Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 7.1e-125 450.7 236 100.0
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.5e-93 345.9 236 82.6
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 3.6e-68 262.3 241 62.7
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 1.4e-59 233.8 237 60.3
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 3.1e-56 222.6 236 56.8
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 1.2e-55 220.7 241 58.5
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.0e-27 125.9 238 39.1
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.6e-23 112.5 231 37.7
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.3e-22 110.9 223 39.5
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 2.3e-22 110.2 233 36.1
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 5.0e-22 109.0 238 39.1
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 5.0e-22 109.0 231 38.1
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 6.6e-22 108.6 239 35.1
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 6.6e-22 108.6 236 33.1
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 1.5e-21 107.5 232 36.2
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 2.5e-21 106.7 236 35.2
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.3e-21 106.3 241 35.7
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 3.3e-21 106.3 112 47.3
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 4.3e-21 105.9 234 35.9
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 9.5e-21 104.8 242 33.5
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 9.5e-21 104.8 247 32.0
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.2e-20 104.4 251 33.5
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.6e-20 104.0 228 36.4
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 1.6e-20 104.0 247 35.6
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 2.8e-20 103.2 224 41.5
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 4.7e-20 102.4 235 36.2
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 1.8e-19 100.5 233 36.5
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 3.4e-18 96.3 238 35.3
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 3.4e-18 96.3 238 35.7
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 7.5e-18 95.1 247 33.6
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 2.2e-17 93.6 245 33.5
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 2.2e-17 93.6 232 34.1
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 2.2e-17 93.6 238 31.5
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 2.9e-17 93.2 247 34.0
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 6.4e-17 92.0 234 33.8
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 8.3e-17 91.7 239 33.1
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 2.4e-16 90.1 235 34.9
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.4e-16 90.1 243 33.7
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 3.2e-16 89.7 142 40.8
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 4.1e-16 89.4 231 34.2
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.4e-16 89.0 238 34.5
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 9.2e-16 88.2 239 30.5
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 1.6e-15 87.4 220 34.1
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 2.1e-15 87.0 231 32.9
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 2.7e-15 86.7 243 34.2
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 4.6e-15 85.9 110 42.7
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 4.6e-15 85.9 239 32.2
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 4.6e-15 85.9 248 28.2
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.7e-14 84.0 242 31.8
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.7e-14 84.0 242 31.8
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.3e-14 83.6 247 32.8
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 8.6e-14 81.6 231 30.3
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 1.1e-13 81.3 232 31.0
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.9e-13 80.5 234 30.8
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.3e-13 79.3 238 31.5
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 5.6e-13 79.0 230 31.7
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 7.3e-13 78.6 239 31.4
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 1.6e-12 77.4 232 30.2
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.8e-11 73.9 238 30.7
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.8e-11 73.9 96 47.9
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 2.3e-11 73.6 233 30.9
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 8.9e-11 71.6 237 30.4
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 1.5e-10 70.9 230 30.0
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 2.6e-10 70.1 245 30.6
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 3.4e-10 69.7 232 31.9
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 9.9e-10 68.2 234 29.5
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 1.3e-09 67.8 243 28.0
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.2e-09 67.0 195 30.8
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.7e-09 66.2 241 28.6
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 4.9e-09 65.9 247 28.3
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 4.9e-09 65.9 230 28.3
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 4.9e-09 65.9 248 29.4
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 4.9e-09 65.9 116 36.2
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 6.4e-09 65.5 241 28.2
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 8.4e-09 65.1 194 32.0
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 8.4e-09 65.1 250 30.4
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 8.4e-09 65.1 242 29.8
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 1.4e-08 64.3 98 38.8
Rhsim12G0177300 Rhododendron simsii HOM05D007269 ORTHO05D008531 1.4e-08 64.3 106 40.6
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.7e-07 60.1 97 44.3
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 6.0e-07 58.9 97 44.3
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 6.0e-07 58.9 97 44.3
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 6.0e-07 58.9 230 31.3
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 6.0e-07 58.9 233 31.3
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 7.8e-07 58.5 200 33.5
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 7.8e-07 58.5 223 28.7
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 7.8e-07 58.5 275 26.2
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 7.8e-07 58.5 137 35.8
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.3e-06 57.0 220 27.7
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 6.6e-06 55.5 146 28.8


User provided reference genes

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