Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 3.2e-150 535.0 268 100.0
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 6.6e-119 431.0 268 85.1
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 2.0e-115 419.5 268 81.7
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 9.5e-110 400.6 268 79.1
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 2.8e-109 399.1 268 78.4
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 1.9e-102 376.3 269 76.2
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 3.3e-102 375.6 291 70.1
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 3.1e-84 315.8 213 74.6
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 3.1e-84 315.8 213 74.6
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 2.0e-83 313.2 213 74.2
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 2.2e-82 309.7 225 70.2
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 4.9e-82 308.5 242 65.7
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 2.7e-80 302.8 220 71.4
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 3.5e-80 302.4 212 72.2
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 4.6e-80 302.0 210 71.0
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 7.9e-80 301.2 235 66.0
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 1.3e-79 300.4 213 71.8
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 6.7e-79 298.1 216 70.4
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 1.5e-78 297.0 269 59.5
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 1.9e-78 296.6 257 62.6
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 7.4e-78 294.7 251 63.7
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 9.6e-78 294.3 222 69.4
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 9.6e-78 294.3 217 68.2
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 2.8e-77 292.7 217 67.7
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 2.8e-77 292.7 215 68.4
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 4.8e-77 292.0 217 67.7
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 6.2e-77 291.6 211 69.7
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 8.1e-77 291.2 244 63.9
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 8.1e-77 291.2 218 68.8
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 1.1e-76 290.8 253 60.9
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 2.4e-76 289.7 212 69.8
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 4.0e-76 288.9 223 66.4
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 6.9e-76 288.1 244 62.3
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 6.9e-76 288.1 210 67.6
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 9.0e-76 287.7 199 71.9
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 9.0e-76 287.7 226 62.8
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 9.0e-76 287.7 249 61.4
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 2.0e-75 286.6 209 68.4
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 2.6e-75 286.2 225 65.3
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 3.4e-75 285.8 236 64.0
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 5.8e-75 285.0 230 63.9
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 9.9e-75 284.3 210 68.1
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 2.9e-74 282.7 228 64.0
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 4.9e-74 282.0 244 61.9
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 6.4e-74 281.6 213 68.1
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 1.1e-73 280.8 228 63.2
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 1.1e-73 280.8 231 63.6
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 1.1e-73 280.8 223 65.5
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 1.4e-73 280.4 244 59.0
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 2.5e-73 279.6 228 62.3
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 3.2e-73 279.3 249 60.6
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 4.2e-73 278.9 222 64.4
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 4.2e-73 278.9 248 60.9
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 5.5e-73 278.5 226 60.6
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 5.5e-73 278.5 255 59.6
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 5.5e-73 278.5 211 66.4
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 5.5e-73 278.5 228 62.7
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 9.3e-73 277.7 228 61.8
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 2.1e-72 276.6 213 65.3
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 2.7e-72 276.2 258 59.7
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 4.6e-72 275.4 262 55.0
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 4.6e-72 275.4 262 55.0
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 4.6e-72 275.4 262 55.0
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 1.3e-71 273.9 195 68.7
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 1.8e-71 273.5 244 57.8
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 1.8e-71 273.5 244 57.8
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 3.9e-71 272.3 224 59.8
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 6.7e-71 271.6 229 61.6
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 6.7e-71 271.6 247 59.5
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 1.1e-70 270.8 245 56.7
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 1.1e-70 270.8 200 64.5
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 1.1e-70 270.8 245 56.7
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 1.1e-70 270.8 226 61.1
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 1.1e-70 270.8 211 64.0
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 1.5e-70 270.4 200 64.5
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 1.5e-70 270.4 261 54.0
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 1.9e-70 270.0 199 64.8
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 1.9e-70 270.0 186 69.4
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 9.6e-70 267.7 228 59.2
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 9.6e-70 267.7 249 58.2
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 9.6e-70 267.7 257 57.2
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 2.1e-69 266.5 258 54.7
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 2.8e-69 266.2 242 59.1
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 2.8e-69 266.2 214 63.1
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 3.7e-69 265.8 258 59.7
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 8.2e-69 264.6 234 56.4
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 2.4e-68 263.1 234 56.4
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 3.1e-68 262.7 249 57.4
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 5.3e-68 261.9 261 51.7
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 5.3e-68 261.9 227 59.0
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 9.0e-68 261.2 179 70.9
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 9.0e-68 261.2 228 61.4
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 2.0e-67 260.0 256 52.7
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 7.9e-64 248.1 203 60.1
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 3.0e-63 246.1 235 57.9
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 1.1e-60 237.7 207 58.5
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 1.8e-60 236.9 237 56.5
Lj7A749G60 Lonicera japonica HOM05D006422 ORTHO05D007992 2.1e-56 223.4 122 84.4
CiPaw.08G017800 Carya illinoinensis HOM05D006422 ORTHO05D007992 1.7e-53 213.8 212 58.0
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 2.2e-53 213.4 207 51.2
Ah.11g043920 Amaranthus hybridus HOM05D006422 ORTHO05D007992 2.6e-51 206.5 219 52.5
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.2e-49 199.5 206 52.4
AagrBONN_evm.TU.Sc2ySwM_228.4709 Anthoceros agrestis HOM05D006422 ORTHO05D007992 2.1e-48 196.8 187 48.1
SMO364G0843 Selaginella moellendorffii HOM05D006422 ORTHO05D007992 2.3e-47 193.4 187 50.8
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 3.0e-47 193.0 194 45.4
Gorai.002G101300 Gossypium raimondii HOM05D006422 ORTHO05D007992 8.8e-47 191.4 112 80.4
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.5e-46 190.7 164 62.8
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 1.5e-46 190.7 228 43.4
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 3.7e-45 186.0 208 51.9
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 4.8e-45 185.7 160 63.1
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 3.1e-44 183.0 144 66.0
CSS0035518 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 1.1e-33 147.9 148 56.1
Oeu014126.1 Olea europaea HOM05D006422 ORTHO05D007992 1.1e-33 147.9 94 77.7
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 2.7e-27 126.7 196 34.2
Cre12.g502250 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 1.1e-20 104.8 262 30.9
MCO15G093 Micromonas commoda HOM05D006422 ORTHO05D007992 5.0e-18 95.9 226 30.5
Hund19396 Selenicereus undatus HOM05D006422 ORTHO05D007992 1.5e-17 94.4 105 55.2
PRCOL_00004658 Prasinoderma coloniale HOM05D006422 ORTHO05D007992 6.8e-15 85.5 130 38.5
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 4.5e-11 72.8 250 23.6
vmacro01768 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 4.3e-09 66.2 252 24.2
Lj9A307T41 Lonicera japonica HOM05D003483 ORTHO05D004101 2.1e-08 63.9 250 24.4
GSVIVG01022995001 Vitis vinifera HOM05D003483 ORTHO05D004101 6.1e-08 62.4 214 24.3
Thecc.02G039800 Theobroma cacao HOM05D003483 ORTHO05D004101 8.0e-08 62.0 233 24.5
CDE02G1133 Ceratophyllum demersum HOM05D003483 ORTHO05D004101 2.3e-07 60.5 262 24.0
PGR142G1721 Punica granatum HOM05D003483 ORTHO05D004101 3.1e-07 60.1 216 23.6
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 1.2e-06 58.2 281 23.8
HanXRQChr03g0066831 Helianthus annuus HOM05D003483 ORTHO05D004101 2.0e-06 57.4 203 21.7
Sabra01G0161900 Salix brachista HOM05D003483 ORTHO05D004101 2.0e-06 57.4 238 26.1
Dinv19357 Davidia involucrata HOM05D003483 ORTHO05D004101 3.4e-06 56.6 236 21.2
Potri.001G209600 Populus trichocarpa HOM05D003483 ORTHO05D004101 4.4e-06 56.2 238 25.2
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 7.5e-06 55.5 275 22.5
Sp2g15270 Schrenkiella parvula HOM05D003483 ORTHO05D004101 9.8e-06 55.1 231 22.5


User provided reference genes

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