Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000023g0160 Nicotiana tabacum HOM05D000001 ORTHO05D000424 7.1e-29 129.8 61 100.0
Nitab4.5_0000023g0130 Nicotiana tabacum HOM05D000001 ORTHO05D000424 6.1e-12 73.6 36 94.4
Nitab4.5_0003069g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000424 6.1e-12 73.6 36 94.4
Nitab4.5_0004431g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000424 1.8e-11 72.0 36 91.7
Nitab4.5_0005032g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000424 1.8e-11 72.0 36 91.7
Peaxi162Scf00268g01015 Petunia axillaris HOM05D000001 ORTHO05D000424 1.8e-11 72.0 36 91.7
Nitab4.5_0002300g0030 Nicotiana tabacum HOM05D000001 ORTHO05D000424 5.1e-11 70.5 36 91.7
Nitab4.5_0004431g0050 Nicotiana tabacum HOM05D000001 ORTHO05D000424 6.7e-11 70.1 36 88.9
Peaxi162Scf00078g00839 Petunia axillaris HOM05D000001 ORTHO05D000424 2.0e-10 68.6 36 86.1
Nitab4.5_0016366g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000424 2.6e-10 68.2 36 83.3
CAN.G1024.8 Capsicum annuum HOM05D000001 ORTHO05D000424 3.3e-10 67.8 37 83.8
CAN.G512.1 Capsicum annuum HOM05D000001 ORTHO05D000424 3.3e-10 67.8 37 83.8
CAN.G512.2 Capsicum annuum HOM05D000001 ORTHO05D000424 3.3e-10 67.8 37 83.8
CAN.G512.7 Capsicum annuum HOM05D000001 ORTHO05D000424 3.3e-10 67.8 37 83.8
Peaxi162Scf00970g00169 Petunia axillaris HOM05D000001 ORTHO05D000424 3.3e-10 67.8 36 83.3
Peaxi162Scf00276g00131 Petunia axillaris HOM05D000001 ORTHO05D000424 7.4e-10 66.6 36 86.1
PGSC0003DMG400015357 Solanum tuberosum HOM05D000001 ORTHO05D000424 9.7e-10 66.2 37 81.1
CAN.G14.49 Capsicum annuum HOM05D000001 ORTHO05D000424 1.3e-09 65.9 36 83.3
Solyc02g063373.1 Solanum lycopersicum HOM05D000001 ORTHO05D000424 1.7e-09 65.5 37 81.1
Solyc02g063377.1 Solanum lycopersicum HOM05D000001 ORTHO05D000424 1.7e-09 65.5 37 81.1
Sopen02g014460 Solanum pennellii HOM05D000001 ORTHO05D000424 1.7e-09 65.5 37 81.1
Peaxi162Scf00818g00048 Petunia axillaris HOM05D000001 ORTHO05D000424 2.2e-09 65.1 36 83.3
Solyc06g064520.4 Solanum lycopersicum HOM05D000001 ORTHO05D000424 6.3e-09 63.5 36 75.0
Sopen06g022990 Solanum pennellii HOM05D000001 ORTHO05D000424 6.3e-09 63.5 36 75.0
PGSC0003DMG400033125 Solanum tuberosum HOM05D000001 ORTHO05D000424 6.3e-09 63.5 36 75.0
Peaxi162Scf00818g00045 Petunia axillaris HOM05D000001 ORTHO05D000424 2.4e-08 61.6 36 77.8
Solyc06g150126.1 Solanum lycopersicum HOM05D000001 ORTHO05D000424 3.1e-08 61.2 36 75.0
Sopen06g023000 Solanum pennellii HOM05D000001 ORTHO05D000424 3.1e-08 61.2 36 75.0
Sopen06g023020 Solanum pennellii HOM05D000001 ORTHO05D000424 3.1e-08 61.2 36 75.0
CAN.G14.52 Capsicum annuum HOM05D000001 ORTHO05D000424 4.1e-08 60.8 36 75.0
Nitab4.5_0001430g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000424 4.1e-08 60.8 36 77.8
Nitab4.5_0014837g0010 Nicotiana tabacum HOM05D000001 ORTHO05D000424 4.1e-08 60.8 36 77.8
CAN.G14.50 Capsicum annuum HOM05D000001 ORTHO05D000424 6.9e-08 60.1 36 75.0
CAN.G14.51 Capsicum annuum HOM05D000001 ORTHO05D000424 6.9e-08 60.1 36 75.0
Nitab4.5_0003200g0100 Nicotiana tabacum HOM05D000001 ORTHO05D000424 6.9e-08 60.1 36 72.2
Nitab4.5_0007725g0020 Nicotiana tabacum HOM05D000001 ORTHO05D000424 6.9e-08 60.1 36 72.2
Cc00_g23450 Coffea canephora HOM05D000001 ORTHO05D000424 1.2e-07 59.3 36 69.4
Cc00_g30210 Coffea canephora HOM05D000001 ORTHO05D000424 1.2e-07 59.3 36 69.4
Cc01_g03410 Coffea canephora HOM05D000001 ORTHO05D000424 1.2e-07 59.3 36 69.4
Solyc12g013670.2 Solanum lycopersicum HOM05D000001 ORTHO05D000424 1.5e-07 58.9 36 77.8
Solyc12g013770.3 Solanum lycopersicum HOM05D000001 ORTHO05D000424 1.5e-07 58.9 36 77.8
Solyc06g064537.1 Solanum lycopersicum HOM05D000001 ORTHO05D000424 2.0e-07 58.5 36 72.2
Migut.C01388 Erythranthe guttata HOM05D000001 ORTHO05D000424 3.4e-07 57.8 36 75.0
Oeu020999.1 Olea europaea HOM05D000001 ORTHO05D000424 4.5e-07 57.4 36 72.2
GSVIVG01037215001 Vitis vinifera HOM05D000001 ORTHO05D000424 1.3e-06 55.8 37 64.9
Oeu035046.1 Olea europaea HOM05D000001 ORTHO05D000424 2.2e-06 55.1 36 69.4
GSVIVG01037216001 Vitis vinifera HOM05D000001 ORTHO05D000424 3.8e-06 54.3 37 62.2
Dinv22116 Davidia involucrata HOM05D000001 ORTHO05D000424 5.0e-06 53.9 37 62.2
Hma1.2p1_0016F.1_g010840 Hydrangea macrophylla HOM05D000001 ORTHO05D000424 5.0e-06 53.9 34 70.6
Nitab4.5_0002300g0050 Nicotiana tabacum HOM05D000001 ORTHO05D000424 5.0e-06 53.9 36 77.8
SGA_v2.0_scaffold118G32623 Striga asiatica HOM05D000001 ORTHO05D000424 5.0e-06 53.9 36 69.4
ClCG08G000790 Citrullus lanatus HOM05D000001 ORTHO05D000424 6.5e-06 53.5 37 67.6
MELO3C022162.2 Cucumis melo HOM05D000001 ORTHO05D000424 6.5e-06 53.5 37 67.6
GSVIVG01037214001 Vitis vinifera HOM05D000001 ORTHO05D000424 6.5e-06 53.5 37 59.5
SalBow7G3056 Salvia bowleyana HOM05D000001 ORTHO05D000424 8.5e-06 53.1 36 72.2


User provided reference genes

Program Settings