Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.7e-126 456.1 240 100.0
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.6e-119 432.2 240 95.8
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 3.9e-86 322.0 358 56.7
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 2.8e-84 315.8 315 61.6
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 7.5e-82 307.8 345 56.5
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 6.4e-73 278.1 284 59.2
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 3.9e-70 268.9 320 53.1
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 5.2e-67 258.5 336 50.0
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 5.8e-66 255.0 354 48.6
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 2.1e-63 246.5 352 46.9
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 2.7e-63 246.1 331 47.4
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 7.8e-63 244.6 342 46.8
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 1.3e-62 243.8 299 52.5
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 3.9e-62 242.3 348 47.4
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 1.1e-61 240.7 326 50.0
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.9e-61 240.0 333 47.7
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 2.5e-61 239.6 340 46.8
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 3.3e-61 239.2 381 43.8
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 7.3e-61 238.0 354 45.8
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 9.6e-61 237.7 317 48.3
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 1.2e-60 237.3 341 46.0
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.6e-60 236.9 315 48.9
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.8e-60 236.1 370 43.5
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 8.1e-60 234.6 365 44.4
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 1.5e-58 230.3 361 43.5
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 2.6e-58 229.6 354 44.6
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 3.4e-58 229.2 332 46.4
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 3.4e-58 229.2 340 46.5
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 4.4e-58 228.8 363 44.4
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 7.6e-58 228.0 350 44.3
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.3e-57 227.3 366 42.9
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.3e-57 227.3 348 45.7
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 6.4e-57 224.9 346 46.0
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 2.4e-56 223.0 340 44.4
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 2.4e-56 223.0 336 45.2
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 2.4e-56 223.0 344 44.5
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 7.1e-56 221.5 343 45.8
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.2e-55 220.7 303 48.5
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.2e-55 220.7 343 45.8
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 2.1e-55 219.9 348 44.5
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 2.1e-55 219.9 351 44.7
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 2.7e-55 219.5 364 42.3
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 3.5e-55 219.2 325 45.2
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.6e-55 218.8 345 45.5
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 4.6e-55 218.8 348 44.3
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 4.6e-55 218.8 331 44.7
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 1.0e-54 217.6 333 45.6
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.3e-54 217.2 346 42.8
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 1.3e-54 217.2 346 42.8
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 2.3e-54 216.5 316 46.5
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 2.3e-54 216.5 316 46.5
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.3e-54 216.5 349 44.1
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 3.9e-54 215.7 313 47.3
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 5.1e-54 215.3 345 44.3
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 6.6e-54 214.9 365 42.7
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 1.1e-53 214.2 319 46.1
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 1.5e-53 213.8 356 42.7
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 5.6e-53 211.8 377 41.9
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 1.6e-52 210.3 324 44.8
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 3.6e-52 209.1 351 42.2
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 1.4e-51 207.2 362 41.7
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 3.1e-51 206.1 365 42.5
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 4.0e-51 205.7 356 41.9
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 5.3e-51 205.3 330 43.9
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 1.5e-50 203.8 368 41.0
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 3.4e-50 202.6 316 45.9
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 3.4e-50 202.6 343 42.3
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 4.5e-50 202.2 358 42.2
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 7.6e-50 201.4 335 43.6
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 1.3e-49 200.7 373 39.1
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.3e-49 200.7 331 43.8
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 1.7e-49 200.3 337 42.4
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 1.7e-49 200.3 313 45.4
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 1.1e-48 197.6 343 42.0
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 1.4e-48 197.2 366 41.5
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 2.4e-48 196.4 341 41.6
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 7.1e-48 194.9 285 47.4
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 3.5e-47 192.6 330 42.1
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.0e-46 191.0 378 38.4
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 3.0e-46 189.5 379 38.3
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 1.5e-45 187.2 327 41.3
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 1.6e-44 183.7 309 42.4
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 6.2e-44 181.8 387 34.6
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 1.1e-43 181.0 305 44.3
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.4e-43 180.6 394 35.8
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 1.8e-43 180.3 365 38.9
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 4.9e-41 172.2 149 62.4
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 1.4e-40 170.6 316 41.1
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 2.4e-40 169.9 156 59.6
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 2.3e-38 163.3 285 40.7
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 2.3e-38 163.3 348 36.8
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 3.0e-38 162.9 393 33.3
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 1.5e-34 150.6 92 83.7
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 3.4e-34 149.4 123 61.8
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 3.8e-33 146.0 384 34.1
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 4.2e-32 142.5 270 41.1
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 4.2e-32 142.5 121 62.0
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 1.6e-31 140.6 183 47.5
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.1e-29 134.4 145 53.8
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 3.3e-29 132.9 111 59.5
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 1.4e-24 117.5 138 52.2
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 4.2e-24 115.9 92 71.7
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 2.7e-23 113.2 190 37.4
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 6.1e-23 112.1 195 39.0
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 6.1e-23 112.1 284 35.2
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 8.7e-22 108.2 255 37.3
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 1.1e-21 107.8 97 55.7
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 4.3e-21 105.9 288 35.8
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 3.7e-20 102.8 89 57.3
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.8e-19 100.5 77 75.3
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 1.8e-19 100.5 164 40.2
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 3.1e-19 99.8 119 58.0
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 1.2e-18 97.8 106 50.9
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.3e-17 94.4 96 50.0
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.3e-17 94.4 75 72.0
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 1.7e-17 94.0 147 38.8
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.4e-14 84.3 115 45.2
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 7.4e-13 78.6 102 46.1
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-12 77.8 112 42.9
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.2e-12 77.0 101 43.6
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.8e-12 75.9 75 54.7
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 6.3e-12 75.5 101 42.6
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 9.1e-11 71.6 75 52.0
Oeu042970.1 Olea europaea HOM05D006566 ORTHO05D004366 2.0e-10 70.5 88 48.9
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 3.4e-10 69.7 68 54.4
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 4.5e-10 69.3 112 40.2
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 3.8e-09 66.2 102 43.1
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 6.5e-09 65.5 102 42.2
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 6.5e-09 65.5 102 42.2
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 8.5e-09 65.1 102 42.2
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-08 64.7 100 42.0
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.9e-08 63.9 102 41.2
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 2.5e-08 63.5 102 40.2
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 2.5e-08 63.5 40 70.0
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.2e-08 63.2 102 40.2
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.2e-08 62.8 102 41.2
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 4.2e-08 62.8 102 41.2
arahy.Tifrunner.gnm1.ann1.8PL5QC Arachis hypogaea HOM05D008215 ORTHO05D004366 7.2e-08 62.0 102 39.2
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 1.2e-07 61.2 102 39.2
arahy.Tifrunner.gnm1.ann1.8K6P1P Arachis hypogaea HOM05D008215 ORTHO05D004366 1.6e-07 60.8 91 41.8
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 1.6e-07 60.8 102 39.2
arahy.Tifrunner.gnm1.ann1.15M8G9 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-07 60.5 102 39.2
arahy.Tifrunner.gnm1.ann1.N5TKCQ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.0e-06 58.2 111 36.9
arahy.Tifrunner.gnm1.ann1.0B2DCJ Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-06 55.5 56 53.6


User provided reference genes

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