Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-171 605.9 316 100.0
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.5e-103 379.0 360 63.3
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-101 371.7 378 60.3
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.6e-100 370.2 364 63.5
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.9e-90 334.3 335 61.8
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-88 330.9 376 57.2
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-86 323.9 367 57.5
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-81 305.1 335 58.5
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-77 293.9 358 53.1
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-75 286.6 322 57.5
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-74 282.7 336 56.5
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-72 275.0 319 56.1
Nitab4.5_0001599g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-65 251.9 309 56.0
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-63 245.4 329 52.6
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-59 233.0 291 53.3
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-58 231.1 291 52.2
Nitab4.5_0000059g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-57 227.3 229 60.3
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.1e-55 218.8 351 47.0
Nitab4.5_0000936g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-54 214.9 265 52.5
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-53 213.8 242 59.1
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-52 211.1 308 46.8
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-51 207.6 250 54.8
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-49 200.3 259 54.1
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-37 159.5 217 48.8
Nitab4.5_0001215g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.7e-37 158.3 220 50.5
Nitab4.5_0001599g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-35 153.7 116 68.1
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-33 147.9 121 71.9
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.4e-32 141.7 119 70.6
Nitab4.5_0000141g0150 Nicotiana tabacum HOM05D003911 ORTHO05D282306 6.1e-31 139.0 149 59.7
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 6.1e-23 112.5 215 41.9
Nitab4.5_0000079g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-22 110.2 90 72.2
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-21 107.5 319 35.1
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-21 106.3 365 31.5
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-20 103.2 341 33.7
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-18 97.8 338 33.4
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-17 93.6 295 33.2
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-17 93.2 341 32.8
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-16 90.5 346 29.8
Nitab4.5_0000913g0150 Nicotiana tabacum HOM05D003911 ORTHO05D284303 1.6e-15 87.8 71 69.0
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-15 87.0 386 30.6
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-15 87.0 338 32.2
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-15 85.5 274 31.4
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-14 82.4 336 30.4
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.8e-14 82.4 183 33.9
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.8e-14 82.0 164 39.0
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-13 79.7 157 36.9
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 7.5e-13 79.0 384 27.9
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-11 75.1 341 29.0
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-11 74.7 225 33.3
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-11 74.3 217 31.8
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-11 73.9 329 29.2
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-11 73.9 158 36.1
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-11 73.6 101 43.6
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-11 72.8 268 32.5
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-11 72.8 194 34.0
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-11 72.4 383 27.2
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-10 71.6 179 36.3
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-10 71.2 273 27.5
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.6e-10 71.2 100 44.0
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-10 69.7 101 42.6
Nitab4.5_0000141g0160 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-10 69.7 94 51.1
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-09 68.6 171 37.4
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-09 68.2 208 32.2
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 2.3e-09 67.4 196 31.1
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-09 67.4 184 33.7
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-09 67.0 142 35.9
Nitab4.5_0021362g0010 Nicotiana tabacum HOM05D003911 ORTHO05D001773 2.9e-09 67.0 125 44.0
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-09 66.2 160 34.4
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.0e-09 66.2 314 27.7
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-09 65.9 72 51.4
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.6e-09 65.5 308 26.6
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.6e-09 65.5 369 24.4
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-08 65.1 126 35.7
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-08 64.7 163 33.7
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 64.3 88 40.9
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-08 64.3 52 55.8
Nitab4.5_0000003g0320 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-08 63.9 41 78.0
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-08 63.2 164 32.9
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.2e-08 63.2 332 24.4
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-08 62.4 179 32.4
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-08 62.4 98 38.8
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.5e-08 62.0 100 41.0
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 9.5e-08 62.0 366 25.7
PGSC0003DMG400043570 Solanum tuberosum HOM05D003911 ORTHO05D002175 9.5e-08 62.0 137 35.0
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-07 61.6 105 39.0
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-07 61.2 333 23.4
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-07 61.2 157 34.4
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-07 61.2 126 36.5
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.1e-07 60.8 198 29.3
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-07 60.5 355 28.5
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-07 60.5 126 33.3
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-07 60.5 209 30.1
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-07 60.1 280 26.1
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-07 60.1 236 32.2
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-07 60.1 99 44.4
PGSC0003DMG400023226 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.7e-07 59.7 160 31.2
Nitab4.5_0001742g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-07 59.3 52 53.8
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-07 58.9 108 35.2
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 1.0e-06 58.5 105 40.0
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-06 58.5 176 31.8
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-06 58.5 142 34.5
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-06 58.5 379 23.5
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.0e-06 58.5 123 36.6
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-06 58.2 126 34.9
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-06 57.8 188 30.3
Nitab4.5_0000481g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-06 57.4 77 45.5
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.3e-06 57.4 98 40.8
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-06 57.0 184 30.4
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-06 57.0 151 30.5
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.0e-06 57.0 126 35.7
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-06 56.6 89 42.7
Nitab4.5_0000903g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-06 56.6 50 52.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-06 56.6 129 34.1
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-06 56.6 292 25.3
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-06 56.2 69 47.8
Nitab4.5_0009953g0030 Nicotiana tabacum HOM05D003911 ORTHO05D010997 5.2e-06 56.2 128 40.6
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-06 55.8 177 31.6
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.8e-06 55.8 267 28.8
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.8e-06 55.8 186 31.2
Solyc02g005145.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 6.8e-06 55.8 134 34.3
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.9e-06 55.5 192 28.1
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 8.9e-06 55.5 181 29.8


User provided reference genes

Program Settings