 164.5 314 48.7
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 3.9e-38 162.9 321 48.3
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 1.5e-37 161.0 316 49.4
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 2.5e-37 160.2 322 37.3
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.5e-37 160.2 323 47.7
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.5e-37 160.2 320 48.8
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 2.5e-37 160.2 320 48.8
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 5.7e-37 159.1 323 48.6
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 2.8e-36 156.8 326 46.0
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.7e-36 156.4 319 48.3
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 4.8e-36 156.0 316 48.4
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 4.8e-36 156.0 279 45.2
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 1.1e-35 154.8 321 49.5
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.4e-35 154.5 323 38.7
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 1.3e-33 147.9 323 51.7
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 1.3e-33 147.9 314 51.9
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 1.7e-33 147.5 292 50.3
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 1.4e-32 144.4 324 51.5
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 2.5e-32 143.7 281 44.5
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.5e-32 143.7 317 39.7
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 3.2e-32 143.3 319 45.8
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 4.2e-32 142.9 298 54.0
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.2e-31 141.4 311 53.7
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 2.1e-31 140.6 322 50.6
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 2.7e-31 140.2 311 54.0
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 2.7e-31 140.2 311 54.0
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.6e-31 139.8 309 52.4
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 7.9e-31 138.7 311 53.1
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 1.4e-30 137.9 325 44.9
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 3.0e-30 136.7 312 41.7
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 5.1e-30 136.0 254 39.8
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 8.8e-30 135.2 300 48.3
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 8.8e-30 135.2 280 43.9
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.1e-29 134.8 325 49.8
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.5e-29 134.4 300 48.7
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 2.6e-29 133.7 321 48.9
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 4.4e-29 132.9 332 48.5
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 7.4e-29 132.1 311 52.7
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 1.1e-27 128.3 330 48.5
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 1.4e-27 127.9 307 46.9
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 3.1e-27 126.7 311 50.5
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 3.1e-27 126.7 303 45.9
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 9.1e-27 125.2 313 50.2
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 4.5e-26 122.9 314 45.5
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 4.5e-26 122.9 297 47.1
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 5.9e-26 122.5 253 38.7
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 7.7e-26 122.1 304 44.1
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 7.7e-26 122.1 337 44.2
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.9e-25 120.2 295 47.8
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 5.0e-25 119.4 317 44.5
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 8.5e-25 118.6 309 46.0
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.1e-24 118.2 315 38.1
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 1.9e-24 117.5 304 39.8
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 2.5e-24 117.1 283 42.8
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 2.5e-24 117.1 283 42.8
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 5.5e-24 115.9 310 48.1
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 2.1e-23 114.0 286 46.2
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.7e-23 113.6 308 48.1
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 2.7e-23 113.6 310 43.9
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 8.0e-23 112.1 322 34.8
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 2.3e-22 110.5 302 44.4
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 2.3e-22 110.5 302 44.4
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 3.9e-22 109.8 333 31.8
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 5.2e-22 109.4 305 49.2
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 3.3e-21 106.7 305 38.4
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 3.3e-21 106.7 333 32.4
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 5.7e-21 105.9 315 40.0
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 5.7e-21 105.9 325 33.2
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 5.7e-21 105.9 293 33.4
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 9.7e-21 105.1 314 43.6
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 9.7e-21 105.1 314 43.6
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 9.7e-21 105.1 314 43.6
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 1.3e-20 104.8 315 32.1
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 1.3e-20 104.8 291 48.8
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 1.7e-20 104.4 329 33.1
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 1.7e-20 104.4 243 48.6
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 3.7e-20 103.2 306 33.3
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 6.3e-20 102.4 288 43.4
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 1.1e-19 101.7 317 42.9
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.1e-19 101.7 314 41.1
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.1e-19 101.7 280 43.9
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.1e-19 101.7 280 42.1
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 1.8e-19 100.9 312 42.9
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 3.1e-19 100.1 312 41.3
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 4.1e-19 99.8 209 41.1
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 7.0e-19 99.0 314 42.4
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 7.0e-19 99.0 314 41.4
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 7.0e-19 99.0 314 42.4
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.2e-18 98.2 226 49.6
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 1.2e-18 98.2 315 43.2
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 1.2e-18 98.2 301 44.9
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 2.0e-18 97.4 351 45.0
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 4.5e-18 96.3 309 37.5
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 4.5e-18 96.3 304 32.9
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 5.9e-18 95.9 314 41.1
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 5.9e-18 95.9 277 45.1
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 7.7e-18 95.5 321 40.8
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 7.7e-18 95.5 346 39.0
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 1.0e-17 95.1 315 41.3
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 2.9e-17 93.6 315 40.6
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 3.8e-17 93.2 315 40.6
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 3.8e-17 93.2 315 40.3
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 3.8e-17 93.2 321 40.5
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 6.5e-17 92.4 307 32.2
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 6.5e-17 92.4 312 44.2
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 8.5e-17 92.0 300 40.7
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 1.1e-16 91.7 315 40.3
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.9e-16 90.9 219 53.0
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 1.9e-16 90.9 322 33.5
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 2.5e-16 90.5 347 44.4
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 2.5e-16 90.5 311 41.2
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 5.5e-16 89.4 352 38.4
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 9.4e-16 88.6 279 47.7
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 3.0e-14 83.6 294 34.4
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 5.2e-14 82.8 292 39.0
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 4.4e-13 79.7 301 34.9
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 9.7e-13 78.6 314 39.2
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 1.7e-12 77.8 300 31.7
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 4.8e-12 76.3 325 29.8
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 8.2e-12 75.5 138 41.3
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 1.1e-11 75.1 307 38.1
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 3.1e-11 73.6 297 35.0
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 4.1e-11 73.2 315 31.1
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.7e-09 67.8 293 40.3
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 2.2e-09 67.4 220 43.6
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 8.5e-09 65.5 310 39.0
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 1.2e-07 61.6 203 43.8
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 1.6e-07 61.2 322 33.2
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 1.8e-06 57.8 324 26.9
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 5.2e-06 56.2 300 28.0


User provided reference genes

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