Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.1e-196 688.7 320 100.0
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 7.5e-186 653.7 320 94.1
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.2e-172 609.8 320 87.5
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 7.5e-162 573.9 320 80.6
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 4.9e-161 571.2 316 81.6
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 8.3e-161 570.5 320 80.3
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 7.0e-160 567.4 317 81.4
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 1.9e-157 559.3 317 80.4
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 2.5e-157 558.9 317 80.1
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 2.8e-156 555.4 317 79.8
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 3.7e-153 545.0 320 75.9
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.9e-152 542.7 318 76.1
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 4.1e-152 541.6 320 76.2
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 1.7e-150 536.2 317 74.1
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 4.3e-149 531.6 317 74.1
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 9.5e-149 530.4 318 73.0
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 2.8e-148 528.9 318 74.2
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 3.6e-148 528.5 318 74.2
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.2e-146 523.5 318 72.3
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.2e-146 523.5 318 74.5
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 5.8e-146 521.2 318 74.5
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 7.5e-146 520.8 319 73.4
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 7.5e-146 520.8 318 73.6
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 9.8e-146 520.4 318 73.0
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.7e-145 519.6 318 71.4
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 2.9e-145 518.8 321 72.6
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 2.9e-145 518.8 318 73.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 4.9e-145 518.1 318 70.8
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 8.3e-145 517.3 318 73.0
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.4e-144 516.5 318 72.3
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.4e-144 516.5 311 74.0
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 4.1e-144 515.0 318 72.6
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 5.4e-144 514.6 318 73.0
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 7.1e-144 514.2 318 72.6
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 7.1e-144 514.2 318 72.6
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 1.2e-143 513.5 318 72.0
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.6e-143 513.1 318 72.3
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 2.7e-143 512.3 318 71.4
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 3.5e-143 511.9 319 71.2
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.5e-143 511.9 317 71.0
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 4.6e-143 511.5 319 72.7
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 6.0e-143 511.1 318 72.3
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 6.0e-143 511.1 319 71.2
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.3e-142 510.0 319 70.8
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.7e-142 509.6 318 72.0
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.7e-142 509.6 318 72.0
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 2.3e-142 509.2 318 70.1
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.0e-142 508.8 317 71.6
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 3.0e-142 508.8 317 71.6
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 3.0e-142 508.8 318 72.0
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 6.6e-142 507.7 319 69.9
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 8.6e-142 507.3 318 70.8
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.1e-141 506.9 318 71.7
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 1.9e-141 506.1 321 70.7
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.5e-141 503.8 310 71.0
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.2e-140 503.4 319 70.8
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 2.8e-140 502.3 318 70.1
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.8e-140 502.3 317 70.0
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 4.7e-140 501.5 321 69.8
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 6.2e-140 501.1 314 72.0
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 8.1e-140 500.7 319 70.8
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.1e-140 500.7 317 71.0
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 8.1e-140 500.7 320 70.0
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 4.0e-139 498.4 320 70.9
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 8.9e-139 497.3 318 71.7
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 1.5e-138 496.5 319 70.5
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 1.5e-138 496.5 319 71.5
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.5e-138 496.5 308 71.8
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 1.5e-138 496.5 318 69.5
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.0e-138 496.1 305 72.5
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.4e-138 495.4 320 70.6
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 7.6e-138 494.2 319 70.2
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 1.7e-137 493.0 318 71.1
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.2e-137 492.7 319 68.3
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 3.8e-137 491.9 315 69.5
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.1e-136 490.3 317 71.0
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.4e-136 490.0 319 70.2
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 1.4e-136 490.0 317 70.0
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 1.9e-136 489.6 313 69.0
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 3.2e-136 488.8 305 71.8
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 5.4e-136 488.0 320 70.9
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 9.2e-136 487.3 319 69.0
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.6e-135 486.5 319 67.4
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 2.1e-135 486.1 319 67.1
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 2.1e-135 486.1 314 69.1
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 6.0e-135 484.6 305 71.5
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 6.0e-135 484.6 315 69.5
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 7.8e-135 484.2 306 69.6
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 7.8e-135 484.2 321 69.5
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.3e-134 483.4 317 67.8
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 2.3e-134 482.6 306 69.3
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 3.0e-134 482.3 304 71.1
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.0e-134 482.3 318 65.7
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 3.9e-134 481.9 306 70.3
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 3.9e-134 481.9 318 69.8
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.9e-134 481.9 294 71.4
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 8.6e-134 480.7 318 68.9
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.1e-133 480.3 321 67.0
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.3e-133 478.4 313 67.1
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.6e-133 478.0 304 70.7
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 5.6e-133 478.0 306 69.0
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 7.3e-133 477.6 306 69.0
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.2e-132 476.9 306 69.0
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 1.2e-132 476.9 321 67.3
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 1.6e-132 476.5 306 69.6
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.6e-132 476.5 313 67.4
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 2.8e-132 475.7 304 70.1
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 2.8e-132 475.7 304 70.4
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 4.7e-132 474.9 313 67.1
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 6.2e-132 474.6 306 69.0
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 1.1e-131 473.8 318 64.8
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.8e-131 473.0 317 66.6
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 1.2e-130 470.3 318 64.5
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 2.0e-130 469.5 304 64.8
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.0e-130 469.5 309 68.3
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 2.6e-130 469.2 306 68.0
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 3.8e-129 465.3 318 66.0
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 1.3e-126 456.8 320 67.2
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 8.7e-126 454.1 288 70.8
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.9e-125 453.0 288 69.1
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.6e-125 451.4 288 70.5
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 9.6e-125 450.7 318 64.2
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 3.6e-124 448.7 318 65.1
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 5.3e-123 444.9 304 66.8
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 3.9e-118 428.7 293 66.6
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.9e-117 426.4 321 62.6
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 5.6e-117 424.9 312 59.9
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 9.6e-117 424.1 270 68.9
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.8e-116 422.5 310 59.4
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.1e-115 420.6 318 60.4
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 9.9e-114 414.1 317 59.9
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.5e-109 400.2 310 56.5
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 7.6e-106 387.9 309 54.4
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 2.9e-105 386.0 300 62.0
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.2e-104 382.1 312 57.4
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.5e-101 372.9 321 55.8
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 2.5e-101 372.9 321 55.8
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 4.5e-98 362.1 216 72.7
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 5.9e-98 361.7 305 53.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 2.7e-95 352.8 224 68.8
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 2.5e-93 346.3 311 52.4
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 5.9e-90 335.1 309 50.8
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.2e-80 302.4 269 55.0
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.2e-71 274.2 305 47.2
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.3e-68 264.2 181 66.9
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.6e-63 247.3 266 46.6
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 4.3e-48 196.1 134 68.7
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 9.8e-45 184.9 126 63.5
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 5.0e-41 172.6 318 33.3
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.6e-41 172.2 117 65.8
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 5.8e-37 159.1 302 31.8
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 9.9e-29 131.7 245 33.9
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 9.9e-29 131.7 352 27.6
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.0e-25 121.7 99 53.5
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 4.7e-15 86.3 61 65.6
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 9.0e-14 82.0 75 53.3


User provided reference genes

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